RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 IGHV3OR16-10A0A075B7F0 116 aa6.43□□□□□ -1.38
SND1-IT1-201ENST00000623342 C20orf202A1L168 122 aa6.43□□□□□ -1.38
SND1-IT1-201ENST00000623342 ZNF138P52744 262 aa6.43□□□□□ -1.38
SND1-IT1-201ENST00000623342 ATP5G2Q06055 141 aa6.43□□□□□ -1.38
SND1-IT1-201ENST00000623342 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.43□□□□□ -1.38
SND1-IT1-201ENST00000623342 CCL19Q99731 98 aa6.43□□□□□ -1.38
SND1-IT1-201ENST00000623342 SLC50A1Q9BRV3 221 aa6.43□□□□□ -1.38
SND1-IT1-201ENST00000623342 NF1P21359 2839 aa6.43□□□□□ -1.38
SND1-IT1-201ENST00000623342 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.43□□□□□ -1.38
SND1-IT1-201ENST00000623342 TRAV41A0A0B4J266 112 aa6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 IGHV4-61A0A0C4DH41 118 aa6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 SYS1-DBNDD2H3BUS1 97 aa6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 CSN3P07498 182 aa6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 ZNF80P51504 273 aaPredicted RBP6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 SRSF2Q01130 221 aaKnown RBP6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 MAJINQ3KP22 176 aa6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 SPATA12Q7Z6I5 190 aa6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 C10orf105Q8TEF2 133 aa6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 METTL26Q96S19 204 aa6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 ATP6V0BQ99437 205 aa6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 IGHV3-66A0A0C4DH42 116 aa6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 RBAKDNA6NC62 111 aa6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 NDUFS8O00217 210 aa6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 TCAPO15273 167 aa6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 CRIP2P52943 208 aaPredicted RBP6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 C19orf54Q5BKX5 351 aa6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 BRD3OSQ6XYD6 125 aa6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 Q6ZN92 141 aa6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 LINC00173Q6ZV60 143 aa6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 PIFOQ8TCI5 191 aa6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 MEGF9Q9H1U4 602 aa6.42□□□□□ -1.38
SND1-IT1-201ENST00000623342 TRAV40A0A0B4J280 105 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 TMEM213A2RRL7 107 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 FAM223BA6NKX1 122 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 PRAC2D3DTV9 90 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 RPLP1P05386 114 aaKnown RBP6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 HNRNPA3P51991 378 aaKnown RBP6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 ERCC8Q13216 396 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 FAM104BQ5XKR9 115 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 FAM223AQ8IWN6 122 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 RNF182Q8N6D2 247 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 FER1L6-AS1Q8NA97 138 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 MAP1LC3CQ9BXW4 147 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 AP5S1Q9NUS5 200 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 HSPB8Q9UJY1 196 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 U3KQK5 164 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 OR4C46A6NHA9 309 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 FABP5P3A8MUU1 101 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 IGLC6P0CF74 106 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 CLEC2AQ6UVW9 174 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 FA2HQ7L5A8 372 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 PRSS3P2Q8NHM4 247 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 U3KQE9 123 aa6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 GCN1Q92616 2671 aaKnown RBP6.41□□□□□ -1.38
SND1-IT1-201ENST00000623342 IGHV3OR16-13A0A075B7E8 117 aa6.4□□□□□ -1.38
SND1-IT1-201ENST00000623342 IGHV3-74A0A0B4J1X5 117 aa6.4□□□□□ -1.38
SND1-IT1-201ENST00000623342 D6R8Y8 96 aa6.4□□□□□ -1.38
SND1-IT1-201ENST00000623342 ORM1P02763 201 aa6.4□□□□□ -1.38
SND1-IT1-201ENST00000623342 IGLL1P15814 213 aa6.4□□□□□ -1.38
SND1-IT1-201ENST00000623342 TWIST1Q15672 202 aa6.4□□□□□ -1.38
SND1-IT1-201ENST00000623342 BATFQ16520 125 aa6.4□□□□□ -1.38
SND1-IT1-201ENST00000623342 PET117Q6UWS5 81 aa6.4□□□□□ -1.38
SND1-IT1-201ENST00000623342 AMN1Q8IY45 258 aa6.4□□□□□ -1.38
SND1-IT1-201ENST00000623342 LINC00527Q9UJ94 153 aa6.4□□□□□ -1.38
SND1-IT1-201ENST00000623342 DOPEY2Q9Y3R5 2298 aa6.4□□□□□ -1.38
SND1-IT1-201ENST00000623342 IGHV3-49A0A0A0MS15 119 aa6.4□□□□□ -1.39
SND1-IT1-201ENST00000623342 TRAV8-2A0A0B4J237 113 aa6.4□□□□□ -1.39
SND1-IT1-201ENST00000623342 MUC21A0A0G2JKD1 596 aa6.4□□□□□ -1.39
SND1-IT1-201ENST00000623342 MUC21A0A140T8X8 626 aa6.4□□□□□ -1.39
SND1-IT1-201ENST00000623342 ZNF207O43670 478 aaKnown RBP6.4□□□□□ -1.39
SND1-IT1-201ENST00000623342 TRGV3P03979 118 aa6.4□□□□□ -1.39
SND1-IT1-201ENST00000623342 ATP5J2P56134 94 aa6.4□□□□□ -1.39
SND1-IT1-201ENST00000623342 MUC21Q5SSG8 566 aa6.4□□□□□ -1.39
SND1-IT1-201ENST00000623342 ZNF575Q86XF7 245 aa6.4□□□□□ -1.39
SND1-IT1-201ENST00000623342 ORMDL3Q8N138 153 aa6.4□□□□□ -1.39
SND1-IT1-201ENST00000623342 MRPL53Q96EL3 112 aaKnown RBP6.4□□□□□ -1.39
SND1-IT1-201ENST00000623342 PRELID3AQ96N28 172 aa6.4□□□□□ -1.39
SND1-IT1-201ENST00000623342 TMEM191AQ9H0A3 160 aa6.4□□□□□ -1.39
SND1-IT1-201ENST00000623342 CCDC168Q8NDH2 2452 aa6.4□□□□□ -1.39
SND1-IT1-201ENST00000623342 IGF1P05019 195 aa6.39□□□□□ -1.39
SND1-IT1-201ENST00000623342 IGHV4-38-2P0DP08 117 aa6.39□□□□□ -1.39
SND1-IT1-201ENST00000623342 TSPOP30536 169 aa6.39□□□□□ -1.39
SND1-IT1-201ENST00000623342 LINC01559Q495D7 138 aa6.39□□□□□ -1.39
SND1-IT1-201ENST00000623342 MRPL51Q4U2R6 128 aaKnown RBP6.39□□□□□ -1.39
SND1-IT1-201ENST00000623342 C8orf86Q6ZUL3 223 aa6.39□□□□□ -1.39
SND1-IT1-201ENST00000623342 IL17RELQ6ZVW7 336 aa6.39□□□□□ -1.39
SND1-IT1-201ENST00000623342 OR10AG1Q8NH19 301 aa6.39□□□□□ -1.39
SND1-IT1-201ENST00000623342 ARL3P36405 182 aa6.39□□□□□ -1.39
SND1-IT1-201ENST00000623342 IFI27P40305 119 aaPredicted RBP6.39□□□□□ -1.39
SND1-IT1-201ENST00000623342 COL5A1-AS1Q5SY13 56 aa6.39□□□□□ -1.39
SND1-IT1-201ENST00000623342 PSMG3-AS1Q96PY0 264 aa6.39□□□□□ -1.39
SND1-IT1-201ENST00000623342 CNFNQ9BYD5 112 aa6.39□□□□□ -1.39
SND1-IT1-201ENST00000623342 AGPAT4-IT1Q9H0P7 198 aa6.39□□□□□ -1.39
SND1-IT1-201ENST00000623342 ST20Q9HBF5 79 aa6.39□□□□□ -1.39
SND1-IT1-201ENST00000623342 HIF1ANQ9NWT6 349 aa6.39□□□□□ -1.39
SND1-IT1-201ENST00000623342 SIGLEC8Q9NYZ4 499 aa6.39□□□□□ -1.39
SND1-IT1-201ENST00000623342 LAMTOR2Q9Y2Q5 125 aa6.39□□□□□ -1.39
SND1-IT1-201ENST00000623342 MRPS16Q9Y3D3 137 aaKnown RBP6.39□□□□□ -1.39
SND1-IT1-201ENST00000623342 IGHV4-30-2A0A087WSY4 118 aa6.38□□□□□ -1.39
SND1-IT1-201ENST00000623342 LOC389332A0A1B0GUA5 103 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms