RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 RPL11P62913 178 aaKnown RBP15.42■□□□□ 0.06
MMP28-207ENST00000619655 TM4SF20Q53R12 229 aa15.42■□□□□ 0.06
MMP28-207ENST00000619655 IGKV3-7A0A075B6H7 116 aa15.42■□□□□ 0.06
MMP28-207ENST00000619655 NPIPB6E9PJ23 425 aa15.42■□□□□ 0.06
MMP28-207ENST00000619655 MT-ND6P03923 174 aa15.42■□□□□ 0.06
MMP28-207ENST00000619655 CT83Q5H943 113 aa15.42■□□□□ 0.06
MMP28-207ENST00000619655 GLMPQ8WWB7 406 aa15.42■□□□□ 0.06
MMP28-207ENST00000619655 TRAV8-2A0A0B4J237 113 aa15.41■□□□□ 0.06
MMP28-207ENST00000619655 A8MWP6 167 aa15.41■□□□□ 0.06
MMP28-207ENST00000619655 C16orf92Q96LL3 132 aa15.41■□□□□ 0.06
MMP28-207ENST00000619655 PRR25Q96S07 402 aa15.41■□□□□ 0.06
MMP28-207ENST00000619655 SSBP4Q9BWG4 385 aaPredicted RBP15.41■□□□□ 0.06
MMP28-207ENST00000619655 ZNF580Q9UK33 172 aa15.41■□□□□ 0.06
MMP28-207ENST00000619655 CRISP2P16562 243 aa15.4■□□□□ 0.06
MMP28-207ENST00000619655 TMEM256Q8N2U0 113 aa15.4■□□□□ 0.06
MMP28-207ENST00000619655 HLA-DQA1P01909 254 aa15.4■□□□□ 0.06
MMP28-207ENST00000619655 GDF5OSQ5U4N7 250 aa15.4■□□□□ 0.06
MMP28-207ENST00000619655 TMEM18Q96B42 140 aa15.4■□□□□ 0.06
MMP28-207ENST00000619655 TMSB15BA0A087X1C1 80 aa15.39■□□□□ 0.05
MMP28-207ENST00000619655 EDN2P20800 178 aa15.39■□□□□ 0.05
MMP28-207ENST00000619655 SLAQ13239 276 aa15.39■□□□□ 0.05
MMP28-207ENST00000619655 COX19Q49B96 90 aa15.39■□□□□ 0.05
MMP28-207ENST00000619655 OR4B1Q8NGF8 309 aa15.39■□□□□ 0.05
MMP28-207ENST00000619655 NDUFAF3Q9BU61 184 aa15.39■□□□□ 0.05
MMP28-207ENST00000619655 TPPP3Q9BW30 176 aa15.39■□□□□ 0.05
MMP28-207ENST00000619655 MYO9AB2RTY4 2548 aa15.39■□□□□ 0.05
MMP28-207ENST00000619655 APCSP02743 223 aa15.39■□□□□ 0.05
MMP28-207ENST00000619655 SAPCD1Q5SSQ6 148 aa15.39■□□□□ 0.05
MMP28-207ENST00000619655 ACANP16112 2415 aa15.38■□□□□ 0.05
MMP28-207ENST00000619655 ZNF124Q15973 351 aa15.38■□□□□ 0.05
MMP28-207ENST00000619655 RBPMS2Q6ZRY4 209 aaKnown RBP15.38■□□□□ 0.05
MMP28-207ENST00000619655 ARL6IP6Q8N6S5 226 aa15.38■□□□□ 0.05
MMP28-207ENST00000619655 HECTD1Q9ULT8 2610 aa15.38■□□□□ 0.05
MMP28-207ENST00000619655 SH2D1AO60880 128 aa15.38■□□□□ 0.05
MMP28-207ENST00000619655 ZNF664Q8N3J9 261 aa15.38■□□□□ 0.05
MMP28-207ENST00000619655 GFRA4Q9GZZ7 299 aa15.38■□□□□ 0.05
MMP28-207ENST00000619655 DAZ1Q9NQZ3 744 aaKnown RBP15.38■□□□□ 0.05
MMP28-207ENST00000619655 F2Z2F3 143 aa15.37■□□□□ 0.05
MMP28-207ENST00000619655 NUPR1O60356 82 aa15.37■□□□□ 0.05
MMP28-207ENST00000619655 FAM162BQ5T6X4 162 aa15.37■□□□□ 0.05
MMP28-207ENST00000619655 RHPN1-AS1Q9BWJ2 59 aa15.37■□□□□ 0.05
MMP28-207ENST00000619655 A0A1W2PS18 150 aa15.37■□□□□ 0.05
MMP28-207ENST00000619655 SRIP30626 198 aa15.37■□□□□ 0.05
MMP28-207ENST00000619655 FAM106AQ4KMX7 169 aa15.37■□□□□ 0.05
MMP28-207ENST00000619655 BAGE3Q86Y29 109 aa15.37■□□□□ 0.05
MMP28-207ENST00000619655 WIPF2Q8TF74 440 aaPredicted RBP15.37■□□□□ 0.05
MMP28-207ENST00000619655 NDFIP1Q9BT67 221 aa15.37■□□□□ 0.05
MMP28-207ENST00000619655 IGHV7-4-1A0A0J9YVY3 117 aa15.36■□□□□ 0.05
MMP28-207ENST00000619655 ZNF705DP0CH99 300 aaPredicted RBP15.36■□□□□ 0.05
MMP28-207ENST00000619655 ZNF705BP0CI00 300 aaPredicted RBP15.36■□□□□ 0.05
MMP28-207ENST00000619655 ZNF80P51504 273 aaPredicted RBP15.36■□□□□ 0.05
MMP28-207ENST00000619655 HBBP68871 147 aa15.36■□□□□ 0.05
MMP28-207ENST00000619655 RASL11AQ6T310 242 aa15.36■□□□□ 0.05
MMP28-207ENST00000619655 ATP5L2Q7Z4Y8 100 aa15.36■□□□□ 0.05
MMP28-207ENST00000619655 SRD5A1P18405 259 aa15.35■□□□□ 0.05
MMP28-207ENST00000619655 TP53TG3Q9ULZ0 132 aa15.35■□□□□ 0.05
MMP28-207ENST00000619655 FASNP49327 2511 aaKnown RBP15.35■□□□□ 0.05
MMP28-207ENST00000619655 A0A1B0GXF2 115 aa15.35■□□□□ 0.05
MMP28-207ENST00000619655 GPHB5Q86YW7 130 aa15.35■□□□□ 0.05
MMP28-207ENST00000619655 FBLL1A6NHQ2 334 aaKnown RBP15.34■□□□□ 0.05
MMP28-207ENST00000619655 ZNF738Q8NE65 137 aa15.34■□□□□ 0.05
MMP28-207ENST00000619655 C20orf173Q96LM9 149 aa15.34■□□□□ 0.05
MMP28-207ENST00000619655 NF1P21359 2839 aa15.34■□□□□ 0.05
MMP28-207ENST00000619655 TMEM89A2RUT3 159 aa15.34■□□□□ 0.05
MMP28-207ENST00000619655 TMEM189A5PLL7 270 aa15.34■□□□□ 0.05
MMP28-207ENST00000619655 FAM181BA6NEQ2 426 aa15.34■□□□□ 0.05
MMP28-207ENST00000619655 AGPAT4-IT1Q9H0P7 198 aa15.34■□□□□ 0.05
MMP28-207ENST00000619655 FAM231BA6NCW3 169 aa15.33■□□□□ 0.05
MMP28-207ENST00000619655 SERF1AO75920 110 aa15.33■□□□□ 0.05
MMP28-207ENST00000619655 FOXE3Q13461 319 aa15.33■□□□□ 0.05
MMP28-207ENST00000619655 TMEM78Q5T7P6 136 aa15.33■□□□□ 0.05
MMP28-207ENST00000619655 YAE1D1Q9NRH1 226 aa15.33■□□□□ 0.04
MMP28-207ENST00000619655 RBAKDNA6NC62 111 aa15.32■□□□□ 0.04
MMP28-207ENST00000619655 ELANEP08246 267 aa15.32■□□□□ 0.04
MMP28-207ENST00000619655 ARMS2P0C7Q2 107 aa15.32■□□□□ 0.04
MMP28-207ENST00000619655 DEFB1P60022 68 aa15.32■□□□□ 0.04
MMP28-207ENST00000619655 FOXC2Q99958 501 aa15.32■□□□□ 0.04
MMP28-207ENST00000619655 NRN1Q9NPD7 142 aa15.32■□□□□ 0.04
MMP28-207ENST00000619655 SMPXQ9UHP9 88 aa15.32■□□□□ 0.04
MMP28-207ENST00000619655 TCAPO15273 167 aa15.31■□□□□ 0.04
MMP28-207ENST00000619655 LINC00310P59036 64 aa15.31■□□□□ 0.04
MMP28-207ENST00000619655 NUTF2P61970 127 aaKnown RBP15.31■□□□□ 0.04
MMP28-207ENST00000619655 MUC21A0A0G2JKD1 596 aa15.31■□□□□ 0.04
MMP28-207ENST00000619655 MUC21A0A140T8X8 626 aa15.31■□□□□ 0.04
MMP28-207ENST00000619655 ORM1P02763 201 aa15.31■□□□□ 0.04
MMP28-207ENST00000619655 LGALS1P09382 135 aaKnown RBP15.31■□□□□ 0.04
MMP28-207ENST00000619655 IQCJQ1A5X6 159 aa15.31■□□□□ 0.04
MMP28-207ENST00000619655 MUC21Q5SSG8 566 aa15.31■□□□□ 0.04
MMP28-207ENST00000619655 MRPL53Q96EL3 112 aaKnown RBP15.31■□□□□ 0.04
MMP28-207ENST00000619655 IGHV4OR15-8A0A075B7B6 117 aa15.3■□□□□ 0.04
MMP28-207ENST00000619655 A0A087WW49 117 aa15.3■□□□□ 0.04
MMP28-207ENST00000619655 BMI1P35226 326 aa15.3■□□□□ 0.04
MMP28-207ENST00000619655 SYNJ2BPP57105 145 aa15.3■□□□□ 0.04
MMP28-207ENST00000619655 KRTAP1-1Q07627 177 aa15.3■□□□□ 0.04
MMP28-207ENST00000619655 HIST2H2BDQ6DRA6 164 aa15.3■□□□□ 0.04
MMP28-207ENST00000619655 COX8CQ7Z4L0 72 aa15.3■□□□□ 0.04
MMP28-207ENST00000619655 TEX29Q8N6K0 151 aa15.3■□□□□ 0.04
MMP28-207ENST00000619655 UFC1Q9Y3C8 167 aa15.3■□□□□ 0.04
MMP28-207ENST00000619655 A0A1B0GUT8 65 aa15.29■□□□□ 0.04
MMP28-207ENST00000619655 DNAJC9-AS1A6NH13 148 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms