RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 SMCO4Q9NRQ5 59 aa8.83□□□□□ -1
LINC00963-220ENST00000625171 ZNF492Q9P255 531 aa8.83□□□□□ -1
LINC00963-220ENST00000625171 TRAV34A0A0B4J273 112 aa8.82□□□□□ -1
LINC00963-220ENST00000625171 A0A1W2PRX2 142 aa8.82□□□□□ -1
LINC00963-220ENST00000625171 NPIPB6E9PJ23 425 aa8.82□□□□□ -1
LINC00963-220ENST00000625171 DNASE2O00115 360 aaPredicted RBP8.82□□□□□ -1
LINC00963-220ENST00000625171 CMC4P56277 68 aaPredicted RBP8.82□□□□□ -1
LINC00963-220ENST00000625171 RPL11P62913 178 aaKnown RBP8.82□□□□□ -1
LINC00963-220ENST00000625171 RNF212Q495C1 297 aa8.82□□□□□ -1
LINC00963-220ENST00000625171 WFDC9Q8NEX5 89 aa8.82□□□□□ -1
LINC00963-220ENST00000625171 PRR25Q96S07 402 aa8.82□□□□□ -1
LINC00963-220ENST00000625171 C19orf71A6NCJ1 209 aa8.81□□□□□ -1
LINC00963-220ENST00000625171 ZNF705FA8MVS1 300 aaPredicted RBP8.81□□□□□ -1
LINC00963-220ENST00000625171 IGLV1-51P01701 117 aa8.81□□□□□ -1
LINC00963-220ENST00000625171 HLA-DMBP28068 263 aa8.81□□□□□ -1
LINC00963-220ENST00000625171 CT83Q5H943 113 aa8.81□□□□□ -1
LINC00963-220ENST00000625171 RBPMS2Q6ZRY4 209 aaKnown RBP8.81□□□□□ -1
LINC00963-220ENST00000625171 TMEM61Q8N0U2 210 aa8.81□□□□□ -1
LINC00963-220ENST00000625171 RNF182Q8N6D2 247 aa8.81□□□□□ -1
LINC00963-220ENST00000625171 C20orf173Q96LM9 149 aa8.81□□□□□ -1
LINC00963-220ENST00000625171 FAM19A4Q96LR4 140 aa8.81□□□□□ -1
LINC00963-220ENST00000625171 CLUHP3Q96NS8 147 aa8.81□□□□□ -1
LINC00963-220ENST00000625171 ODF3Q96PU9 254 aa8.81□□□□□ -1
LINC00963-220ENST00000625171 AGPAT4-IT1Q9H0P7 198 aa8.81□□□□□ -1
LINC00963-220ENST00000625171 TRRAPQ9Y4A5 3859 aa8.81□□□□□ -1
LINC00963-220ENST00000625171 TRAV8-1A0A0A6YYK1 113 aa8.8□□□□□ -1
LINC00963-220ENST00000625171 FAM231BA6NCW3 169 aa8.8□□□□□ -1
LINC00963-220ENST00000625171 PGPEP1LA6NFU8 196 aa8.8□□□□□ -1
LINC00963-220ENST00000625171 OR4C46A6NHA9 309 aa8.8□□□□□ -1
LINC00963-220ENST00000625171 A8MTW9 85 aa8.8□□□□□ -1
LINC00963-220ENST00000625171 PRAC2D3DTV9 90 aa8.8□□□□□ -1
LINC00963-220ENST00000625171 ZNF138P52744 262 aa8.8□□□□□ -1
LINC00963-220ENST00000625171 NSUN5P1Q3KNT7 163 aa8.8□□□□□ -1
LINC00963-220ENST00000625171 IGFL4Q6B9Z1 124 aa8.8□□□□□ -1
LINC00963-220ENST00000625171 APRG1Q8IVJ8 170 aa8.8□□□□□ -1
LINC00963-220ENST00000625171 C15orf54Q8N8G6 183 aa8.8□□□□□ -1
LINC00963-220ENST00000625171 OR8A1Q8NGG7 326 aa8.8□□□□□ -1
LINC00963-220ENST00000625171 OR10G8Q8NGN5 311 aa8.8□□□□□ -1
LINC00963-220ENST00000625171 OR10J6PQ8NGY7 276 aa8.8□□□□□ -1
LINC00963-220ENST00000625171 DYNLRB2Q8TF09 96 aa8.8□□□□□ -1
LINC00963-220ENST00000625171 VGLL1Q99990 258 aa8.8□□□□□ -1
LINC00963-220ENST00000625171 ZNF256Q9Y2P7 627 aaPredicted RBP8.8□□□□□ -1
LINC00963-220ENST00000625171 TRAV9-1A0A075B6T8 112 aa8.79□□□□□ -1
LINC00963-220ENST00000625171 IGKV2-40A0A087WW87 121 aaPredicted RBP8.79□□□□□ -1
LINC00963-220ENST00000625171 H7BYZ3 331 aa8.79□□□□□ -1
LINC00963-220ENST00000625171 IGKV2D-40P01614 121 aaPredicted RBP8.79□□□□□ -1
LINC00963-220ENST00000625171 PFN1P07737 140 aaKnown RBP8.79□□□□□ -1
LINC00963-220ENST00000625171 CRISP2P16562 243 aa8.79□□□□□ -1
LINC00963-220ENST00000625171 BTN1A1Q13410 526 aa8.79□□□□□ -1
LINC00963-220ENST00000625171 CD300EQ496F6 205 aaPredicted RBP8.79□□□□□ -1
LINC00963-220ENST00000625171 TMEM78Q5T7P6 136 aa8.79□□□□□ -1
LINC00963-220ENST00000625171 SHISA2Q6UWI4 295 aa8.79□□□□□ -1
LINC00963-220ENST00000625171 PRNTQ86SH4 94 aa8.79□□□□□ -1
LINC00963-220ENST00000625171 ZNF738Q8NE65 137 aa8.79□□□□□ -1
LINC00963-220ENST00000625171 OR4B1Q8NGF8 309 aa8.79□□□□□ -1
LINC00963-220ENST00000625171 BTF3L4Q96K17 158 aa8.79□□□□□ -1
LINC00963-220ENST00000625171 YPEL4Q96NS1 127 aa8.79□□□□□ -1
LINC00963-220ENST00000625171 PYGO2Q9BRQ0 406 aa8.79□□□□□ -1
LINC00963-220ENST00000625171 NDFIP1Q9BT67 221 aa8.79□□□□□ -1
LINC00963-220ENST00000625171 RPH3ALQ9UNE2 315 aa8.79□□□□□ -1
LINC00963-220ENST00000625171 V9GYV3 84 aa8.79□□□□□ -1
LINC00963-220ENST00000625171 A0A0J9YX75 114 aa8.78□□□□□ -1
LINC00963-220ENST00000625171 SCO1O75880 301 aa8.78□□□□□ -1
LINC00963-220ENST00000625171 PF4P02776 101 aa8.78□□□□□ -1
LINC00963-220ENST00000625171 FOXA3P55318 350 aaPredicted RBP8.78□□□□□ -1
LINC00963-220ENST00000625171 ERVFC1-1P60608 527 aa8.78□□□□□ -1
LINC00963-220ENST00000625171 IBA57Q5T440 356 aaKnown RBP8.78□□□□□ -1
LINC00963-220ENST00000625171 HIST2H2BDQ6DRA6 164 aa8.78□□□□□ -1
LINC00963-220ENST00000625171 FOXI2Q6ZQN5 318 aa8.78□□□□□ -1
LINC00963-220ENST00000625171 NUDT10Q8NFP7 164 aa8.78□□□□□ -1
LINC00963-220ENST00000625171 NUDT11Q96G61 164 aa8.78□□□□□ -1
LINC00963-220ENST00000625171 ASCL2Q99929 193 aa8.78□□□□□ -1
LINC00963-220ENST00000625171 MCRIP2Q9BUT9 160 aaKnown RBP8.78□□□□□ -1
LINC00963-220ENST00000625171 TRBV24-1A0A075B6N3 115 aa8.77□□□□□ -1.01
LINC00963-220ENST00000625171 DUSP14O95147 198 aaKnown RBP8.77□□□□□ -1.01
LINC00963-220ENST00000625171 DEFA6Q01524 100 aa8.77□□□□□ -1.01
LINC00963-220ENST00000625171 OR5I1Q13606 314 aa8.77□□□□□ -1.01
LINC00963-220ENST00000625171 BEAN1Q3B7T3 259 aa8.77□□□□□ -1.01
LINC00963-220ENST00000625171 SMUG1Q53HV7 270 aa8.77□□□□□ -1.01
LINC00963-220ENST00000625171 GBGT1Q8N5D6 347 aa8.77□□□□□ -1.01
LINC00963-220ENST00000625171 SGK494Q96LW2 274 aa8.77□□□□□ -1.01
LINC00963-220ENST00000625171 GFRA4Q9GZZ7 299 aa8.77□□□□□ -1.01
LINC00963-220ENST00000625171 SAV1Q9H4B6 383 aaPredicted RBP8.77□□□□□ -1.01
LINC00963-220ENST00000625171 COLCA2A8K830 154 aa8.76□□□□□ -1.01
LINC00963-220ENST00000625171 FABP5P3A8MUU1 101 aa8.76□□□□□ -1.01
LINC00963-220ENST00000625171 SAP30O75446 220 aa8.76□□□□□ -1.01
LINC00963-220ENST00000625171 CT45A10P0DMU9 189 aa8.76□□□□□ -1.01
LINC00963-220ENST00000625171 MGST1P10620 155 aaKnown RBP8.76□□□□□ -1.01
LINC00963-220ENST00000625171 CRIP1P50238 77 aa8.76□□□□□ -1.01
LINC00963-220ENST00000625171 ELOBQ15370 118 aa8.76□□□□□ -1.01
LINC00963-220ENST00000625171 C9orf66Q5T8R8 295 aa8.76□□□□□ -1.01
LINC00963-220ENST00000625171 EBLN2Q6P2I7 272 aa8.76□□□□□ -1.01
LINC00963-220ENST00000625171 LINC00322Q6ZN03 302 aaPredicted RBP8.76□□□□□ -1.01
LINC00963-220ENST00000625171 FAM24BQ8N5W8 94 aa8.76□□□□□ -1.01
LINC00963-220ENST00000625171 DAZAP1Q96EP5 407 aaKnown RBP8.76□□□□□ -1.01
LINC00963-220ENST00000625171 ZC2HC1AQ96GY0 325 aa8.76□□□□□ -1.01
LINC00963-220ENST00000625171 AURKAIP1Q9NWT8 199 aaPredicted RBP8.76□□□□□ -1.01
LINC00963-220ENST00000625171 IL36BQ9NZH7 164 aa8.76□□□□□ -1.01
LINC00963-220ENST00000625171 IGKV3-7A0A075B6H7 116 aa8.75□□□□□ -1.01
LINC00963-220ENST00000625171 SMIM27A0A1W2PRY6 76 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms