RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 OVOL2Q9BRP0 275 aa9.03□□□□□ -0.96
CLIP1-219ENST00000620786 ZNF492Q9P255 531 aa9.03□□□□□ -0.96
CLIP1-219ENST00000620786 CACNA1BQ00975 2339 aa9.03□□□□□ -0.96
CLIP1-219ENST00000620786 VWC2LB2RUY7 222 aa9.03□□□□□ -0.96
CLIP1-219ENST00000620786 GUSBP1Q15486 140 aa9.03□□□□□ -0.96
CLIP1-219ENST00000620786 IGFBPL1Q8WX77 278 aa9.03□□□□□ -0.96
CLIP1-219ENST00000620786 A0A1B0GUS0 222 aa9.02□□□□□ -0.97
CLIP1-219ENST00000620786 PLA2G5P39877 138 aa9.02□□□□□ -0.97
CLIP1-219ENST00000620786 SLURP1P55000 103 aa9.02□□□□□ -0.97
CLIP1-219ENST00000620786 NOP10Q9NPE3 64 aaKnown RBP9.02□□□□□ -0.97
CLIP1-219ENST00000620786 NUP210Q8TEM1 1887 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-219ENST00000620786 ANGP03950 147 aaKnown RBP9.02□□□□□ -0.97
CLIP1-219ENST00000620786 PFN2P35080 140 aa9.02□□□□□ -0.97
CLIP1-219ENST00000620786 FOXI2Q6ZQN5 318 aa9.02□□□□□ -0.97
CLIP1-219ENST00000620786 GP9P14770 177 aa9.02□□□□□ -0.97
CLIP1-219ENST00000620786 FOXE3Q13461 319 aa9.02□□□□□ -0.97
CLIP1-219ENST00000620786 SAMD5Q5TGI4 173 aa9.02□□□□□ -0.97
CLIP1-219ENST00000620786 CLPSL2Q6UWE3 100 aa9.02□□□□□ -0.97
CLIP1-219ENST00000620786 LYL1P12980 280 aa9.02□□□□□ -0.97
CLIP1-219ENST00000620786 MTURNQ8N3F0 131 aa9.02□□□□□ -0.97
CLIP1-219ENST00000620786 TMEM141Q96I45 108 aa9.02□□□□□ -0.97
CLIP1-219ENST00000620786 TRAV26-2A0A0B4J265 109 aa9.01□□□□□ -0.97
CLIP1-219ENST00000620786 hDV102S1A0JD36 115 aa9.01□□□□□ -0.97
CLIP1-219ENST00000620786 C10orf105Q8TEF2 133 aa9.01□□□□□ -0.97
CLIP1-219ENST00000620786 TMEM126AQ9H061 195 aa9.01□□□□□ -0.97
CLIP1-219ENST00000620786 IGKV1-39P01597 117 aa9.01□□□□□ -0.97
CLIP1-219ENST00000620786 IGKV1D-39P04432 117 aa9.01□□□□□ -0.97
CLIP1-219ENST00000620786 YLPM1P49750 1951 aaKnown RBP9.01□□□□□ -0.97
CLIP1-219ENST00000620786 IGKV2D-24A0A075B6R9 120 aa9.01□□□□□ -0.97
CLIP1-219ENST00000620786 IGKV1OR2-108A0A075B7D4 117 aa9.01□□□□□ -0.97
CLIP1-219ENST00000620786 SPRNQ5BIV9 151 aa9.01□□□□□ -0.97
CLIP1-219ENST00000620786 PI4KAP42356 2102 aa9.01□□□□□ -0.97
CLIP1-219ENST00000620786 IGLV2-23P01705 113 aa9.01□□□□□ -0.97
CLIP1-219ENST00000620786 ATP6V0BQ99437 205 aa9.01□□□□□ -0.97
CLIP1-219ENST00000620786 TMEM14CQ9P0S9 112 aa9.01□□□□□ -0.97
CLIP1-219ENST00000620786 FER1L5A0AVI2 2057 aa9.01□□□□□ -0.97
CLIP1-219ENST00000620786 ESDP10768 282 aa9.01□□□□□ -0.97
CLIP1-219ENST00000620786 BCL6BQ8N143 479 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-219ENST00000620786 EP300Q09472 2414 aaPredicted RBP9□□□□□ -0.97
CLIP1-219ENST00000620786 CENPVL3A0A0U1RRI6 287 aa9□□□□□ -0.97
CLIP1-219ENST00000620786 RPL32P62910 135 aaKnown RBP9□□□□□ -0.97
CLIP1-219ENST00000620786 SLAQ13239 276 aa9□□□□□ -0.97
CLIP1-219ENST00000620786 ZNF114Q8NC26 417 aa9□□□□□ -0.97
CLIP1-219ENST00000620786 ALPK2Q86TB3 2170 aa9□□□□□ -0.97
CLIP1-219ENST00000620786 CHAC1Q9BUX1 264 aa9□□□□□ -0.97
CLIP1-219ENST00000620786 DKK4Q9UBT3 224 aa9□□□□□ -0.97
CLIP1-219ENST00000620786 HEATR1Q9H583 2144 aaKnown RBP9□□□□□ -0.97
CLIP1-219ENST00000620786 HIST1H2BLQ99880 126 aa9□□□□□ -0.97
CLIP1-219ENST00000620786 SNHG12Q9BXW3 62 aa9□□□□□ -0.97
CLIP1-219ENST00000620786 GSN-AS1Q9NRJ2 163 aa9□□□□□ -0.97
CLIP1-219ENST00000620786 HLA-DRB4P13762 266 aa9□□□□□ -0.97
CLIP1-219ENST00000620786 APRG1Q8IVJ8 170 aa9□□□□□ -0.97
CLIP1-219ENST00000620786 PRR25Q96S07 402 aa9□□□□□ -0.97
CLIP1-219ENST00000620786 HLA-DRB4X5D2U9 266 aa9□□□□□ -0.97
CLIP1-219ENST00000620786 PTPRDP23468 1912 aa9□□□□□ -0.97
CLIP1-219ENST00000620786 SDHAF1A6NFY7 115 aa8.99□□□□□ -0.97
CLIP1-219ENST00000620786 CFPP27918 469 aa8.99□□□□□ -0.97
CLIP1-219ENST00000620786 HIST1H4AP62805 103 aaKnown RBP8.99□□□□□ -0.97
CLIP1-219ENST00000620786 RSPO1Q2MKA7 263 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-219ENST00000620786 OR11H6Q8NGC7 330 aa8.99□□□□□ -0.97
CLIP1-219ENST00000620786 PRSS29PA6NIE9 313 aa8.99□□□□□ -0.97
CLIP1-219ENST00000620786 C8orf31Q8N9H6 132 aa8.99□□□□□ -0.97
CLIP1-219ENST00000620786 PIFOQ8TCI5 191 aa8.99□□□□□ -0.97
CLIP1-219ENST00000620786 IGHV1-24A0A0C4DH33 117 aa8.99□□□□□ -0.97
CLIP1-219ENST00000620786 NXPH4O95158 308 aa8.99□□□□□ -0.97
CLIP1-219ENST00000620786 RHOHQ15669 191 aa8.99□□□□□ -0.97
CLIP1-219ENST00000620786 ZC2HC1BQ5TFG8 222 aa8.99□□□□□ -0.97
CLIP1-219ENST00000620786 TRAV8-3A0A0A6YYJ7 113 aa8.98□□□□□ -0.97
CLIP1-219ENST00000620786 SYS1-DBNDD2H3BUS1 97 aa8.98□□□□□ -0.97
CLIP1-219ENST00000620786 DAZAP2Q15038 168 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-219ENST00000620786 C2orf66Q6UXQ4 117 aa8.98□□□□□ -0.97
CLIP1-219ENST00000620786 NEGR1Q7Z3B1 354 aa8.98□□□□□ -0.97
CLIP1-219ENST00000620786 Q8N8P6 123 aa8.98□□□□□ -0.97
CLIP1-219ENST00000620786 Q9HAA7 133 aa8.98□□□□□ -0.97
CLIP1-219ENST00000620786 IGLC1P0CG04 106 aa8.98□□□□□ -0.97
CLIP1-219ENST00000620786 MRPL53Q96EL3 112 aaKnown RBP8.98□□□□□ -0.97
CLIP1-219ENST00000620786 HIST3H2BBQ8N257 126 aa8.98□□□□□ -0.97
CLIP1-219ENST00000620786 DNAJC30Q96LL9 226 aa8.98□□□□□ -0.97
CLIP1-219ENST00000620786 MEGF9Q9H1U4 602 aa8.98□□□□□ -0.97
CLIP1-219ENST00000620786 F6UB75 175 aa8.98□□□□□ -0.97
CLIP1-219ENST00000620786 KLF5Q13887 457 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-219ENST00000620786 FAM104BQ5XKR9 115 aa8.98□□□□□ -0.97
CLIP1-219ENST00000620786 U3KQE9 123 aa8.98□□□□□ -0.97
CLIP1-219ENST00000620786 MED12Q93074 2177 aa8.97□□□□□ -0.97
CLIP1-219ENST00000620786 COL6A6A6NMZ7 2263 aa8.97□□□□□ -0.97
CLIP1-219ENST00000620786 HELZP42694 1942 aaKnown RBP8.97□□□□□ -0.97
CLIP1-219ENST00000620786 PLXND1Q9Y4D7 1925 aa8.97□□□□□ -0.97
CLIP1-219ENST00000620786 C2orf82Q6UX34 121 aa8.97□□□□□ -0.97
CLIP1-219ENST00000620786 TMEM256Q8N2U0 113 aa8.97□□□□□ -0.97
CLIP1-219ENST00000620786 VOPP1Q96AW1 172 aa8.97□□□□□ -0.97
CLIP1-219ENST00000620786 SPAG8Q99932 426 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-219ENST00000620786 Q6ZQT7 251 aa8.97□□□□□ -0.97
CLIP1-219ENST00000620786 C1orf147Q96MC9 270 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-219ENST00000620786 MPDZO75970 2070 aa8.97□□□□□ -0.97
CLIP1-219ENST00000620786 UBE2BP63146 152 aa8.96□□□□□ -0.97
CLIP1-219ENST00000620786 MYLKQ15746 1914 aa8.96□□□□□ -0.97
CLIP1-219ENST00000620786 TEX48A0A1B0GUV7 120 aa8.96□□□□□ -0.97
CLIP1-219ENST00000620786 C11orf53Q8IXP5 236 aa8.96□□□□□ -0.97
CLIP1-219ENST00000620786 NAA38Q9BRA0 125 aaKnown RBP8.96□□□□□ -0.97
CLIP1-219ENST00000620786 PHF3Q92576 2039 aaKnown RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms