RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 ACTL6BO94805 426 aa6.51□□□□□ -1.37
GPC6-202ENST00000617456 RBMY1DP0C7P1 496 aaKnown RBP6.51□□□□□ -1.37
GPC6-202ENST00000617456 DUTP33316 252 aaKnown RBP6.51□□□□□ -1.37
GPC6-202ENST00000617456 SMCPP49901 116 aaPredicted RBP6.51□□□□□ -1.37
GPC6-202ENST00000617456 ARFRP1Q13795 201 aa6.51□□□□□ -1.37
GPC6-202ENST00000617456 ADIRFQ15847 76 aa6.51□□□□□ -1.37
GPC6-202ENST00000617456 VMA21Q3ZAQ7 101 aa6.51□□□□□ -1.37
GPC6-202ENST00000617456 ZNF506Q5JVG8 444 aa6.51□□□□□ -1.37
GPC6-202ENST00000617456 Q6ZVH6 145 aa6.51□□□□□ -1.37
GPC6-202ENST00000617456 NR2C2APQ86WQ0 139 aa6.51□□□□□ -1.37
GPC6-202ENST00000617456 ZNF645Q8N7E2 425 aa6.51□□□□□ -1.37
GPC6-202ENST00000617456 SYT8Q8NBV8 401 aa6.51□□□□□ -1.37
GPC6-202ENST00000617456 VSTM2AQ8TAG5 236 aa6.51□□□□□ -1.37
GPC6-202ENST00000617456 CYYR1Q96J86 154 aa6.51□□□□□ -1.37
GPC6-202ENST00000617456 RNF126Q9BV68 326 aa6.51□□□□□ -1.37
GPC6-202ENST00000617456 EIF5A2Q9GZV4 153 aaKnown RBP6.51□□□□□ -1.37
GPC6-202ENST00000617456 OR2D2Q9H210 308 aa6.51□□□□□ -1.37
GPC6-202ENST00000617456 FNDC4Q9H6D8 234 aaPredicted RBP6.51□□□□□ -1.37
GPC6-202ENST00000617456 RPRMQ9NS64 109 aa6.51□□□□□ -1.37
GPC6-202ENST00000617456 ANXA10Q9UJ72 324 aa6.51□□□□□ -1.37
GPC6-202ENST00000617456 OR2W1Q9Y3N9 320 aa6.51□□□□□ -1.37
GPC6-202ENST00000617456 TRGV3P03979 118 aa6.5□□□□□ -1.37
GPC6-202ENST00000617456 PMCHP20382 165 aa6.5□□□□□ -1.37
GPC6-202ENST00000617456 EWSR1Q01844 656 aaKnown RBP eCLIP6.5□□□□□ -1.37
GPC6-202ENST00000617456 KLF5Q13887 457 aaPredicted RBP6.5□□□□□ -1.37
GPC6-202ENST00000617456 KLK9Q2XQG4 91 aa6.5□□□□□ -1.37
GPC6-202ENST00000617456 SLC25A42Q86VD7 318 aa6.5□□□□□ -1.37
GPC6-202ENST00000617456 HSD17B10Q99714 261 aaKnown RBP6.5□□□□□ -1.37
GPC6-202ENST00000617456 SPANXB1Q9NS25 103 aaPredicted RBP6.5□□□□□ -1.37
GPC6-202ENST00000617456 MTFP1Q9UDX5 166 aa6.5□□□□□ -1.37
GPC6-202ENST00000617456 KLK9Q9UKQ9 250 aa6.5□□□□□ -1.37
GPC6-202ENST00000617456 TEX48A0A1B0GUV7 120 aa6.49□□□□□ -1.37
GPC6-202ENST00000617456 RBFOX3A6NFN3 312 aa6.49□□□□□ -1.37
GPC6-202ENST00000617456 FAM223BA6NKX1 122 aa6.49□□□□□ -1.37
GPC6-202ENST00000617456 SRRM4A7MD48 611 aaKnown RBP6.49□□□□□ -1.37
GPC6-202ENST00000617456 NPIPB5A8MRT5 1133 aa6.49□□□□□ -1.37
GPC6-202ENST00000617456 C17orf112F2Z3M2 114 aa6.49□□□□□ -1.37
GPC6-202ENST00000617456 IGLV1-51P01701 117 aa6.49□□□□□ -1.37
GPC6-202ENST00000617456 TAS2R46P59540 309 aa6.49□□□□□ -1.37
GPC6-202ENST00000617456 Q0VG73 95 aa6.49□□□□□ -1.37
GPC6-202ENST00000617456 ERASQ7Z444 233 aa6.49□□□□□ -1.37
GPC6-202ENST00000617456 FAM223AQ8IWN6 122 aa6.49□□□□□ -1.37
GPC6-202ENST00000617456 MMD2Q8IY49 270 aa6.49□□□□□ -1.37
GPC6-202ENST00000617456 OR2K2Q8NGT1 345 aa6.49□□□□□ -1.37
GPC6-202ENST00000617456 OR4A5Q8NH83 315 aa6.49□□□□□ -1.37
GPC6-202ENST00000617456 IL17DQ8TAD2 202 aa6.49□□□□□ -1.37
GPC6-202ENST00000617456 CMTM2Q8TAZ6 248 aa6.49□□□□□ -1.37
GPC6-202ENST00000617456 GGTLC1Q9BX51 225 aa6.49□□□□□ -1.37
GPC6-202ENST00000617456 SPANXDQ9BXN6 97 aa6.49□□□□□ -1.37
GPC6-202ENST00000617456 TRAV9-2A0A087WT02 112 aa6.48□□□□□ -1.37
GPC6-202ENST00000617456 TRBV9A0A0B4J1U6 114 aa6.48□□□□□ -1.37
GPC6-202ENST00000617456 F8W1H4 67 aa6.48□□□□□ -1.37
GPC6-202ENST00000617456 TMEM250H0YL14 139 aa6.48□□□□□ -1.37
GPC6-202ENST00000617456 M0R2Z0 102 aa6.48□□□□□ -1.37
GPC6-202ENST00000617456 LY6G6CO95867 125 aa6.48□□□□□ -1.37
GPC6-202ENST00000617456 SPINK8P0C7L1 97 aa6.48□□□□□ -1.37
GPC6-202ENST00000617456 OR9G9P0C7N8 305 aa6.48□□□□□ -1.37
GPC6-202ENST00000617456 KIR2DS2P43631 304 aa6.48□□□□□ -1.37
GPC6-202ENST00000617456 LINC00205P59089 165 aa6.48□□□□□ -1.37
GPC6-202ENST00000617456 UBE2MP61081 183 aaKnown RBP6.48□□□□□ -1.37
GPC6-202ENST00000617456 MRGPRG-AS1Q2M3A8 158 aa6.48□□□□□ -1.37
GPC6-202ENST00000617456 DPPA3Q6W0C5 159 aa6.48□□□□□ -1.37
GPC6-202ENST00000617456 OR51G1Q8NGK1 321 aa6.48□□□□□ -1.37
GPC6-202ENST00000617456 ATP6V0E2Q8NHE4 81 aa6.48□□□□□ -1.37
GPC6-202ENST00000617456 PMCHL2Q9BQD1 86 aa6.48□□□□□ -1.37
GPC6-202ENST00000617456 FAM103A1Q9BTL3 118 aaKnown RBP6.48□□□□□ -1.37
GPC6-202ENST00000617456 MRPL32Q9BYC8 188 aaKnown RBP6.48□□□□□ -1.37
GPC6-202ENST00000617456 SMIM3Q9BZL3 60 aa6.48□□□□□ -1.37
GPC6-202ENST00000617456 FRAS1Q86XX4 4008 aa6.48□□□□□ -1.37
GPC6-202ENST00000617456 DUXBA0A1W2PPF3 345 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 MEIS3P1A6NDR6 274 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 LINC00473A8K010 186 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 DIRC3C9JPN6 131 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 J3KT08 172 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 EIF4EBP3O60516 100 aaPredicted RBP6.47□□□□□ -1.37
GPC6-202ENST00000617456 ZNF253O75346 499 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 KBTBD11O94819 623 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 HRASP01112 189 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 IGLV2-14P01704 120 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 PTHLHP12272 177 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 TIRAPP58753 221 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 EIF4EBP1Q13541 118 aaPredicted RBP6.47□□□□□ -1.37
GPC6-202ENST00000617456 PMVKQ15126 192 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 TIGITQ495A1 244 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 SIGLEC15Q6ZMC9 328 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 GTSCR1Q86UQ5 136 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 SRSF12Q8WXF0 261 aaKnown RBP6.47□□□□□ -1.37
GPC6-202ENST00000617456 SRSF8Q9BRL6 282 aaKnown RBP6.47□□□□□ -1.37
GPC6-202ENST00000617456 TM2D2Q9BX73 214 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 SDF2L1Q9HCN8 221 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 ZNF355PQ9NSJ1 428 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 PEMTQ9UBM1 199 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 ZNF257Q9Y2Q1 563 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 PXMP4Q9Y6I8 212 aa6.47□□□□□ -1.37
GPC6-202ENST00000617456 TRAV9-1A0A075B6T8 112 aa6.46□□□□□ -1.38
GPC6-202ENST00000617456 IGKV1D-8A0A087WSZ0 117 aa6.46□□□□□ -1.38
GPC6-202ENST00000617456 TRAV1-1A0A0B4J248 108 aa6.46□□□□□ -1.38
GPC6-202ENST00000617456 RHODO00212 210 aa6.46□□□□□ -1.38
GPC6-202ENST00000617456 KRASP01116 189 aa6.46□□□□□ -1.38
GPC6-202ENST00000617456 ORM2P19652 201 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms