RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 EIF5AL1Q6IS14 154 aaKnown RBP10.1□□□□□ -0.79
SNRPA1-216ENST00000626000 BAP18Q8IXM2 172 aa10.1□□□□□ -0.79
SNRPA1-216ENST00000626000 STOML3Q8TAV4 291 aa10.1□□□□□ -0.79
SNRPA1-216ENST00000626000 TMED6Q8WW62 240 aa10.1□□□□□ -0.79
SNRPA1-216ENST00000626000 LINC01587Q99440 93 aa10.1□□□□□ -0.79
SNRPA1-216ENST00000626000 NIPSNAP3BQ9BS92 247 aa10.1□□□□□ -0.79
SNRPA1-216ENST00000626000 NKX6-2Q9C056 277 aaPredicted RBP10.1□□□□□ -0.79
SNRPA1-216ENST00000626000 FBLL1A6NHQ2 334 aaKnown RBP10.09□□□□□ -0.79
SNRPA1-216ENST00000626000 SMLR1H3BR10 107 aa10.09□□□□□ -0.79
SNRPA1-216ENST00000626000 CRISP2P16562 243 aa10.09□□□□□ -0.79
SNRPA1-216ENST00000626000 GCHFRP30047 84 aa10.09□□□□□ -0.79
SNRPA1-216ENST00000626000 ZNF138P52744 262 aa10.09□□□□□ -0.79
SNRPA1-216ENST00000626000 PMS2P11Q13670 270 aa10.09□□□□□ -0.79
SNRPA1-216ENST00000626000 AKAP14Q86UN6 197 aa10.09□□□□□ -0.79
SNRPA1-216ENST00000626000 CCDC28AQ8IWP9 274 aa10.09□□□□□ -0.79
SNRPA1-216ENST00000626000 SUN5Q8TC36 379 aa10.09□□□□□ -0.79
SNRPA1-216ENST00000626000 PHLDA1Q8WV24 401 aaPredicted RBP10.09□□□□□ -0.79
SNRPA1-216ENST00000626000 C16orf74Q96GX8 76 aa10.09□□□□□ -0.79
SNRPA1-216ENST00000626000 HYLS1Q96M11 299 aa10.09□□□□□ -0.79
SNRPA1-216ENST00000626000 PYGO2Q9BRQ0 406 aa10.09□□□□□ -0.79
SNRPA1-216ENST00000626000 ZNF471Q9BX82 626 aaPredicted RBP10.09□□□□□ -0.79
SNRPA1-216ENST00000626000 CYTL1Q9NRR1 136 aa10.09□□□□□ -0.79
SNRPA1-216ENST00000626000 TRAV12-2A0A075B6T6 113 aa10.08□□□□□ -0.8
SNRPA1-216ENST00000626000 TRAV10A0A0B4J240 114 aa10.08□□□□□ -0.8
SNRPA1-216ENST00000626000 DEFB4AO15263 64 aa10.08□□□□□ -0.8
SNRPA1-216ENST00000626000 CT45A10P0DMU9 189 aa10.08□□□□□ -0.8
SNRPA1-216ENST00000626000 TPT1P13693 172 aaKnown RBP10.08□□□□□ -0.8
SNRPA1-216ENST00000626000 DPPA3Q6W0C5 159 aa10.08□□□□□ -0.8
SNRPA1-216ENST00000626000 C5orf17Q8NAS9 161 aa10.08□□□□□ -0.8
SNRPA1-216ENST00000626000 ST6GAL2Q96JF0 529 aa10.08□□□□□ -0.8
SNRPA1-216ENST00000626000 ZNF492Q9P255 531 aa10.08□□□□□ -0.8
SNRPA1-216ENST00000626000 A0A1W2PRE2 83 aa10.07□□□□□ -0.8
SNRPA1-216ENST00000626000 C7orf71A4D174 169 aa10.07□□□□□ -0.8
SNRPA1-216ENST00000626000 PGPA6NDG6 321 aa10.07□□□□□ -0.8
SNRPA1-216ENST00000626000 LYRM9A8MSI8 78 aa10.07□□□□□ -0.8
SNRPA1-216ENST00000626000 KLLNB2CW77 178 aa10.07□□□□□ -0.8
SNRPA1-216ENST00000626000 DIRC3C9JPN6 131 aa10.07□□□□□ -0.8
SNRPA1-216ENST00000626000 C1QBP02746 253 aa10.07□□□□□ -0.8
SNRPA1-216ENST00000626000 NANOS2P60321 138 aaKnown RBP10.07□□□□□ -0.8
SNRPA1-216ENST00000626000 GFI1BQ5VTD9 330 aa10.07□□□□□ -0.8
SNRPA1-216ENST00000626000 OR11H4Q8NGC9 324 aa10.07□□□□□ -0.8
SNRPA1-216ENST00000626000 TMEM263Q8WUH6 116 aaKnown RBP10.07□□□□□ -0.8
SNRPA1-216ENST00000626000 FAM19A4Q96LR4 140 aa10.07□□□□□ -0.8
SNRPA1-216ENST00000626000 AGPAT4-IT1Q9H0P7 198 aa10.07□□□□□ -0.8
SNRPA1-216ENST00000626000 DNAH7Q8WXX0 4024 aa10.07□□□□□ -0.8
SNRPA1-216ENST00000626000 IGKV2-40A0A087WW87 121 aaPredicted RBP10.06□□□□□ -0.8
SNRPA1-216ENST00000626000 IGKV2D-40P01614 121 aaPredicted RBP10.06□□□□□ -0.8
SNRPA1-216ENST00000626000 GPX1P07203 203 aa10.06□□□□□ -0.8
SNRPA1-216ENST00000626000 TMUB2Q71RG4 321 aa10.06□□□□□ -0.8
SNRPA1-216ENST00000626000 C2CD4CQ8TF44 421 aa10.06□□□□□ -0.8
SNRPA1-216ENST00000626000 LINC00467Q9BRT7 94 aa10.06□□□□□ -0.8
SNRPA1-216ENST00000626000 TCEAL7Q9BRU2 100 aa10.06□□□□□ -0.8
SNRPA1-216ENST00000626000 NDFIP1Q9BT67 221 aa10.06□□□□□ -0.8
SNRPA1-216ENST00000626000 DKK2Q9UBU2 259 aa10.06□□□□□ -0.8
SNRPA1-216ENST00000626000 YTHDF2Q9Y5A9 579 aaKnown RBP10.06□□□□□ -0.8
SNRPA1-216ENST00000626000 ARL2-SNX15V9GYD0 113 aa10.06□□□□□ -0.8
SNRPA1-216ENST00000626000 HMGB3O15347 200 aaKnown RBP10.05□□□□□ -0.8
SNRPA1-216ENST00000626000 RAB5CP51148 216 aa10.05□□□□□ -0.8
SNRPA1-216ENST00000626000 EMP1P54849 157 aa10.05□□□□□ -0.8
SNRPA1-216ENST00000626000 LGALSLQ3ZCW2 172 aaPredicted RBP10.05□□□□□ -0.8
SNRPA1-216ENST00000626000 IQCF2Q8IXL9 164 aa10.05□□□□□ -0.8
SNRPA1-216ENST00000626000 ZNF680Q8NEM1 530 aa10.05□□□□□ -0.8
SNRPA1-216ENST00000626000 FAM210BQ96KR6 192 aa10.05□□□□□ -0.8
SNRPA1-216ENST00000626000 TRAV12-3A0A0B4J271 114 aa10.04□□□□□ -0.8
SNRPA1-216ENST00000626000 MAP1LC3B2A6NCE7 125 aa10.04□□□□□ -0.8
SNRPA1-216ENST00000626000 ERCC8Q13216 396 aa10.04□□□□□ -0.8
SNRPA1-216ENST00000626000 FAM222AQ5U5X8 452 aa10.04□□□□□ -0.8
SNRPA1-216ENST00000626000 VGLL1Q99990 258 aa10.04□□□□□ -0.8
SNRPA1-216ENST00000626000 MAP1LC3BQ9GZQ8 125 aa10.04□□□□□ -0.8
SNRPA1-216ENST00000626000 TIMM8BQ9Y5J9 83 aaPredicted RBP10.04□□□□□ -0.8
SNRPA1-216ENST00000626000 KMT2CQ8NEZ4 4911 aaKnown RBP10.04□□□□□ -0.8
SNRPA1-216ENST00000626000 LCE6AA0A183 80 aa10.03□□□□□ -0.8
SNRPA1-216ENST00000626000 ZNF705GA8MUZ8 300 aaPredicted RBP10.03□□□□□ -0.8
SNRPA1-216ENST00000626000 SNURFLB1AK76 121 aa10.03□□□□□ -0.8
SNRPA1-216ENST00000626000 TEX46H3BTG2 121 aa10.03□□□□□ -0.8
SNRPA1-216ENST00000626000 PPT1P50897 306 aa10.03□□□□□ -0.8
SNRPA1-216ENST00000626000 ZFAND2AQ8N6M9 145 aa10.03□□□□□ -0.8
SNRPA1-216ENST00000626000 RNASE8Q8TDE3 154 aaKnown RBP10.03□□□□□ -0.8
SNRPA1-216ENST00000626000 ATG101Q9BSB4 218 aa10.03□□□□□ -0.8
SNRPA1-216ENST00000626000 DEFB131BA0A096LNP1 70 aa10.02□□□□□ -0.81
SNRPA1-216ENST00000626000 F6UZH7 168 aa10.02□□□□□ -0.81
SNRPA1-216ENST00000626000 TCRAP04437 139 aa10.02□□□□□ -0.81
SNRPA1-216ENST00000626000 HTN1P15515 57 aa10.02□□□□□ -0.81
SNRPA1-216ENST00000626000 RNASE4P34096 147 aaKnown RBP10.02□□□□□ -0.81
SNRPA1-216ENST00000626000 FHITP49789 147 aa10.02□□□□□ -0.81
SNRPA1-216ENST00000626000 DAD1P61803 113 aa10.02□□□□□ -0.81
SNRPA1-216ENST00000626000 ZNF726P1Q15940 193 aa10.02□□□□□ -0.81
SNRPA1-216ENST00000626000 C12orf74Q32Q52 190 aa10.02□□□□□ -0.81
SNRPA1-216ENST00000626000 ANXA2RQ3ZCQ2 193 aa10.02□□□□□ -0.81
SNRPA1-216ENST00000626000 Q6ZTC4 211 aa10.02□□□□□ -0.81
SNRPA1-216ENST00000626000 GOLT1AQ6ZVE7 132 aa10.02□□□□□ -0.81
SNRPA1-216ENST00000626000 SLC51BQ86UW2 128 aa10.02□□□□□ -0.81
SNRPA1-216ENST00000626000 EIF4E3Q8N5X7 224 aaKnown RBP10.02□□□□□ -0.81
SNRPA1-216ENST00000626000 CYB561D1Q8N8Q1 229 aa10.02□□□□□ -0.81
SNRPA1-216ENST00000626000 HIST1H2BAQ96A08 127 aa10.02□□□□□ -0.81
SNRPA1-216ENST00000626000 RPH3ALQ9UNE2 315 aa10.02□□□□□ -0.81
SNRPA1-216ENST00000626000 CELA1Q9UNI1 258 aa10.02□□□□□ -0.81
SNRPA1-216ENST00000626000 J3KRW8 73 aa10.01□□□□□ -0.81
SNRPA1-216ENST00000626000 RGS13O14921 159 aa10.01□□□□□ -0.81
SNRPA1-216ENST00000626000 EIF3GO75821 320 aaKnown RBP eCLIP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms