RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 SLC25A39Q9BZJ4 359 aaPredicted RBP7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 XGP55808 180 aa7.75□□□□□ -1.17
TNFAIP3-210ENST00000620204 TNFAIP6P98066 277 aaPredicted RBP7.75□□□□□ -1.17
TNFAIP3-210ENST00000620204 C8orf46Q8TAG6 207 aa7.75□□□□□ -1.17
TNFAIP3-210ENST00000620204 CFAP47Q6ZTR5 3102 aa7.75□□□□□ -1.17
TNFAIP3-210ENST00000620204 RRN3P1Q2M238 152 aa7.75□□□□□ -1.17
TNFAIP3-210ENST00000620204 DPF1Q92782 380 aa7.75□□□□□ -1.17
TNFAIP3-210ENST00000620204 SCNM1Q9BWG6 230 aa7.75□□□□□ -1.17
TNFAIP3-210ENST00000620204 TNRC6BQ9UPQ9 1833 aaKnown RBP7.75□□□□□ -1.17
TNFAIP3-210ENST00000620204 LAMA5O15230 3695 aa7.75□□□□□ -1.17
TNFAIP3-210ENST00000620204 TRAV8-2A0A0B4J237 113 aa7.75□□□□□ -1.17
TNFAIP3-210ENST00000620204 EFNA4P52798 201 aa7.75□□□□□ -1.17
TNFAIP3-210ENST00000620204 ATP5IP56385 69 aaPredicted RBP7.75□□□□□ -1.17
TNFAIP3-210ENST00000620204 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.75□□□□□ -1.17
TNFAIP3-210ENST00000620204 RNF7Q9UBF6 113 aa7.75□□□□□ -1.17
TNFAIP3-210ENST00000620204 RPL7P18124 248 aaKnown RBP7.74□□□□□ -1.17
TNFAIP3-210ENST00000620204 ZNF562Q6V9R5 426 aa7.74□□□□□ -1.17
TNFAIP3-210ENST00000620204 SH2D1AO60880 128 aa7.74□□□□□ -1.17
TNFAIP3-210ENST00000620204 GP9P14770 177 aa7.74□□□□□ -1.17
TNFAIP3-210ENST00000620204 CD40P25942 277 aa7.74□□□□□ -1.17
TNFAIP3-210ENST00000620204 Q6ZUT4 128 aa7.74□□□□□ -1.17
TNFAIP3-210ENST00000620204 HLA-DRB4P13762 266 aa7.74□□□□□ -1.17
TNFAIP3-210ENST00000620204 MYCNOSP40205 109 aa7.74□□□□□ -1.17
TNFAIP3-210ENST00000620204 GAGE5Q13069 117 aa7.74□□□□□ -1.17
TNFAIP3-210ENST00000620204 GAGE6Q13070 117 aa7.74□□□□□ -1.17
TNFAIP3-210ENST00000620204 ODF1Q14990 250 aa7.74□□□□□ -1.17
TNFAIP3-210ENST00000620204 SHISA2Q6UWI4 295 aa7.74□□□□□ -1.17
TNFAIP3-210ENST00000620204 ZFP2Q6ZN57 461 aa7.74□□□□□ -1.17
TNFAIP3-210ENST00000620204 CCL17Q92583 94 aa7.74□□□□□ -1.17
TNFAIP3-210ENST00000620204 DLX4Q92988 240 aaPredicted RBP7.74□□□□□ -1.17
TNFAIP3-210ENST00000620204 NGBQ9NPG2 151 aa7.74□□□□□ -1.17
TNFAIP3-210ENST00000620204 BEX4Q9NWD9 120 aaPredicted RBP7.74□□□□□ -1.17
TNFAIP3-210ENST00000620204 SPRR3Q9UBC9 169 aa7.74□□□□□ -1.17
TNFAIP3-210ENST00000620204 HLA-DRB4X5D2U9 266 aa7.74□□□□□ -1.17
TNFAIP3-210ENST00000620204 ARHGAP32A7KAX9 2087 aa7.73□□□□□ -1.17
TNFAIP3-210ENST00000620204 CLEC3BP05452 202 aa7.73□□□□□ -1.17
TNFAIP3-210ENST00000620204 RITA1Q96K30 269 aa7.73□□□□□ -1.17
TNFAIP3-210ENST00000620204 KIR2DL4Q99706 377 aa7.73□□□□□ -1.17
TNFAIP3-210ENST00000620204 TRAV26-2A0A0B4J265 109 aa7.73□□□□□ -1.17
TNFAIP3-210ENST00000620204 C16orf97H3BN30 126 aa7.73□□□□□ -1.17
TNFAIP3-210ENST00000620204 EMP1P54849 157 aa7.73□□□□□ -1.17
TNFAIP3-210ENST00000620204 Q1RN00 199 aa7.73□□□□□ -1.17
TNFAIP3-210ENST00000620204 PIP4P1Q86T03 277 aa7.73□□□□□ -1.17
TNFAIP3-210ENST00000620204 C1QTNF4Q9BXJ3 329 aa7.73□□□□□ -1.17
TNFAIP3-210ENST00000620204 A0A1B0GW15 77 aa7.73□□□□□ -1.17
TNFAIP3-210ENST00000620204 TNFRSF6BO95407 300 aa7.73□□□□□ -1.17
TNFAIP3-210ENST00000620204 CNTFRP26992 372 aa7.73□□□□□ -1.17
TNFAIP3-210ENST00000620204 CRIP1P50238 77 aa7.73□□□□□ -1.17
TNFAIP3-210ENST00000620204 CR1LQ2VPA4 569 aa7.73□□□□□ -1.17
TNFAIP3-210ENST00000620204 IGHV3OR16-13A0A075B7E8 117 aa7.72□□□□□ -1.17
TNFAIP3-210ENST00000620204 IGHV3-74A0A0B4J1X5 117 aa7.72□□□□□ -1.17
TNFAIP3-210ENST00000620204 SNCGO76070 127 aa7.72□□□□□ -1.17
TNFAIP3-210ENST00000620204 IGHV3-23P01764 117 aa7.72□□□□□ -1.17
TNFAIP3-210ENST00000620204 GAGE2BQ13066 116 aa7.72□□□□□ -1.17
TNFAIP3-210ENST00000620204 GAGE2EQ4V326 116 aa7.72□□□□□ -1.17
TNFAIP3-210ENST00000620204 GAGE2DQ9UEU5 116 aa7.72□□□□□ -1.17
TNFAIP3-210ENST00000620204 DMXL2Q8TDJ6 3036 aa7.72□□□□□ -1.17
TNFAIP3-210ENST00000620204 WISP2O76076 250 aa7.72□□□□□ -1.17
TNFAIP3-210ENST00000620204 POU2AF1Q16633 256 aa7.72□□□□□ -1.17
TNFAIP3-210ENST00000620204 Q6AWC8 147 aa7.72□□□□□ -1.17
TNFAIP3-210ENST00000620204 Q6ZT83 130 aa7.72□□□□□ -1.17
TNFAIP3-210ENST00000620204 FBXL15Q9H469 300 aa7.72□□□□□ -1.17
TNFAIP3-210ENST00000620204 RAXQ9Y2V3 346 aa7.72□□□□□ -1.17
TNFAIP3-210ENST00000620204 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.72□□□□□ -1.173e-7■■■■■ 32
TNFAIP3-210ENST00000620204 COX7A1P24310 79 aa7.72□□□□□ -1.17
TNFAIP3-210ENST00000620204 PROCRQ9UNN8 238 aa7.72□□□□□ -1.17
TNFAIP3-210ENST00000620204 ZNF815PA8K554 130 aa7.71□□□□□ -1.17
TNFAIP3-210ENST00000620204 IGHV1-18A0A0C4DH31 117 aa7.71□□□□□ -1.18
TNFAIP3-210ENST00000620204 LINC01548A6NM66 108 aa7.71□□□□□ -1.18
TNFAIP3-210ENST00000620204 A8MWV9 139 aa7.71□□□□□ -1.18
TNFAIP3-210ENST00000620204 NFE4Q86UQ8 179 aa7.71□□□□□ -1.18
TNFAIP3-210ENST00000620204 TMEM167AQ8TBQ9 72 aa7.71□□□□□ -1.18
TNFAIP3-210ENST00000620204 TRGV9Q99603 122 aa7.71□□□□□ -1.18
TNFAIP3-210ENST00000620204 SPRY4Q9C004 299 aa7.71□□□□□ -1.18
TNFAIP3-210ENST00000620204 HHLA3Q9XRX5 114 aa7.71□□□□□ -1.18
TNFAIP3-210ENST00000620204 ATP5LO75964 103 aa7.7□□□□□ -1.18
TNFAIP3-210ENST00000620204 EGR2P11161 476 aaPredicted RBP7.7□□□□□ -1.18
TNFAIP3-210ENST00000620204 MSMPQ1L6U9 139 aa7.7□□□□□ -1.18
TNFAIP3-210ENST00000620204 PHLDA1Q8WV24 401 aaPredicted RBP7.7□□□□□ -1.18
TNFAIP3-210ENST00000620204 RAX2Q96IS3 184 aa7.7□□□□□ -1.18
TNFAIP3-210ENST00000620204 TM2D2Q9BX73 214 aa7.7□□□□□ -1.18
TNFAIP3-210ENST00000620204 HIGD1BQ9P298 99 aa7.7□□□□□ -1.18
TNFAIP3-210ENST00000620204 WI2-2373I1.2A0A1W2PRP0 233 aa7.7□□□□□ -1.18
TNFAIP3-210ENST00000620204 SPRY2O43597 315 aa7.7□□□□□ -1.18
TNFAIP3-210ENST00000620204 IGLV2-11P01706 119 aa7.7□□□□□ -1.18
TNFAIP3-210ENST00000620204 KLRD1Q13241 179 aa7.7□□□□□ -1.18
TNFAIP3-210ENST00000620204 HES1Q14469 280 aa7.7□□□□□ -1.18
TNFAIP3-210ENST00000620204 THAP8Q8NA92 274 aa7.7□□□□□ -1.18
TNFAIP3-210ENST00000620204 TRBV19A0A075B6N1 114 aa7.7□□□□□ -1.18
TNFAIP3-210ENST00000620204 A6NJY4 79 aa7.7□□□□□ -1.18
TNFAIP3-210ENST00000620204 NXT2Q9NPJ8 142 aaKnown RBP7.7□□□□□ -1.18
TNFAIP3-210ENST00000620204 ONECUT1Q9UBC0 465 aa7.7□□□□□ -1.18
TNFAIP3-210ENST00000620204 SPANXN1Q5VSR9 72 aa7.69□□□□□ -1.18
TNFAIP3-210ENST00000620204 PPDPFLQ8WWR9 84 aa7.69□□□□□ -1.18
TNFAIP3-210ENST00000620204 CDIP1Q9H305 208 aa7.69□□□□□ -1.18
TNFAIP3-210ENST00000620204 ERG28Q9UKR5 140 aa7.69□□□□□ -1.18
TNFAIP3-210ENST00000620204 ZNF785A8K8V0 405 aa7.69□□□□□ -1.18
TNFAIP3-210ENST00000620204 HLA-DMBP28068 263 aa7.69□□□□□ -1.18
TNFAIP3-210ENST00000620204 KLHL30-AS1Q8NEE0 82 aa7.69□□□□□ -1.18
TNFAIP3-210ENST00000620204 TRAV17A0A0B4J275 112 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms