RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 OR4B1Q8NGF8 309 aa16.25■□□□□ 0.19
SPAST-204ENST00000621856 TSKUQ8WUA8 353 aa16.25■□□□□ 0.19
SPAST-204ENST00000621856 C2orf70A6NJV1 201 aa16.24■□□□□ 0.19
SPAST-204ENST00000621856 M0QZ24 198 aa16.24■□□□□ 0.19
SPAST-204ENST00000621856 SPINK4O60575 86 aa16.24■□□□□ 0.19
SPAST-204ENST00000621856 S100A6P06703 90 aa16.24■□□□□ 0.19
SPAST-204ENST00000621856 CBLN1P23435 193 aa16.24■□□□□ 0.19
SPAST-204ENST00000621856 CT83Q5H943 113 aa16.24■□□□□ 0.19
SPAST-204ENST00000621856 TMEM78Q5T7P6 136 aa16.24■□□□□ 0.19
SPAST-204ENST00000621856 WFDC12Q8WWY7 111 aa16.24■□□□□ 0.19
SPAST-204ENST00000621856 IZUMO1RA6ND01 250 aa16.23■□□□□ 0.19
SPAST-204ENST00000621856 A8MWL6 223 aa16.23■□□□□ 0.19
SPAST-204ENST00000621856 NDUFA7O95182 113 aa16.23■□□□□ 0.19
SPAST-204ENST00000621856 OR2D3Q8NGH3 330 aa16.23■□□□□ 0.19
SPAST-204ENST00000621856 A0A1W2PRX2 142 aa16.22■□□□□ 0.19
SPAST-204ENST00000621856 NPIPB6E9PJ23 425 aa16.22■□□□□ 0.19
SPAST-204ENST00000621856 CRIP1P50238 77 aa16.22■□□□□ 0.19
SPAST-204ENST00000621856 SAMD13Q5VXD3 122 aa16.22■□□□□ 0.19
SPAST-204ENST00000621856 WFDC3Q8IUB2 231 aa16.22■□□□□ 0.19
SPAST-204ENST00000621856 GPR61Q9BZJ8 451 aa16.22■□□□□ 0.19
SPAST-204ENST00000621856 AGPAT4-IT1Q9H0P7 198 aa16.22■□□□□ 0.19
SPAST-204ENST00000621856 NAT8BQ9UHF3 227 aa16.22■□□□□ 0.19
SPAST-204ENST00000621856 ID1P41134 155 aa16.22■□□□□ 0.19
SPAST-204ENST00000621856 SMUG1Q53HV7 270 aa16.22■□□□□ 0.19
SPAST-204ENST00000621856 COX8CQ7Z4L0 72 aa16.22■□□□□ 0.19
SPAST-204ENST00000621856 FRZBQ92765 325 aa16.22■□□□□ 0.19
SPAST-204ENST00000621856 NEU1Q99519 415 aa16.22■□□□□ 0.19
SPAST-204ENST00000621856 PEMTQ9UBM1 199 aa16.22■□□□□ 0.19
SPAST-204ENST00000621856 TRAPPC1Q9Y5R8 145 aa16.22■□□□□ 0.19
SPAST-204ENST00000621856 OVOL1O14753 267 aa16.21■□□□□ 0.19
SPAST-204ENST00000621856 ZNF138P52744 262 aa16.21■□□□□ 0.19
SPAST-204ENST00000621856 ACTL10Q5JWF8 245 aa16.21■□□□□ 0.19
SPAST-204ENST00000621856 FAM162BQ5T6X4 162 aa16.21■□□□□ 0.19
SPAST-204ENST00000621856 RNF114Q9Y508 228 aa16.21■□□□□ 0.19
SPAST-204ENST00000621856 TCF21O43680 179 aa16.2■□□□□ 0.18
SPAST-204ENST00000621856 SH2D1AO60880 128 aa16.2■□□□□ 0.18
SPAST-204ENST00000621856 TRGC1P0CF51 173 aa16.2■□□□□ 0.18
SPAST-204ENST00000621856 FABP9Q0Z7S8 132 aa16.2■□□□□ 0.18
SPAST-204ENST00000621856 MRPL54Q6P161 138 aaKnown RBP16.2■□□□□ 0.18
SPAST-204ENST00000621856 C9orf47Q6ZRZ4 202 aa16.2■□□□□ 0.18
SPAST-204ENST00000621856 NUP35Q8NFH5 326 aa16.2■□□□□ 0.18
SPAST-204ENST00000621856 OR10J6PQ8NGY7 276 aa16.2■□□□□ 0.18
SPAST-204ENST00000621856 HIGD1CA8MV81 97 aa16.19■□□□□ 0.18
SPAST-204ENST00000621856 TFPI2P48307 235 aa16.19■□□□□ 0.18
SPAST-204ENST00000621856 CITED2Q99967 270 aaPredicted RBP16.19■□□□□ 0.18
SPAST-204ENST00000621856 MS4A6AQ9H2W1 248 aa16.19■□□□□ 0.18
SPAST-204ENST00000621856 TSSC4Q9Y5U2 329 aaPredicted RBP16.19■□□□□ 0.18
SPAST-204ENST00000621856 PHOX2AO14813 284 aa16.19■□□□□ 0.18
SPAST-204ENST00000621856 HIST1H2BKO60814 126 aa16.19■□□□□ 0.18
SPAST-204ENST00000621856 HIST1H2BJP06899 126 aa16.19■□□□□ 0.18
SPAST-204ENST00000621856 ZNF705DP0CH99 300 aaPredicted RBP16.19■□□□□ 0.18
SPAST-204ENST00000621856 ZNF705BP0CI00 300 aaPredicted RBP16.19■□□□□ 0.18
SPAST-204ENST00000621856 HIST1H2BOP23527 126 aa16.19■□□□□ 0.18
SPAST-204ENST00000621856 HIST1H2BBP33778 126 aa16.19■□□□□ 0.18
SPAST-204ENST00000621856 HIST1H2BDP58876 126 aa16.19■□□□□ 0.18
SPAST-204ENST00000621856 HIST1H2BCP62807 126 aa16.19■□□□□ 0.18
SPAST-204ENST00000621856 HIST2H2BEQ16778 126 aa16.19■□□□□ 0.18
SPAST-204ENST00000621856 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.19■□□□□ 0.18
SPAST-204ENST00000621856 OR9G4Q8NGQ1 327 aa16.19■□□□□ 0.18
SPAST-204ENST00000621856 DCANP1Q8TF63 244 aa16.19■□□□□ 0.18
SPAST-204ENST00000621856 DLX4Q92988 240 aaPredicted RBP16.19■□□□□ 0.18
SPAST-204ENST00000621856 HIST1H2BHQ93079 126 aa16.19■□□□□ 0.18
SPAST-204ENST00000621856 HIST1H2BNQ99877 126 aa16.19■□□□□ 0.18
SPAST-204ENST00000621856 HIST1H2BMQ99879 126 aa16.19■□□□□ 0.18
SPAST-204ENST00000621856 SAV1Q9H4B6 383 aaPredicted RBP16.19■□□□□ 0.18
SPAST-204ENST00000621856 GFRA4Q9GZZ7 299 aa16.18■□□□□ 0.18
SPAST-204ENST00000621856 GZMBP10144 247 aa16.17■□□□□ 0.18
SPAST-204ENST00000621856 SNRPEP62304 92 aaKnown RBP16.17■□□□□ 0.18
SPAST-204ENST00000621856 RAX2Q96IS3 184 aa16.17■□□□□ 0.18
SPAST-204ENST00000621856 SNURFLB1AK76 121 aa16.16■□□□□ 0.18
SPAST-204ENST00000621856 FRMD6-AS1P0C7T7 363 aa16.16■□□□□ 0.18
SPAST-204ENST00000621856 ZNF80P51504 273 aaPredicted RBP16.16■□□□□ 0.18
SPAST-204ENST00000621856 NDUFA6P56556 154 aa16.16■□□□□ 0.18
SPAST-204ENST00000621856 COX19Q49B96 90 aa16.16■□□□□ 0.18
SPAST-204ENST00000621856 ADAMTSL5Q6ZMM2 481 aa16.16■□□□□ 0.18
SPAST-204ENST00000621856 GTSF1Q8WW33 167 aa16.16■□□□□ 0.18
SPAST-204ENST00000621856 PGLYRP4Q96LB8 373 aa16.16■□□□□ 0.18
SPAST-204ENST00000621856 TMEM189A5PLL7 270 aa16.16■□□□□ 0.18
SPAST-204ENST00000621856 DEFB1P60022 68 aa16.16■□□□□ 0.18
SPAST-204ENST00000621856 RAB4BP61018 213 aa16.16■□□□□ 0.18
SPAST-204ENST00000621856 HIST1H1AQ02539 215 aaPredicted RBP16.16■□□□□ 0.18
SPAST-204ENST00000621856 WDR73Q6P4I2 378 aa16.16■□□□□ 0.18
SPAST-204ENST00000621856 LINC00477Q96M19 166 aa16.16■□□□□ 0.18
SPAST-204ENST00000621856 FAM231BA6NCW3 169 aa16.15■□□□□ 0.18
SPAST-204ENST00000621856 CCL24O00175 119 aa16.15■□□□□ 0.18
SPAST-204ENST00000621856 SRSF2Q01130 221 aaKnown RBP16.15■□□□□ 0.18
SPAST-204ENST00000621856 RBPMS2Q6ZRY4 209 aaKnown RBP16.15■□□□□ 0.18
SPAST-204ENST00000621856 OR8A1Q8NGG7 326 aa16.15■□□□□ 0.18
SPAST-204ENST00000621856 GNB1LQ9BYB4 327 aa16.15■□□□□ 0.18
SPAST-204ENST00000621856 MRPL18Q9H0U6 180 aaKnown RBP16.15■□□□□ 0.18
SPAST-204ENST00000621856 PPP1R14DQ9NXH3 145 aa16.15■□□□□ 0.18
SPAST-204ENST00000621856 FABP5P3A8MUU1 101 aa16.14■□□□□ 0.17
SPAST-204ENST00000621856 F6UB75 175 aa16.14■□□□□ 0.17
SPAST-204ENST00000621856 K7EQG2 157 aa16.14■□□□□ 0.17
SPAST-204ENST00000621856 CRLF1O75462 422 aa16.14■□□□□ 0.17
SPAST-204ENST00000621856 PROK1P58294 105 aa16.14■□□□□ 0.17
SPAST-204ENST00000621856 PAFAH1B2P68402 229 aa16.14■□□□□ 0.17
SPAST-204ENST00000621856 DYNLRB2Q8TF09 96 aa16.14■□□□□ 0.17
SPAST-204ENST00000621856 NF1P21359 2839 aa16.14■□□□□ 0.17
SPAST-204ENST00000621856 TMSB15BA0A087X1C1 80 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms