RNA–Protein interactions for RNA: ENST00000623253.4_PAR_Y

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253_PAR_Y SLC17A3O00476 420 aa11.14□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y EREGO14944 169 aa11.14□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y RPL29P47914 159 aaKnown RBP11.14□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y BAXQ07812 192 aa11.14□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y IL15RAQ13261 267 aa11.14□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y RAB32Q13637 225 aa11.14□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y GUK1Q16774 197 aa11.14□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y TMEM252Q8N6L7 170 aa11.14□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y A0A096LPF7 62 aa11.13□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y IGSF23A1L1A6 192 aa11.13□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y H3BQ15 152 aa11.13□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y LEPP41159 167 aa11.13□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y ASAH1Q13510 395 aa11.13□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y ATP6V1FQ16864 119 aa11.13□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y CHAC2Q8WUX2 184 aa11.13□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y SAT2Q96F10 170 aaPredicted RBP11.13□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y VSIG2Q96IQ7 327 aa11.13□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y SLC39A9Q9NUM3 307 aa11.13□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y TRAV5A0A0B4J249 113 aa11.12□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y SIVA1O15304 175 aa11.12□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y ZNF253O75346 499 aa11.12□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y CT45A10P0DMU9 189 aa11.12□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y PYGO2Q9BRQ0 406 aa11.12□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y GSN-AS1Q9NRJ2 163 aa11.12□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y MPDU1O75352 247 aa11.11□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y FGF7P21781 194 aa11.11□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y DAZ2Q13117 558 aaKnown RBP11.11□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y Q6ZRN7 208 aaPredicted RBP11.11□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y ENKURQ8TC29 256 aa11.11□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y ODF3Q96PU9 254 aa11.11□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y GPN1Q9HCN4 374 aaPredicted RBP11.11□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y TRGV1A0A0A0MS02 117 aa11.1□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y ERVFC1-1P60608 527 aa11.1□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y LYPD1Q8N2G4 141 aa11.1□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y TMEM14CQ9P0S9 112 aa11.1□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y FUT9Q9Y231 359 aa11.1□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y TNFRSF18Q9Y5U5 241 aa11.1□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y NXPH4O95158 308 aa11.09□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y MRPL53Q96EL3 112 aaKnown RBP11.09□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y NPCDR1Q9BY65 106 aa11.09□□□□□ -0.63
CD99-211ENST00000623253_PAR_Y TRBV19A0A075B6N1 114 aa11.08□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y NPIPB6E9PJ23 425 aa11.08□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y PAX4O43316 350 aa11.08□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y UPK1BO75841 260 aa11.08□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y IFNA5P01569 189 aa11.08□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y HIST1H1EP10412 219 aaKnown RBP11.08□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y XGP55808 180 aa11.08□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y PDE6HQ13956 83 aa11.08□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y Q5VSD8 79 aa11.08□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y ZNF680Q8NEM1 530 aa11.08□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y FRZBQ92765 325 aa11.08□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y SLC25A31Q9H0C2 315 aa11.08□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y PRELID1Q9Y255 219 aa11.08□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y E5RGE8 158 aa11.07□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y IGHV3-53P01767 116 aa11.07□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y SLC25A5P05141 298 aaKnown RBP11.07□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y CDPF1Q6NVV7 123 aa11.07□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y NMES1Q9C002 83 aa11.07□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y TIMM9Q9Y5J7 89 aa11.07□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y ICOSQ9Y6W8 199 aa11.07□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y C7orf71A4D174 169 aa11.06□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y SIX6O95475 246 aa11.06□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y DNAH10OSP0CZ25 163 aa11.06□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y RNASE4P34096 147 aaKnown RBP11.06□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y NHLH2Q02577 135 aa11.06□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y ERCC8Q13216 396 aa11.06□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y C11orf72Q8NBR9 251 aa11.06□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y OR5C1Q8NGR4 320 aa11.06□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y THAP6Q8TBB0 222 aa11.06□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y KLF12Q9Y4X4 402 aa11.06□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y M0R3E3 92 aa11.05□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y PRAF2O60831 178 aa11.05□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y ZNF324O75467 553 aaPredicted RBP11.05□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y NDUFB4O95168 129 aa11.05□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y PYYP10082 97 aa11.05□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y KRTAP10-1P60331 282 aa11.05□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y CYCSP99999 105 aaKnown RBP11.05□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y CD300CQ08708 224 aa11.05□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y BTN1A1Q13410 526 aa11.05□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y GCSAMLQ5JQS6 135 aa11.05□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y NFE4Q86UQ8 179 aa11.05□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y EIF4E3Q8N5X7 224 aaKnown RBP11.05□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y C18orf15Q96N68 181 aa11.05□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y KCNIP2Q9NS61 270 aa11.05□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y INMT-MINDY4F8WBC2 141 aa11.04□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y SMR3BP02814 79 aaPredicted RBP11.04□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y LRRC37A5PQ49AS3 106 aa11.04□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y BLNKQ8WV28 456 aa11.04□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y LINC00477Q96M19 166 aa11.04□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y SLC25A2Q9BXI2 301 aa11.04□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y AAMDCQ9H7C9 122 aa11.04□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y OR5AC2Q9NZP5 309 aa11.04□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y TRAV9-2A0A087WT02 112 aa11.03□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y A0A087WTM6 91 aa11.03□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y SPINK4O60575 86 aa11.03□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y GPX1P07203 203 aa11.03□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y IFITM3Q01628 133 aa11.03□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y ANXA2RQ3ZCQ2 193 aa11.03□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y LYPD5Q6UWN5 251 aa11.03□□□□□ -0.64
CD99-211ENST00000623253_PAR_Y EXOC3-AS1Q8N2X6 119 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms