RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 SAMD13Q5VXD3 122 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 IGF2-ASQ6U949 168 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 IGHV4-61A0A0C4DH41 118 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 A0A1W2PPI3 338 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 HOXA3O43365 443 aaPredicted RBP6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 MT-ND6P03923 174 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 DSCR9P59020 149 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 ERCC8Q13216 396 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 SPINK13Q1W4C9 94 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 Q6ZWC4 215 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 OR9G4Q8NGQ1 327 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 TMEM70Q9BUB7 260 aa6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 MCRIP2Q9BUT9 160 aaKnown RBP6.62□□□□□ -1.35
PTPDC1-204ENST00000620992 LAMA5O15230 3695 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 SPRY2O43597 315 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 NDUFB8O95169 186 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 YPEL3P61236 119 aaPredicted RBP6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 C1orf194Q5T5A4 169 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 IGHV4-30-2A0A087WSY4 118 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 A0A1B0GWJ7 208 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 OR11H12B2RN74 326 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 TCRAP04437 139 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 SLC25A16P16260 332 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 LOXP28300 417 aaPredicted RBP6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 ZNF138P52744 262 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 RPS20P60866 119 aaKnown RBP6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 NPC2P61916 151 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 SPATA45Q537H7 98 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 SEM1Q6ZVN7 128 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 TMEM101Q96IK0 257 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 PTPRBP23467 1997 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 TRAV12-2A0A075B6T6 113 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 IGKV1OR2-108A0A075B7D4 117 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 IGLV2-23P01705 113 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 PRR20EP86478 221 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 PRR20CP86479 221 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 PRR20DP86480 221 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 PRR20BP86481 221 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 PRR20AP86496 221 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 OR11H1Q8NG94 326 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 OR11H2Q8NH07 326 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 ZNF414Q96IQ9 312 aa6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 RPP21Q9H633 154 aaKnown RBP6.61□□□□□ -1.35
PTPDC1-204ENST00000620992 ZNF876PQ49A33 203 aa6.6□□□□□ -1.35
PTPDC1-204ENST00000620992 C14orf178Q8N769 122 aaPredicted RBP6.6□□□□□ -1.35
PTPDC1-204ENST00000620992 V9GYV3 84 aa6.6□□□□□ -1.35
PTPDC1-204ENST00000620992 A6NDN8 102 aa6.6□□□□□ -1.35
PTPDC1-204ENST00000620992 GGTLC3B5MD39 225 aa6.6□□□□□ -1.35
PTPDC1-204ENST00000620992 MALP21145 153 aa6.6□□□□□ -1.35
PTPDC1-204ENST00000620992 IGHV1-69DA0A0B4J2H0 117 aa6.6□□□□□ -1.35
PTPDC1-204ENST00000620992 ATP5LO75964 103 aa6.6□□□□□ -1.35
PTPDC1-204ENST00000620992 IGHV1-69P01742 117 aa6.6□□□□□ -1.35
PTPDC1-204ENST00000620992 CFHR2P36980 270 aa6.6□□□□□ -1.35
PTPDC1-204ENST00000620992 SRSF2Q01130 221 aaKnown RBP6.6□□□□□ -1.35
PTPDC1-204ENST00000620992 FAM120AOSQ5T036 256 aa6.6□□□□□ -1.35
PTPDC1-204ENST00000620992 FAM169BQ8N8A8 192 aa6.6□□□□□ -1.35
PTPDC1-204ENST00000620992 TP53TG3Q9ULZ0 132 aa6.6□□□□□ -1.35
PTPDC1-204ENST00000620992 BLCAPP62952 87 aa6.6□□□□□ -1.35
PTPDC1-204ENST00000620992 PVRIGQ6DKI7 326 aa6.6□□□□□ -1.35
PTPDC1-204ENST00000620992 LHBP01229 141 aa6.59□□□□□ -1.35
PTPDC1-204ENST00000620992 ATP5IP56385 69 aaPredicted RBP6.59□□□□□ -1.35
PTPDC1-204ENST00000620992 DEFB112Q30KQ8 113 aa6.59□□□□□ -1.35
PTPDC1-204ENST00000620992 HIST2H2BDQ6DRA6 164 aa6.59□□□□□ -1.35
PTPDC1-204ENST00000620992 C11orf52Q96A22 123 aa6.59□□□□□ -1.35
PTPDC1-204ENST00000620992 RCHY1Q96PM5 261 aa6.59□□□□□ -1.35
PTPDC1-204ENST00000620992 CDC42EP3Q9UKI2 254 aa6.59□□□□□ -1.35
PTPDC1-204ENST00000620992 SMKR1H3BMG3 65 aa6.59□□□□□ -1.35
PTPDC1-204ENST00000620992 H7C1H1 209 aa6.59□□□□□ -1.35
PTPDC1-204ENST00000620992 CGB3P0DN86 165 aa6.59□□□□□ -1.35
PTPDC1-204ENST00000620992 CGB7P0DN87 165 aa6.59□□□□□ -1.35
PTPDC1-204ENST00000620992 OR10J3Q5JRS4 329 aa6.59□□□□□ -1.35
PTPDC1-204ENST00000620992 MINOS1Q5TGZ0 78 aa6.59□□□□□ -1.35
PTPDC1-204ENST00000620992 MORN5Q5VZ52 161 aa6.59□□□□□ -1.35
PTPDC1-204ENST00000620992 PEF1Q9UBV8 284 aaKnown RBP6.59□□□□□ -1.35
PTPDC1-204ENST00000620992 KLK9Q9UKQ9 250 aa6.59□□□□□ -1.35
PTPDC1-204ENST00000620992 MINOS1-NBL1R4GNA1 71 aa6.59□□□□□ -1.35
PTPDC1-204ENST00000620992 DCHS1Q96JQ0 3298 aa6.59□□□□□ -1.35
PTPDC1-204ENST00000620992 TRAV21A0A0B4J279 112 aa6.59□□□□□ -1.36
PTPDC1-204ENST00000620992 TMEM155Q4W5P6 130 aa6.59□□□□□ -1.36
PTPDC1-204ENST00000620992 C22orf34Q6ZV56 151 aa6.59□□□□□ -1.36
PTPDC1-204ENST00000620992 VCX2Q9H322 139 aa6.59□□□□□ -1.36
PTPDC1-204ENST00000620992 ESM1Q9NQ30 184 aa6.59□□□□□ -1.36
PTPDC1-204ENST00000620992 RNASE2P10153 161 aaKnown RBP6.58□□□□□ -1.36
PTPDC1-204ENST00000620992 PAX1P15863 534 aa6.58□□□□□ -1.36
PTPDC1-204ENST00000620992 CIRBPQ14011 172 aaKnown RBP6.58□□□□□ -1.36
PTPDC1-204ENST00000620992 ORMDL3Q8N138 153 aa6.58□□□□□ -1.36
PTPDC1-204ENST00000620992 TRAV9-1A0A075B6T8 112 aa6.58□□□□□ -1.36
PTPDC1-204ENST00000620992 TRAV13-1A0A0B4J241 112 aa6.58□□□□□ -1.36
PTPDC1-204ENST00000620992 F5H768 121 aa6.58□□□□□ -1.36
PTPDC1-204ENST00000620992 TCF21O43680 179 aa6.58□□□□□ -1.36
PTPDC1-204ENST00000620992 SSBP2P81877 361 aaPredicted RBP6.58□□□□□ -1.36
PTPDC1-204ENST00000620992 CD300EQ496F6 205 aaPredicted RBP6.58□□□□□ -1.36
PTPDC1-204ENST00000620992 TNFRSF14Q92956 283 aa6.58□□□□□ -1.36
PTPDC1-204ENST00000620992 ZNF503Q96F45 646 aa6.58□□□□□ -1.36
PTPDC1-204ENST00000620992 ZNF625Q96I27 306 aaPredicted RBP6.58□□□□□ -1.36
PTPDC1-204ENST00000620992 ZNF257Q9Y2Q1 563 aa6.58□□□□□ -1.36
PTPDC1-204ENST00000620992 LEPP41159 167 aa6.58□□□□□ -1.36
PTPDC1-204ENST00000620992 LINC00310P59036 64 aa6.58□□□□□ -1.36
PTPDC1-204ENST00000620992 TCTEX1D4Q5JR98 221 aa6.58□□□□□ -1.36
PTPDC1-204ENST00000620992 LCN12Q6JVE5 192 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms