RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 DIRC3C9JPN6 131 aa10.74□□□□□ -0.69
PNKP-221ENST00000627317 M0R2Z0 102 aa10.74□□□□□ -0.69
PNKP-221ENST00000627317 SPRY2O43597 315 aa10.74□□□□□ -0.69
PNKP-221ENST00000627317 IFNA7P01567 189 aa10.74□□□□□ -0.69
PNKP-221ENST00000627317 GIG44P09565 113 aaPredicted RBP10.74□□□□□ -0.69
PNKP-221ENST00000627317 GNG5P63218 68 aa10.74□□□□□ -0.69
PNKP-221ENST00000627317 ERCC8Q13216 396 aa10.74□□□□□ -0.69
PNKP-221ENST00000627317 SPINK13Q1W4C9 94 aa10.74□□□□□ -0.69
PNKP-221ENST00000627317 CST9LP1Q5W188 147 aa10.74□□□□□ -0.69
PNKP-221ENST00000627317 GOLT1AQ6ZVE7 132 aa10.74□□□□□ -0.69
PNKP-221ENST00000627317 ARL6IP6Q8N6S5 226 aa10.74□□□□□ -0.69
PNKP-221ENST00000627317 NKX6-2Q9C056 277 aaPredicted RBP10.74□□□□□ -0.69
PNKP-221ENST00000627317 TP53TG1Q9Y2A0 90 aa10.74□□□□□ -0.69
PNKP-221ENST00000627317 RBAKDNA6NC62 111 aa10.73□□□□□ -0.69
PNKP-221ENST00000627317 TSPOP30536 169 aa10.73□□□□□ -0.69
PNKP-221ENST00000627317 LEPP41159 167 aa10.73□□□□□ -0.69
PNKP-221ENST00000627317 BLOC1S1P78537 153 aa10.73□□□□□ -0.69
PNKP-221ENST00000627317 CASC10Q5T4H9 136 aa10.73□□□□□ -0.69
PNKP-221ENST00000627317 C9orf47Q6ZRZ4 202 aa10.73□□□□□ -0.69
PNKP-221ENST00000627317 RNF183Q96D59 192 aa10.73□□□□□ -0.69
PNKP-221ENST00000627317 LINC00477Q96M19 166 aa10.73□□□□□ -0.69
PNKP-221ENST00000627317 ODF3Q96PU9 254 aa10.73□□□□□ -0.69
PNKP-221ENST00000627317 VGLL1Q99990 258 aa10.73□□□□□ -0.69
PNKP-221ENST00000627317 AGPAT4-IT1Q9H0P7 198 aa10.73□□□□□ -0.69
PNKP-221ENST00000627317 MANBALQ9NQG1 85 aa10.73□□□□□ -0.69
PNKP-221ENST00000627317 GNG13Q9P2W3 67 aa10.73□□□□□ -0.69
PNKP-221ENST00000627317 SERTM2A0A1B0GWG4 89 aa10.72□□□□□ -0.69
PNKP-221ENST00000627317 K7EQM0 130 aa10.72□□□□□ -0.69
PNKP-221ENST00000627317 PAGE4O60829 102 aa10.72□□□□□ -0.69
PNKP-221ENST00000627317 INSP01308 110 aa10.72□□□□□ -0.69
PNKP-221ENST00000627317 CT45A10P0DMU9 189 aa10.72□□□□□ -0.69
PNKP-221ENST00000627317 OVOL2Q9BRP0 275 aa10.72□□□□□ -0.69
PNKP-221ENST00000627317 EPDR1Q9UM22 224 aa10.72□□□□□ -0.69
PNKP-221ENST00000627317 TENM2Q9NT68 2774 aa10.72□□□□□ -0.69
PNKP-221ENST00000627317 IFNA1P01562 189 aa10.71□□□□□ -0.69
PNKP-221ENST00000627317 TCRAP04437 139 aa10.71□□□□□ -0.69
PNKP-221ENST00000627317 CDKN1BP46527 198 aa10.71□□□□□ -0.69
PNKP-221ENST00000627317 ZNF138P52744 262 aa10.71□□□□□ -0.69
PNKP-221ENST00000627317 CCL20P78556 96 aa10.71□□□□□ -0.69
PNKP-221ENST00000627317 TEX261Q6UWH6 196 aa10.71□□□□□ -0.69
PNKP-221ENST00000627317 CYB561D1Q8N8Q1 229 aa10.71□□□□□ -0.69
PNKP-221ENST00000627317 Q8TAT8 98 aa10.71□□□□□ -0.69
PNKP-221ENST00000627317 IGF2BP2-AS1Q96M15 143 aa10.71□□□□□ -0.69
PNKP-221ENST00000627317 ATG101Q9BSB4 218 aa10.71□□□□□ -0.69
PNKP-221ENST00000627317 GOLT1BQ9Y3E0 138 aa10.71□□□□□ -0.69
PNKP-221ENST00000627317 LYSTQ99698 3801 aa10.7□□□□□ -0.7
PNKP-221ENST00000627317 TRAV12-2A0A075B6T6 113 aa10.7□□□□□ -0.7
PNKP-221ENST00000627317 J3KRW8 73 aa10.7□□□□□ -0.7
PNKP-221ENST00000627317 PEX7O00628 323 aa10.7□□□□□ -0.7
PNKP-221ENST00000627317 ATP5G3P48201 142 aa10.7□□□□□ -0.7
PNKP-221ENST00000627317 OR11H2Q8NH07 326 aa10.7□□□□□ -0.7
PNKP-221ENST00000627317 RARRES2Q99969 163 aa10.7□□□□□ -0.7
PNKP-221ENST00000627317 TCEAL7Q9BRU2 100 aa10.7□□□□□ -0.7
PNKP-221ENST00000627317 TMEM208Q9BTX3 173 aa10.7□□□□□ -0.7
PNKP-221ENST00000627317 ZNF492Q9P255 531 aa10.7□□□□□ -0.7
PNKP-221ENST00000627317 IGHV3OR16-12A0A075B7B8 117 aa10.69□□□□□ -0.7
PNKP-221ENST00000627317 TRAV8-1A0A0A6YYK1 113 aa10.69□□□□□ -0.7
PNKP-221ENST00000627317 C11orf94C9JXX5 98 aa10.69□□□□□ -0.7
PNKP-221ENST00000627317 F6UZH7 168 aa10.69□□□□□ -0.7
PNKP-221ENST00000627317 CSNK1G2-AS1Q8NCQ2 148 aa10.69□□□□□ -0.7
PNKP-221ENST00000627317 ZNF680Q8NEM1 530 aa10.69□□□□□ -0.7
PNKP-221ENST00000627317 HIST1H2BAQ96A08 127 aa10.69□□□□□ -0.7
PNKP-221ENST00000627317 RYR2Q92736 4967 aa10.69□□□□□ -0.7
PNKP-221ENST00000627317 CRXO43186 299 aaPredicted RBP10.68□□□□□ -0.7
PNKP-221ENST00000627317 GFI1BQ5VTD9 330 aa10.68□□□□□ -0.7
PNKP-221ENST00000627317 NDFIP1Q9BT67 221 aa10.68□□□□□ -0.7
PNKP-221ENST00000627317 LENEPQ9Y5L5 61 aa10.68□□□□□ -0.7
PNKP-221ENST00000627317 TRBV7-9A0A0J9YWB2 115 aa10.67□□□□□ -0.7
PNKP-221ENST00000627317 FBLL1A6NHQ2 334 aaKnown RBP10.67□□□□□ -0.7
PNKP-221ENST00000627317 GPX1P07203 203 aa10.67□□□□□ -0.7
PNKP-221ENST00000627317 BCL2P10415 239 aa10.67□□□□□ -0.7
PNKP-221ENST00000627317 CRISP2P16562 243 aa10.67□□□□□ -0.7
PNKP-221ENST00000627317 FLI1Q01543 452 aaPredicted RBP10.67□□□□□ -0.7
PNKP-221ENST00000627317 CCDC28AQ8IWP9 274 aa10.67□□□□□ -0.7
PNKP-221ENST00000627317 TMEM75Q8N9X5 138 aa10.67□□□□□ -0.7
PNKP-221ENST00000627317 FAM19A4Q96LR4 140 aa10.67□□□□□ -0.7
PNKP-221ENST00000627317 SGK494Q96LW2 274 aa10.67□□□□□ -0.7
PNKP-221ENST00000627317 SACSQ9NZJ4 4579 aa10.66□□□□□ -0.7
PNKP-221ENST00000627317 C7orf71A4D174 169 aa10.66□□□□□ -0.7
PNKP-221ENST00000627317 KLLNB2CW77 178 aa10.66□□□□□ -0.7
PNKP-221ENST00000627317 NMBP08949 121 aa10.66□□□□□ -0.7
PNKP-221ENST00000627317 TAGLN2P37802 199 aaKnown RBP10.66□□□□□ -0.7
PNKP-221ENST00000627317 AKR1C3P42330 323 aa10.66□□□□□ -0.7
PNKP-221ENST00000627317 PMS2P11Q13670 270 aa10.66□□□□□ -0.7
PNKP-221ENST00000627317 KIR3DS1Q14943 382 aa10.66□□□□□ -0.7
PNKP-221ENST00000627317 ZNF705AQ6ZN79 300 aaPredicted RBP10.66□□□□□ -0.7
PNKP-221ENST00000627317 PRNTQ86SH4 94 aa10.66□□□□□ -0.7
PNKP-221ENST00000627317 C1orf158Q8N1D5 194 aa10.66□□□□□ -0.7
PNKP-221ENST00000627317 TMEM256Q8N2U0 113 aa10.66□□□□□ -0.7
PNKP-221ENST00000627317 ZFAND2AQ8N6M9 145 aa10.66□□□□□ -0.7
PNKP-221ENST00000627317 C20orf144Q9BQM9 153 aa10.66□□□□□ -0.7
PNKP-221ENST00000627317 TXNDC17Q9BRA2 123 aa10.66□□□□□ -0.7
PNKP-221ENST00000627317 NIPSNAP3BQ9BS92 247 aa10.66□□□□□ -0.7
PNKP-221ENST00000627317 PSG8Q9UQ74 426 aa10.66□□□□□ -0.7
PNKP-221ENST00000627317 TRAV12-3A0A0B4J271 114 aa10.65□□□□□ -0.7
PNKP-221ENST00000627317 TRAV34A0A0B4J273 112 aa10.65□□□□□ -0.7
PNKP-221ENST00000627317 SCO2A0A1W2PP80 73 aa10.65□□□□□ -0.7
PNKP-221ENST00000627317 MIFP14174 115 aa10.65□□□□□ -0.7
PNKP-221ENST00000627317 RNASE4P34096 147 aaKnown RBP10.65□□□□□ -0.7
PNKP-221ENST00000627317 UBE2G1P62253 170 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms