RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 TSPOP30536 169 aa17.81■□□□□ 0.44
PMS1-220ENST00000618056 TCTAP57738 103 aa17.81■□□□□ 0.44
PMS1-220ENST00000618056 RNF141Q8WVD5 230 aa17.81■□□□□ 0.44
PMS1-220ENST00000618056 MED9Q9NWA0 146 aa17.81■□□□□ 0.44
PMS1-220ENST00000618056 OR7C2O60412 319 aa17.8■□□□□ 0.44
PMS1-220ENST00000618056 OR10J4P0C629 311 aa17.8■□□□□ 0.44
PMS1-220ENST00000618056 TAS2R45P59539 299 aa17.8■□□□□ 0.44
PMS1-220ENST00000618056 KHDC3LQ587J8 217 aa17.8■□□□□ 0.44
PMS1-220ENST00000618056 EXOC3-AS1Q8N2X6 119 aa17.8■□□□□ 0.44
PMS1-220ENST00000618056 TMED6Q8WW62 240 aa17.8■□□□□ 0.44
PMS1-220ENST00000618056 ZNF503Q96F45 646 aa17.8■□□□□ 0.44
PMS1-220ENST00000618056 C20orf144Q9BQM9 153 aa17.8■□□□□ 0.44
PMS1-220ENST00000618056 M6PRP20645 277 aa17.79■□□□□ 0.44
PMS1-220ENST00000618056 ICAM4Q14773 271 aa17.79■□□□□ 0.44
PMS1-220ENST00000618056 ACOT6Q3I5F7 207 aaPredicted RBP17.79■□□□□ 0.44
PMS1-220ENST00000618056 FAM222AQ5U5X8 452 aa17.79■□□□□ 0.44
PMS1-220ENST00000618056 CT45A10P0DMU9 189 aa17.78■□□□□ 0.44
PMS1-220ENST00000618056 KMT2AQ03164 3969 aa17.78■□□□□ 0.44
PMS1-220ENST00000618056 YTHDF2Q9Y5A9 579 aaKnown RBP17.78■□□□□ 0.44
PMS1-220ENST00000618056 ZNF705GA8MUZ8 300 aaPredicted RBP17.77■□□□□ 0.44
PMS1-220ENST00000618056 OR2G3Q8NGZ4 309 aa17.77■□□□□ 0.44
PMS1-220ENST00000618056 LINC01587Q99440 93 aa17.77■□□□□ 0.44
PMS1-220ENST00000618056 TAS2R60P59551 318 aa17.76■□□□□ 0.43
PMS1-220ENST00000618056 UBE2L3P68036 154 aaKnown RBP17.76■□□□□ 0.43
PMS1-220ENST00000618056 KIR3DS1Q14943 382 aa17.76■□□□□ 0.43
PMS1-220ENST00000618056 LYPD1Q8N2G4 141 aa17.76■□□□□ 0.43
PMS1-220ENST00000618056 LINC00477Q96M19 166 aa17.76■□□□□ 0.43
PMS1-220ENST00000618056 PSMG3Q9BT73 122 aaPredicted RBP17.76■□□□□ 0.43
PMS1-220ENST00000618056 DEFB131BA0A096LNP1 70 aa17.75■□□□□ 0.43
PMS1-220ENST00000618056 IGLL5B9A064 214 aa17.75■□□□□ 0.43
PMS1-220ENST00000618056 PRM2P04554 102 aa17.75■□□□□ 0.43
PMS1-220ENST00000618056 LEPP41159 167 aa17.75■□□□□ 0.43
PMS1-220ENST00000618056 GFI1BQ5VTD9 330 aa17.75■□□□□ 0.43
PMS1-220ENST00000618056 HSD17B11Q8NBQ5 300 aa17.75■□□□□ 0.43
PMS1-220ENST00000618056 NIPSNAP3BQ9BS92 247 aa17.75■□□□□ 0.43
PMS1-220ENST00000618056 H7BYZ3 331 aa17.75■□□□□ 0.43
PMS1-220ENST00000618056 LY6G6CO95867 125 aa17.75■□□□□ 0.43
PMS1-220ENST00000618056 RAB2AP61019 212 aa17.75■□□□□ 0.43
PMS1-220ENST00000618056 PQLC2Q6ZP29 291 aa17.75■□□□□ 0.43
PMS1-220ENST00000618056 C9orf47Q6ZRZ4 202 aa17.75■□□□□ 0.43
PMS1-220ENST00000618056 A0A1W2PPV4 95 aa17.74■□□□□ 0.43
PMS1-220ENST00000618056 LGALS9CQ6DKI2 356 aa17.74■□□□□ 0.43
PMS1-220ENST00000618056 FAM122CQ6P4D5 195 aa17.74■□□□□ 0.43
PMS1-220ENST00000618056 APLNQ9ULZ1 77 aa17.74■□□□□ 0.43
PMS1-220ENST00000618056 PLAC8L1A1L4L8 177 aa17.73■□□□□ 0.43
PMS1-220ENST00000618056 AZU1P20160 251 aa17.73■□□□□ 0.43
PMS1-220ENST00000618056 ATP6V0CP27449 155 aa17.73■□□□□ 0.43
PMS1-220ENST00000618056 SERF2P84101 59 aa17.73■□□□□ 0.43
PMS1-220ENST00000618056 ERCC8Q13216 396 aa17.73■□□□□ 0.43
PMS1-220ENST00000618056 OR10G4Q8NGN3 311 aa17.73■□□□□ 0.43
PMS1-220ENST00000618056 OR10G9Q8NGN4 311 aa17.73■□□□□ 0.43
PMS1-220ENST00000618056 OR10G7Q8NGN6 311 aa17.73■□□□□ 0.43
PMS1-220ENST00000618056 FAM19A4Q96LR4 140 aa17.73■□□□□ 0.43
PMS1-220ENST00000618056 AGPAT4-IT1Q9H0P7 198 aa17.73■□□□□ 0.43
PMS1-220ENST00000618056 VPS13DQ5THJ4 4388 aa17.72■□□□□ 0.43
PMS1-220ENST00000618056 LYRM9A8MSI8 78 aa17.72■□□□□ 0.43
PMS1-220ENST00000618056 SEC11BP0C7V7 166 aa17.72■□□□□ 0.43
PMS1-220ENST00000618056 SULT1A2P50226 295 aa17.72■□□□□ 0.43
PMS1-220ENST00000618056 RANP62826 216 aaKnown RBP17.72■□□□□ 0.43
PMS1-220ENST00000618056 IGHV4-4A0A075B6R2 117 aa17.71■□□□□ 0.43
PMS1-220ENST00000618056 ZNF493Q6ZR52 646 aa17.71■□□□□ 0.43
PMS1-220ENST00000618056 C16orf74Q96GX8 76 aa17.71■□□□□ 0.43
PMS1-220ENST00000618056 Q9H3A6 140 aa17.71■□□□□ 0.43
PMS1-220ENST00000618056 IGKV2-40A0A087WW87 121 aaPredicted RBP17.7■□□□□ 0.42
PMS1-220ENST00000618056 KLLNB2CW77 178 aa17.7■□□□□ 0.42
PMS1-220ENST00000618056 IGKV2D-40P01614 121 aaPredicted RBP17.7■□□□□ 0.42
PMS1-220ENST00000618056 SLC25A5P05141 298 aaKnown RBP17.7■□□□□ 0.42
PMS1-220ENST00000618056 CRISP2P16562 243 aa17.7■□□□□ 0.42
PMS1-220ENST00000618056 EIF3GO75821 320 aaKnown RBP eCLIP17.69■□□□□ 0.42
PMS1-220ENST00000618056 MBP02144 154 aa17.69■□□□□ 0.42
PMS1-220ENST00000618056 CSN1S1P47710 185 aa17.69■□□□□ 0.42
PMS1-220ENST00000618056 CDC34P49427 236 aaPredicted RBP17.69■□□□□ 0.42
PMS1-220ENST00000618056 TMEM78Q5T7P6 136 aa17.69■□□□□ 0.42
PMS1-220ENST00000618056 RNASE8Q8TDE3 154 aaKnown RBP17.69■□□□□ 0.42
PMS1-220ENST00000618056 TMEM263Q8WUH6 116 aaKnown RBP17.69■□□□□ 0.42
PMS1-220ENST00000618056 PLA2G2EQ9NZK7 142 aa17.69■□□□□ 0.42
PMS1-220ENST00000618056 RBAKDNA6NC62 111 aa17.69■□□□□ 0.42
PMS1-220ENST00000618056 J3KRW8 73 aa17.69■□□□□ 0.42
PMS1-220ENST00000618056 HTN1P15515 57 aa17.69■□□□□ 0.42
PMS1-220ENST00000618056 DAD1P61803 113 aa17.69■□□□□ 0.42
PMS1-220ENST00000618056 GNPNAT1Q96EK6 184 aaPredicted RBP17.69■□□□□ 0.42
PMS1-220ENST00000618056 VGLL1Q99990 258 aa17.69■□□□□ 0.42
PMS1-220ENST00000618056 TRAV12-3A0A0B4J271 114 aa17.68■□□□□ 0.42
PMS1-220ENST00000618056 TRBV7-9A0A0J9YWB2 115 aa17.68■□□□□ 0.42
PMS1-220ENST00000618056 BLOC1S1P78537 153 aa17.68■□□□□ 0.42
PMS1-220ENST00000618056 TOR2AQ5JU69 321 aa17.68■□□□□ 0.42
PMS1-220ENST00000618056 SH3BGRL3Q9H299 93 aa17.68■□□□□ 0.42
PMS1-220ENST00000618056 ZNF492Q9P255 531 aa17.68■□□□□ 0.42
PMS1-220ENST00000618056 C7orf71A4D174 169 aa17.67■□□□□ 0.42
PMS1-220ENST00000618056 STAG3L2P0CL84 134 aa17.67■□□□□ 0.42
PMS1-220ENST00000618056 STAG3L3P0CL85 134 aa17.67■□□□□ 0.42
PMS1-220ENST00000618056 RXFP4Q8TDU9 374 aa17.67■□□□□ 0.42
PMS1-220ENST00000618056 PYGO2Q9BRQ0 406 aa17.67■□□□□ 0.42
PMS1-220ENST00000618056 OTORQ9NRC9 128 aa17.67■□□□□ 0.42
PMS1-220ENST00000618056 DNAH6Q9C0G6 4158 aa17.67■□□□□ 0.42
PMS1-220ENST00000618056 TEX46H3BTG2 121 aa17.66■□□□□ 0.42
PMS1-220ENST00000618056 RAB5CP51148 216 aa17.66■□□□□ 0.42
PMS1-220ENST00000618056 EIF4E3Q8N5X7 224 aaKnown RBP17.66■□□□□ 0.42
PMS1-220ENST00000618056 RAB24Q969Q5 203 aa17.66■□□□□ 0.42
PMS1-220ENST00000618056 FAM210BQ96KR6 192 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms