RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 TRAV5A0A0B4J249 113 aa8.29□□□□□ -1.08
UPF3B-204ENST00000619445 KLLNB2CW77 178 aa8.29□□□□□ -1.08
UPF3B-204ENST00000619445 FGF7P21781 194 aa8.29□□□□□ -1.08
UPF3B-204ENST00000619445 TNP2Q05952 138 aa8.29□□□□□ -1.08
UPF3B-204ENST00000619445 SLAQ13239 276 aa8.29□□□□□ -1.08
UPF3B-204ENST00000619445 IL15RAQ13261 267 aa8.29□□□□□ -1.08
UPF3B-204ENST00000619445 RAB32Q13637 225 aa8.29□□□□□ -1.08
UPF3B-204ENST00000619445 KIR3DS1Q14943 382 aa8.29□□□□□ -1.08
UPF3B-204ENST00000619445 C4orf48Q5BLP8 95 aa8.29□□□□□ -1.08
UPF3B-204ENST00000619445 TMEM78Q5T7P6 136 aa8.29□□□□□ -1.08
UPF3B-204ENST00000619445 ZNF575Q86XF7 245 aa8.29□□□□□ -1.08
UPF3B-204ENST00000619445 EIF4E3Q8N5X7 224 aaKnown RBP8.29□□□□□ -1.08
UPF3B-204ENST00000619445 GPN1Q9HCN4 374 aaPredicted RBP8.29□□□□□ -1.08
UPF3B-204ENST00000619445 MRPS16Q9Y3D3 137 aaKnown RBP8.29□□□□□ -1.08
UPF3B-204ENST00000619445 TRBV7-9A0A0J9YWB2 115 aa8.28□□□□□ -1.08
UPF3B-204ENST00000619445 IGSF23A1L1A6 192 aa8.28□□□□□ -1.08
UPF3B-204ENST00000619445 CRISP2P16562 243 aa8.28□□□□□ -1.08
UPF3B-204ENST00000619445 CYCSP99999 105 aaKnown RBP8.28□□□□□ -1.08
UPF3B-204ENST00000619445 IBA57Q5T440 356 aaKnown RBP8.28□□□□□ -1.08
UPF3B-204ENST00000619445 C9orf47Q6ZRZ4 202 aa8.28□□□□□ -1.08
UPF3B-204ENST00000619445 S100ZQ8WXG8 99 aa8.28□□□□□ -1.08
UPF3B-204ENST00000619445 NPCDR1Q9BY65 106 aa8.28□□□□□ -1.08
UPF3B-204ENST00000619445 PARD6GQ9BYG4 376 aaPredicted RBP8.28□□□□□ -1.08
UPF3B-204ENST00000619445 A0A0J9YY99 117 aa8.27□□□□□ -1.09
UPF3B-204ENST00000619445 E5RGE8 158 aa8.27□□□□□ -1.09
UPF3B-204ENST00000619445 J3KRW8 73 aa8.27□□□□□ -1.09
UPF3B-204ENST00000619445 GPX1P07203 203 aa8.27□□□□□ -1.09
UPF3B-204ENST00000619445 HOXA5P20719 270 aa8.27□□□□□ -1.09
UPF3B-204ENST00000619445 FAM19A4Q96LR4 140 aa8.27□□□□□ -1.09
UPF3B-204ENST00000619445 MRPL32Q9BYC8 188 aaKnown RBP8.27□□□□□ -1.09
UPF3B-204ENST00000619445 RYR1P21817 5038 aa8.26□□□□□ -1.09
UPF3B-204ENST00000619445 C17orf112F2Z3M2 114 aa8.26□□□□□ -1.09
UPF3B-204ENST00000619445 M0R3E3 92 aa8.26□□□□□ -1.09
UPF3B-204ENST00000619445 RGS13O14921 159 aa8.26□□□□□ -1.09
UPF3B-204ENST00000619445 ZNF324O75467 553 aaPredicted RBP8.26□□□□□ -1.09
UPF3B-204ENST00000619445 NDUFB4O95168 129 aa8.26□□□□□ -1.09
UPF3B-204ENST00000619445 TCL1AP56279 114 aa8.26□□□□□ -1.09
UPF3B-204ENST00000619445 Q6ZTI0 123 aa8.26□□□□□ -1.09
UPF3B-204ENST00000619445 C11orf72Q8NBR9 251 aa8.26□□□□□ -1.09
UPF3B-204ENST00000619445 AGPAT4-IT1Q9H0P7 198 aa8.26□□□□□ -1.09
UPF3B-204ENST00000619445 TMPRSS5Q9H3S3 457 aa8.26□□□□□ -1.09
UPF3B-204ENST00000619445 GSN-AS1Q9NRJ2 163 aa8.26□□□□□ -1.09
UPF3B-204ENST00000619445 FUT9Q9Y231 359 aa8.26□□□□□ -1.09
UPF3B-204ENST00000619445 TRGV1A0A0A0MS02 117 aa8.25□□□□□ -1.09
UPF3B-204ENST00000619445 PRAF2O60831 178 aa8.25□□□□□ -1.09
UPF3B-204ENST00000619445 NBEAP1P0C6P0 100 aa8.25□□□□□ -1.09
UPF3B-204ENST00000619445 PRB4P10163 310 aaPredicted RBP8.25□□□□□ -1.09
UPF3B-204ENST00000619445 RNASE4P34096 147 aaKnown RBP8.25□□□□□ -1.09
UPF3B-204ENST00000619445 CSN1S1P47710 185 aa8.25□□□□□ -1.09
UPF3B-204ENST00000619445 ASAH1Q13510 395 aa8.25□□□□□ -1.09
UPF3B-204ENST00000619445 ESRGQ1W209 222 aa8.25□□□□□ -1.09
UPF3B-204ENST00000619445 LYPD1Q8N2G4 141 aa8.25□□□□□ -1.09
UPF3B-204ENST00000619445 OR5C1Q8NGR4 320 aa8.25□□□□□ -1.09
UPF3B-204ENST00000619445 ENKURQ8TC29 256 aa8.25□□□□□ -1.09
UPF3B-204ENST00000619445 BLNKQ8WV28 456 aa8.25□□□□□ -1.09
UPF3B-204ENST00000619445 ARPC5LQ9BPX5 153 aa8.25□□□□□ -1.09
UPF3B-204ENST00000619445 NMES1Q9C002 83 aa8.25□□□□□ -1.09
UPF3B-204ENST00000619445 OR51M1Q9H341 326 aa8.25□□□□□ -1.09
UPF3B-204ENST00000619445 RBAKDNA6NC62 111 aa8.24□□□□□ -1.09
UPF3B-204ENST00000619445 SPINK4O60575 86 aa8.24□□□□□ -1.09
UPF3B-204ENST00000619445 PET100P0DJ07 73 aa8.24□□□□□ -1.09
UPF3B-204ENST00000619445 PYYP10082 97 aa8.24□□□□□ -1.09
UPF3B-204ENST00000619445 ERCC8Q13216 396 aa8.24□□□□□ -1.09
UPF3B-204ENST00000619445 ICAM4Q14773 271 aa8.24□□□□□ -1.09
UPF3B-204ENST00000619445 EXOC3-AS1Q8N2X6 119 aa8.24□□□□□ -1.09
UPF3B-204ENST00000619445 ST6GAL2Q96JF0 529 aa8.24□□□□□ -1.09
UPF3B-204ENST00000619445 PAXXQ9BUH6 204 aa8.24□□□□□ -1.09
UPF3B-204ENST00000619445 SLC25A2Q9BXI2 301 aa8.24□□□□□ -1.09
UPF3B-204ENST00000619445 LENEPQ9Y5L5 61 aa8.24□□□□□ -1.09
UPF3B-204ENST00000619445 ICOSQ9Y6W8 199 aa8.24□□□□□ -1.09
UPF3B-204ENST00000619445 IGHV1OR15-1A0A075B7D0 117 aa8.23□□□□□ -1.09
UPF3B-204ENST00000619445 A0A096LPF7 62 aa8.23□□□□□ -1.09
UPF3B-204ENST00000619445 K7EP13 123 aa8.23□□□□□ -1.09
UPF3B-204ENST00000619445 PAX4O43316 350 aa8.23□□□□□ -1.09
UPF3B-204ENST00000619445 ZNF138P52744 262 aa8.23□□□□□ -1.09
UPF3B-204ENST00000619445 CD300CQ08708 224 aa8.23□□□□□ -1.09
UPF3B-204ENST00000619445 BTN1A1Q13410 526 aa8.23□□□□□ -1.09
UPF3B-204ENST00000619445 FAM167A-AS1Q96KT0 104 aa8.23□□□□□ -1.09
UPF3B-204ENST00000619445 VGLL1Q99990 258 aa8.23□□□□□ -1.09
UPF3B-204ENST00000619445 ZNF492Q9P255 531 aa8.23□□□□□ -1.09
UPF3B-204ENST00000619445 PRO0255Q9UI72 69 aa8.23□□□□□ -1.09
UPF3B-204ENST00000619445 EREGO14944 169 aa8.22□□□□□ -1.09
UPF3B-204ENST00000619445 SIVA1O15304 175 aa8.22□□□□□ -1.09
UPF3B-204ENST00000619445 TAS2R45P59539 299 aa8.22□□□□□ -1.09
UPF3B-204ENST00000619445 NHLH2Q02577 135 aa8.22□□□□□ -1.09
UPF3B-204ENST00000619445 ZNF415Q09FC8 603 aa8.22□□□□□ -1.09
UPF3B-204ENST00000619445 MRPL23Q16540 153 aaKnown RBP8.22□□□□□ -1.09
UPF3B-204ENST00000619445 FAM122CQ6P4D5 195 aa8.22□□□□□ -1.09
UPF3B-204ENST00000619445 SPATA12Q7Z6I5 190 aa8.22□□□□□ -1.09
UPF3B-204ENST00000619445 ZFAND2AQ8N6M9 145 aa8.22□□□□□ -1.09
UPF3B-204ENST00000619445 THAP6Q8TBB0 222 aa8.22□□□□□ -1.09
UPF3B-204ENST00000619445 VSIG2Q96IQ7 327 aa8.22□□□□□ -1.09
UPF3B-204ENST00000619445 WDR61Q9GZS3 305 aaKnown RBP8.22□□□□□ -1.09
UPF3B-204ENST00000619445 KLF12Q9Y4X4 402 aa8.22□□□□□ -1.09
UPF3B-204ENST00000619445 TRAV9-2A0A087WT02 112 aa8.22□□□□□ -1.09
UPF3B-204ENST00000619445 IGKV2-40A0A087WW87 121 aaPredicted RBP8.22□□□□□ -1.09
UPF3B-204ENST00000619445 OR7C2O60412 319 aa8.22□□□□□ -1.09
UPF3B-204ENST00000619445 IGKV2D-40P01614 121 aaPredicted RBP8.22□□□□□ -1.09
UPF3B-204ENST00000619445 GCSAMLQ5JQS6 135 aa8.22□□□□□ -1.09
UPF3B-204ENST00000619445 MIR17HGQ75NE6 70 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms