RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 NDUFA3O95167 84 aa17.1■□□□□ 0.33
PCSK6-220ENST00000622483 GAFA1Q96PS6 74 aa17.1■□□□□ 0.33
PCSK6-220ENST00000622483 RAI1Q7Z5J4 1906 aaPredicted RBP17.09■□□□□ 0.33
PCSK6-220ENST00000622483 OR4C13Q8NGP0 309 aa17.09■□□□□ 0.33
PCSK6-220ENST00000622483 DCHS2Q6V1P9 2916 aa17.09■□□□□ 0.33
PCSK6-220ENST00000622483 ATP5IP56385 69 aaPredicted RBP17.08■□□□□ 0.33
PCSK6-220ENST00000622483 CCL8P80075 99 aa17.08■□□□□ 0.33
PCSK6-220ENST00000622483 C8orf86Q6ZUL3 223 aa17.08■□□□□ 0.33
PCSK6-220ENST00000622483 IGKV2-40A0A087WW87 121 aaPredicted RBP17.08■□□□□ 0.32
PCSK6-220ENST00000622483 IGKV2D-40P01614 121 aaPredicted RBP17.08■□□□□ 0.32
PCSK6-220ENST00000622483 SPG11Q96JI7 2443 aa17.08■□□□□ 0.32
PCSK6-220ENST00000622483 MRPL16Q9NX20 251 aaKnown RBP17.07■□□□□ 0.32
PCSK6-220ENST00000622483 MRPL35Q9NZE8 188 aaKnown RBP17.07■□□□□ 0.32
PCSK6-220ENST00000622483 TMEM158Q8WZ71 300 aa17.07■□□□□ 0.32
PCSK6-220ENST00000622483 CYSLTR1Q9Y271 337 aa17.07■□□□□ 0.32
PCSK6-220ENST00000622483 MALRD1Q5VYJ5 2156 aa17.07■□□□□ 0.32
PCSK6-220ENST00000622483 PAX8Q06710 450 aa17.07■□□□□ 0.32
PCSK6-220ENST00000622483 NFE4Q86UQ8 179 aa17.07■□□□□ 0.32
PCSK6-220ENST00000622483 TMEM167AQ8TBQ9 72 aa17.07■□□□□ 0.32
PCSK6-220ENST00000622483 MYO18BQ8IUG5 2567 aa17.06■□□□□ 0.32
PCSK6-220ENST00000622483 LOC107984156A0A0G2JMH3 177 aa17.06■□□□□ 0.32
PCSK6-220ENST00000622483 SH2D1AO60880 128 aa17.06■□□□□ 0.32
PCSK6-220ENST00000622483 XGP55808 180 aa17.06■□□□□ 0.32
PCSK6-220ENST00000622483 ARL17AQ8IVW1 177 aa17.06■□□□□ 0.32
PCSK6-220ENST00000622483 IGHV3OR16-8A0A075B7F1 116 aa17.06■□□□□ 0.32
PCSK6-220ENST00000622483 TCTEX1D4Q5JR98 221 aa17.05■□□□□ 0.32
PCSK6-220ENST00000622483 KLK15Q9H2R5 256 aa17.05■□□□□ 0.32
PCSK6-220ENST00000622483 IGLV2-23P01705 113 aa17.05■□□□□ 0.32
PCSK6-220ENST00000622483 ZNF833PQ6ZTB9 187 aa17.05■□□□□ 0.32
PCSK6-220ENST00000622483 IGFBPL1Q8WX77 278 aa17.05■□□□□ 0.32
PCSK6-220ENST00000622483 CDIP1Q9H305 208 aa17.05■□□□□ 0.32
PCSK6-220ENST00000622483 DKK4Q9UBT3 224 aa17.05■□□□□ 0.32
PCSK6-220ENST00000622483 TRGV9Q99603 122 aa17.05■□□□□ 0.32
PCSK6-220ENST00000622483 PRO0461Q9UI25 63 aa17.05■□□□□ 0.32
PCSK6-220ENST00000622483 IGFL2Q6UWQ7 119 aa17.04■□□□□ 0.32
PCSK6-220ENST00000622483 SEM1Q6ZVN7 128 aa17.04■□□□□ 0.32
PCSK6-220ENST00000622483 RNF7Q9UBF6 113 aa17.04■□□□□ 0.32
PCSK6-220ENST00000622483 LHBP01229 141 aa17.04■□□□□ 0.32
PCSK6-220ENST00000622483 TM2D2Q9BX73 214 aa17.04■□□□□ 0.32
PCSK6-220ENST00000622483 TNFAIP6P98066 277 aaPredicted RBP17.03■□□□□ 0.32
PCSK6-220ENST00000622483 FOXI1Q12951 378 aa17.03■□□□□ 0.32
PCSK6-220ENST00000622483 KLF17Q5JT82 389 aaPredicted RBP17.03■□□□□ 0.32
PCSK6-220ENST00000622483 RASL11BQ9BPW5 248 aa17.03■□□□□ 0.32
PCSK6-220ENST00000622483 NGBQ9NPG2 151 aa17.03■□□□□ 0.32
PCSK6-220ENST00000622483 FLNCQ14315 2725 aa17.03■□□□□ 0.32
PCSK6-220ENST00000622483 HIVEP3Q5T1R4 2406 aa17.03■□□□□ 0.32
PCSK6-220ENST00000622483 TRBV19A0A075B6N1 114 aa17.03■□□□□ 0.32
PCSK6-220ENST00000622483 EGR2P11161 476 aaPredicted RBP17.03■□□□□ 0.32
PCSK6-220ENST00000622483 PSMB2P49721 201 aa17.03■□□□□ 0.32
PCSK6-220ENST00000622483 ZNF493Q6ZR52 646 aa17.03■□□□□ 0.32
PCSK6-220ENST00000622483 ANKHD1Q8IWZ3 2542 aaKnown RBP17.03■□□□□ 0.32
PCSK6-220ENST00000622483 PGPEP1Q9NXJ5 209 aa17.03■□□□□ 0.32
PCSK6-220ENST00000622483 CTSZQ9UBR2 303 aa17.03■□□□□ 0.32
PCSK6-220ENST00000622483 CRYBG3Q68DQ2 2970 aa17.02■□□□□ 0.32
PCSK6-220ENST00000622483 SIGLEC15Q6ZMC9 328 aa17.02■□□□□ 0.32
PCSK6-220ENST00000622483 TTC9CQ8N5M4 171 aa17.02■□□□□ 0.32
PCSK6-220ENST00000622483 RAB9BQ9NP90 201 aa17.02■□□□□ 0.32
PCSK6-220ENST00000622483 UTP20O75691 2785 aaKnown RBP17.02■□□□□ 0.32
PCSK6-220ENST00000622483 TRAV26-2A0A0B4J265 109 aa17.02■□□□□ 0.31
PCSK6-220ENST00000622483 DPM2O94777 84 aa17.02■□□□□ 0.31
PCSK6-220ENST00000622483 ORM1P02763 201 aa17.02■□□□□ 0.31
PCSK6-220ENST00000622483 EFNA4P52798 201 aa17.02■□□□□ 0.31
PCSK6-220ENST00000622483 MZT1Q08AG7 82 aa17.02■□□□□ 0.31
PCSK6-220ENST00000622483 RRN3P1Q2M238 152 aa17.02■□□□□ 0.31
PCSK6-220ENST00000622483 MAP1LC3AQ9H492 121 aa17.02■□□□□ 0.31
PCSK6-220ENST00000622483 ZFP2Q6ZN57 461 aa17.01■□□□□ 0.31
PCSK6-220ENST00000622483 Q6ZS92 163 aa17.01■□□□□ 0.31
PCSK6-220ENST00000622483 HIGD1BQ9P298 99 aa17.01■□□□□ 0.31
PCSK6-220ENST00000622483 CEACAM4O75871 244 aa17.01■□□□□ 0.31
PCSK6-220ENST00000622483 RPL27AP46776 148 aaKnown RBP17.01■□□□□ 0.31
PCSK6-220ENST00000622483 SMCPP49901 116 aaPredicted RBP17.01■□□□□ 0.31
PCSK6-220ENST00000622483 ZNF80P51504 273 aaPredicted RBP17.01■□□□□ 0.31
PCSK6-220ENST00000622483 C22orf34Q6ZV56 151 aa17.01■□□□□ 0.31
PCSK6-220ENST00000622483 DEFB104AQ8WTQ1 72 aa17.01■□□□□ 0.31
PCSK6-220ENST00000622483 U3KQK5 164 aa17.01■□□□□ 0.31
PCSK6-220ENST00000622483 B5MCH6 92 aa17.01■□□□□ 0.31
PCSK6-220ENST00000622483 VMA21Q3ZAQ7 101 aa17.01■□□□□ 0.31
PCSK6-220ENST00000622483 IGF2-ASQ6U949 168 aa17.01■□□□□ 0.31
PCSK6-220ENST00000622483 LINC00312Q9Y6C7 94 aa17.01■□□□□ 0.31
PCSK6-220ENST00000622483 IGHG3P01860 377 aa17■□□□□ 0.31
PCSK6-220ENST00000622483 IL4P05112 153 aa17■□□□□ 0.31
PCSK6-220ENST00000622483 H3BVH4 76 aa17■□□□□ 0.31
PCSK6-220ENST00000622483 HLA-DMBP28068 263 aa17■□□□□ 0.31
PCSK6-220ENST00000622483 PRSS29PA6NIE9 313 aa16.99■□□□□ 0.31
PCSK6-220ENST00000622483 FAM90A27PA6NNH2 459 aa16.99■□□□□ 0.31
PCSK6-220ENST00000622483 KIR2DL4Q99706 377 aa16.99■□□□□ 0.31
PCSK6-220ENST00000622483 FAM215AQ9Y5M1 114 aa16.99■□□□□ 0.31
PCSK6-220ENST00000622483 TNFRSF6BO95407 300 aa16.99■□□□□ 0.31
PCSK6-220ENST00000622483 FAM27E3Q08E93 113 aa16.99■□□□□ 0.31
PCSK6-220ENST00000622483 IGSF10Q6WRI0 2623 aa16.99■□□□□ 0.31
PCSK6-220ENST00000622483 IGHV3-35A0A0C4DH35 117 aa16.99■□□□□ 0.31
PCSK6-220ENST00000622483 CRYGCP07315 174 aa16.99■□□□□ 0.31
PCSK6-220ENST00000622483 LY6DQ14210 128 aa16.99■□□□□ 0.31
PCSK6-220ENST00000622483 MRGPRG-AS1Q2M3A8 158 aa16.99■□□□□ 0.31
PCSK6-220ENST00000622483 Q6ZUT4 128 aa16.99■□□□□ 0.31
PCSK6-220ENST00000622483 Q8NA96 180 aa16.99■□□□□ 0.31
PCSK6-220ENST00000622483 PROCRQ9UNN8 238 aa16.99■□□□□ 0.31
PCSK6-220ENST00000622483 A0A1B0GW15 77 aa16.98■□□□□ 0.31
PCSK6-220ENST00000622483 TMEM200BQ69YZ2 307 aa16.98■□□□□ 0.31
PCSK6-220ENST00000622483 FAM208BQ5VWN6 2430 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms