RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 S100A13Q99584 98 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 TAS2R8Q9NYW2 309 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 MPC1Q9Y5U8 109 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 PEAK1Q9H792 1746 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 MARF1Q9Y4F3 1742 aaKnown RBP1.93□□□□□ -2.1
CPNE3-213ENST00000622183 C1orf167Q5SNV9 1468 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 RALGAPBQ86X10 1494 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 PLEKHH2Q8IVE3 1493 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 DIP2CQ9Y2E4 1556 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 PIK3C2AO00443 1686 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 RGPD2P0DJD1 1756 aa1.93□□□□□ -2.1
CPNE3-213ENST00000622183 PLXNA4Q9HCM2 1894 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 MYO3AQ8NEV4 1616 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 MAP3K4Q9Y6R4 1608 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 DOCK2Q92608 1830 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 CHD3Q12873 2000 aaKnown RBP1.92□□□□□ -2.1
CPNE3-213ENST00000622183 hCG_1818297A0A087WSY0 165 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 TRAV4A0A0B4J268 109 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 SPAARA0A1B0GVQ0 90 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 A0A1B0GW64 132 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 IRGMA1A4Y4 181 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 GGT3PA6NGU5 568 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 ZNF860A6NHJ4 632 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 A8MT66 165 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 J3QRK9 145 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 M0R2Z0 102 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 PIRO00625 290 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 PDCD5O14737 125 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 NDUFC2O95298 119 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 NAPSAO96009 420 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 CD2P06729 351 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 CTSDP07339 412 aaPredicted RBP1.92□□□□□ -2.1
CPNE3-213ENST00000622183 IGLC1P0CG04 106 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 PEA15Q15121 130 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 SPANXN3Q5MJ09 141 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 TMEM14EPQ6UXP3 125 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 IZUMO2Q6UXV1 221 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 ZNF431Q8TF32 576 aaPredicted RBP1.92□□□□□ -2.1
CPNE3-213ENST00000622183 SNRNP25Q9BV90 132 aaKnown RBP1.92□□□□□ -2.1
CPNE3-213ENST00000622183 SEC11CQ9BY50 192 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 SMIM3Q9BZL3 60 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 TMEM191AQ9H0A3 160 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 C11orf68Q9H3H3 251 aaKnown RBP1.92□□□□□ -2.1
CPNE3-213ENST00000622183 RERGLQ9H628 205 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 SMCO4Q9NRQ5 59 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 FBXL12Q9NXK8 326 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 CYSLTR1Q9Y271 337 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 NKTRP30414 1462 aaKnown RBP1.92□□□□□ -2.1
CPNE3-213ENST00000622183 ADGRB1O14514 1584 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 MROH2AA6NES4 1674 aa1.92□□□□□ -2.1
CPNE3-213ENST00000622183 EFCAB5A4FU69 1503 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 EFCAB6Q5THR3 1501 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 BIVM-ERCC5R4GMW8 1640 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 ARHGEF28Q8N1W1 1705 aaKnown RBP1.91□□□□□ -2.1
CPNE3-213ENST00000622183 MYLKQ15746 1914 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 RGPD3A6NKT7 1758 aaPredicted RBP1.91□□□□□ -2.1
CPNE3-213ENST00000622183 LAMB1P07942 1786 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 ARFGEF2Q9Y6D5 1785 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 GLI2P10070 1586 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 MAST1Q9Y2H9 1570 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 LAMC3Q9Y6N6 1575 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 TRBV19A0A075B6N1 114 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 A0A087WXM4 84 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 A0A0D9SEW6 157 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 A0A1W2PRS3 328 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 HMSDA8MTL9 139 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 NPFFO15130 113 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 OR2T1O43869 369 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 PMP2P02689 132 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 BCL2P10415 239 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 YPEL3P61236 119 aaPredicted RBP1.91□□□□□ -2.1
CPNE3-213ENST00000622183 IQCJQ1A5X6 159 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 KHDC3LQ587J8 217 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 AADACL3Q5VUY0 350 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 TMEM244Q5VVB8 128 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 Q6ZS92 163 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 GTF2H5Q6ZYL4 71 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 PRR15Q8IV56 129 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 OR5AK2Q8NH90 309 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 PPTC7Q8NI37 304 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 POP5Q969H6 163 aaKnown RBP1.91□□□□□ -2.1
CPNE3-213ENST00000622183 SDF2Q99470 211 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 PRO1933Q9H354 126 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 BANF2Q9H503 90 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 CBLN4Q9NTU7 201 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 KIAA0556O60303 1618 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 CLTCL1P53675 1640 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 NFAT5O94916 1531 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 ABCC1P33527 1531 aa1.91□□□□□ -2.1
CPNE3-213ENST00000622183 SCN10AQ9Y5Y9 1956 aa1.9□□□□□ -2.1
CPNE3-213ENST00000622183 RGPD8O14715 1765 aaPredicted RBP1.9□□□□□ -2.1
CPNE3-213ENST00000622183 RGPD5Q99666 1765 aa1.9□□□□□ -2.1
CPNE3-213ENST00000622183 TOPAZ1Q8N9V7 1692 aa1.9□□□□□ -2.1
CPNE3-213ENST00000622183 SLX4Q8IY92 1834 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 TRBV7-6A0A0J9YX20 115 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 TRDV1A0A1B0GX56 115 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 DPM2O94777 84 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 APOC3P02656 99 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 CD14P08571 375 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 IGLC6P0CF74 106 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms