RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 GNG5P63218 68 aa10.33□□□□□ -0.76
CBWD3-217ENST00000621474 LINC00477Q96M19 166 aa10.33□□□□□ -0.76
CBWD3-217ENST00000621474 NEU1Q99519 415 aa10.33□□□□□ -0.76
CBWD3-217ENST00000621474 C11orf68Q9H3H3 251 aaKnown RBP10.33□□□□□ -0.76
CBWD3-217ENST00000621474 BOLA1Q9Y3E2 137 aa10.33□□□□□ -0.76
CBWD3-217ENST00000621474 YTHDF2Q9Y5A9 579 aaKnown RBP10.33□□□□□ -0.76
CBWD3-217ENST00000621474 IGHV3OR16-12A0A075B7B8 117 aa10.32□□□□□ -0.76
CBWD3-217ENST00000621474 A0A1W2PRE2 83 aa10.32□□□□□ -0.76
CBWD3-217ENST00000621474 AMBPP02760 352 aa10.32□□□□□ -0.76
CBWD3-217ENST00000621474 PRM2P04554 102 aa10.32□□□□□ -0.76
CBWD3-217ENST00000621474 SLC25A5P05141 298 aaKnown RBP10.32□□□□□ -0.76
CBWD3-217ENST00000621474 GFI1BQ5VTD9 330 aa10.32□□□□□ -0.76
CBWD3-217ENST00000621474 DPPA3Q6W0C5 159 aa10.32□□□□□ -0.76
CBWD3-217ENST00000621474 IQCF2Q8IXL9 164 aa10.32□□□□□ -0.76
CBWD3-217ENST00000621474 Q8TAT8 98 aa10.32□□□□□ -0.76
CBWD3-217ENST00000621474 RXFP4Q8TDU9 374 aa10.32□□□□□ -0.76
CBWD3-217ENST00000621474 ZNF492Q9P255 531 aa10.32□□□□□ -0.76
CBWD3-217ENST00000621474 KLLNB2CW77 178 aa10.31□□□□□ -0.76
CBWD3-217ENST00000621474 INSP01308 110 aa10.31□□□□□ -0.76
CBWD3-217ENST00000621474 CRISP2P16562 243 aa10.31□□□□□ -0.76
CBWD3-217ENST00000621474 CSN1S1P47710 185 aa10.31□□□□□ -0.76
CBWD3-217ENST00000621474 SULT1A2P50226 295 aa10.31□□□□□ -0.76
CBWD3-217ENST00000621474 SUMO1P63165 101 aaKnown RBP10.31□□□□□ -0.76
CBWD3-217ENST00000621474 PRR9Q5T870 116 aa10.31□□□□□ -0.76
CBWD3-217ENST00000621474 ZFAND2AQ8N6M9 145 aa10.31□□□□□ -0.76
CBWD3-217ENST00000621474 ARL6IP6Q8N6S5 226 aa10.31□□□□□ -0.76
CBWD3-217ENST00000621474 PPP1R14DQ9NXH3 145 aa10.31□□□□□ -0.76
CBWD3-217ENST00000621474 FAM74A7A6NL05 159 aa10.3□□□□□ -0.76
CBWD3-217ENST00000621474 J3KRW8 73 aa10.3□□□□□ -0.76
CBWD3-217ENST00000621474 UBE2G2P60604 165 aa10.3□□□□□ -0.76
CBWD3-217ENST00000621474 FAM74A1Q5RGS3 127 aa10.3□□□□□ -0.76
CBWD3-217ENST00000621474 C5orf17Q8NAS9 161 aa10.3□□□□□ -0.76
CBWD3-217ENST00000621474 MUC7Q8TAX7 377 aa10.3□□□□□ -0.76
CBWD3-217ENST00000621474 CMTM2Q8TAZ6 248 aa10.3□□□□□ -0.76
CBWD3-217ENST00000621474 SFT2D1Q8WV19 159 aa10.3□□□□□ -0.76
CBWD3-217ENST00000621474 RPH3ALQ9UNE2 315 aa10.3□□□□□ -0.76
CBWD3-217ENST00000621474 TRAV8-1A0A0A6YYK1 113 aa10.29□□□□□ -0.76
CBWD3-217ENST00000621474 TCRAP04437 139 aa10.29□□□□□ -0.76
CBWD3-217ENST00000621474 TMEM78Q5T7P6 136 aa10.29□□□□□ -0.76
CBWD3-217ENST00000621474 EIF5AL1Q6IS14 154 aaKnown RBP10.29□□□□□ -0.76
CBWD3-217ENST00000621474 GOLT1AQ6ZVE7 132 aa10.29□□□□□ -0.76
CBWD3-217ENST00000621474 IL17DQ8TAD2 202 aa10.29□□□□□ -0.76
CBWD3-217ENST00000621474 GOLT1BQ9Y3E0 138 aa10.29□□□□□ -0.76
CBWD3-217ENST00000621474 A0A1B0GV50 99 aa10.29□□□□□ -0.76
CBWD3-217ENST00000621474 H2AFB1P0C5Y9 115 aa10.29□□□□□ -0.76
CBWD3-217ENST00000621474 TSPOP30536 169 aa10.29□□□□□ -0.76
CBWD3-217ENST00000621474 LEPP41159 167 aa10.29□□□□□ -0.76
CBWD3-217ENST00000621474 RAB5CP51148 216 aa10.29□□□□□ -0.76
CBWD3-217ENST00000621474 ZNF138P52744 262 aa10.29□□□□□ -0.76
CBWD3-217ENST00000621474 Q6ZQT7 251 aa10.29□□□□□ -0.76
CBWD3-217ENST00000621474 CCDC28AQ8IWP9 274 aa10.29□□□□□ -0.76
CBWD3-217ENST00000621474 TVP23CQ96ET8 276 aa10.29□□□□□ -0.76
CBWD3-217ENST00000621474 EPDR1Q9UM22 224 aa10.29□□□□□ -0.76
CBWD3-217ENST00000621474 TRBV7-9A0A0J9YWB2 115 aa10.28□□□□□ -0.76
CBWD3-217ENST00000621474 SMIM9A6NGZ8 99 aa10.28□□□□□ -0.76
CBWD3-217ENST00000621474 ZNF324O75467 553 aaPredicted RBP10.28□□□□□ -0.76
CBWD3-217ENST00000621474 IGLV2-11P01706 119 aa10.28□□□□□ -0.76
CBWD3-217ENST00000621474 BTN1A1Q13410 526 aa10.28□□□□□ -0.76
CBWD3-217ENST00000621474 TRAV1-1A0A0B4J248 108 aa10.27□□□□□ -0.77
CBWD3-217ENST00000621474 PLAC8L1A1L4L8 177 aa10.27□□□□□ -0.77
CBWD3-217ENST00000621474 ZNF705GA8MUZ8 300 aaPredicted RBP10.27□□□□□ -0.77
CBWD3-217ENST00000621474 NMBP08949 121 aa10.27□□□□□ -0.77
CBWD3-217ENST00000621474 AZU1P20160 251 aa10.27□□□□□ -0.77
CBWD3-217ENST00000621474 CCL20P78556 96 aa10.27□□□□□ -0.77
CBWD3-217ENST00000621474 ALKAL2Q6UX46 152 aa10.27□□□□□ -0.77
CBWD3-217ENST00000621474 SGK494Q96LW2 274 aa10.27□□□□□ -0.77
CBWD3-217ENST00000621474 C20orf144Q9BQM9 153 aa10.27□□□□□ -0.77
CBWD3-217ENST00000621474 TMEM208Q9BTX3 173 aa10.27□□□□□ -0.77
CBWD3-217ENST00000621474 CELA1Q9UNI1 258 aa10.27□□□□□ -0.77
CBWD3-217ENST00000621474 LYSTQ99698 3801 aa10.27□□□□□ -0.77
CBWD3-217ENST00000621474 DYNC2H1Q8NCM8 4307 aaKnown RBP10.27□□□□□ -0.77
CBWD3-217ENST00000621474 TRAV12-3A0A0B4J271 114 aa10.26□□□□□ -0.77
CBWD3-217ENST00000621474 ATP5G3P48201 142 aa10.26□□□□□ -0.77
CBWD3-217ENST00000621474 TMEM256Q8N2U0 113 aa10.26□□□□□ -0.77
CBWD3-217ENST00000621474 ATG101Q9BSB4 218 aa10.26□□□□□ -0.77
CBWD3-217ENST00000621474 ARL2-SNX15V9GYD0 113 aa10.26□□□□□ -0.77
CBWD3-217ENST00000621474 SERTM2A0A1B0GWG4 89 aa10.25□□□□□ -0.77
CBWD3-217ENST00000621474 C7orf71A4D174 169 aa10.25□□□□□ -0.77
CBWD3-217ENST00000621474 PAGE4O60829 102 aa10.25□□□□□ -0.77
CBWD3-217ENST00000621474 HBE1P02100 147 aa10.25□□□□□ -0.77
CBWD3-217ENST00000621474 TAS2R60P59551 318 aa10.25□□□□□ -0.77
CBWD3-217ENST00000621474 RRN3P1Q2M238 152 aa10.25□□□□□ -0.77
CBWD3-217ENST00000621474 LINC00479Q96M42 142 aa10.25□□□□□ -0.77
CBWD3-217ENST00000621474 LINC01587Q99440 93 aa10.25□□□□□ -0.77
CBWD3-217ENST00000621474 NKX6-2Q9C056 277 aaPredicted RBP10.25□□□□□ -0.77
CBWD3-217ENST00000621474 LENEPQ9Y5L5 61 aa10.25□□□□□ -0.77
CBWD3-217ENST00000621474 LOC102723971A0A1B0GUV8 181 aa10.25□□□□□ -0.77
CBWD3-217ENST00000621474 H7BYZ3 331 aa10.25□□□□□ -0.77
CBWD3-217ENST00000621474 GPX1P07203 203 aa10.25□□□□□ -0.77
CBWD3-217ENST00000621474 NANOS2P60321 138 aaKnown RBP10.25□□□□□ -0.77
CBWD3-217ENST00000621474 CASC10Q5T4H9 136 aa10.25□□□□□ -0.77
CBWD3-217ENST00000621474 CYB561D1Q8N8Q1 229 aa10.25□□□□□ -0.77
CBWD3-217ENST00000621474 TMEM75Q8N9X5 138 aa10.25□□□□□ -0.77
CBWD3-217ENST00000621474 RNASE8Q8TDE3 154 aaKnown RBP10.25□□□□□ -0.77
CBWD3-217ENST00000621474 KMT2CQ8NEZ4 4911 aaKnown RBP10.24□□□□□ -0.77
CBWD3-217ENST00000621474 PLECQ15149 4684 aaKnown RBP10.24□□□□□ -0.77
CBWD3-217ENST00000621474 C3orf84H3BNL1 204 aa10.24□□□□□ -0.77
CBWD3-217ENST00000621474 RNASE4P34096 147 aaKnown RBP10.24□□□□□ -0.77
CBWD3-217ENST00000621474 C11orf45Q8TAV5 145 aa10.24□□□□□ -0.77
CBWD3-217ENST00000621474 PEX7O00628 323 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms