RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	PRB4	P10163	310 aa	Predicted RBP	5.85	□□□□□ -1.47
PCDH15-231	ENST00000617271	MRAP	Q8TCY5	172 aa		5.85	□□□□□ -1.47
PCDH15-231	ENST00000617271		U3KQA8	63 aa		5.85	□□□□□ -1.47
PCDH15-231	ENST00000617271	RPL18A	Q02543	176 aa	Known RBP	5.85	□□□□□ -1.47
PCDH15-231	ENST00000617271	LINC01545	Q5VT33	79 aa		5.85	□□□□□ -1.47
PCDH15-231	ENST00000617271	VOPP1	Q96AW1	172 aa		5.85	□□□□□ -1.47
PCDH15-231	ENST00000617271	SPANXC	Q9NY87	97 aa		5.85	□□□□□ -1.47
PCDH15-231	ENST00000617271	TRAV12-2	A0A075B6T6	113 aa		5.85	□□□□□ -1.47
PCDH15-231	ENST00000617271	ETDC	A0A1B0GVM5	59 aa		5.85	□□□□□ -1.47
PCDH15-231	ENST00000617271		K7EQD1	137 aa		5.85	□□□□□ -1.47
PCDH15-231	ENST00000617271	MRPL51	Q4U2R6	128 aa	Known RBP	5.85	□□□□□ -1.47
PCDH15-231	ENST00000617271	BVES-AS1	Q5T3Y7	98 aa		5.85	□□□□□ -1.47
PCDH15-231	ENST00000617271	IGHV3-38	A0A0C4DH36	116 aa		5.84	□□□□□ -1.47
PCDH15-231	ENST00000617271	TMEM89	A2RUT3	159 aa		5.84	□□□□□ -1.47
PCDH15-231	ENST00000617271	SLC25A29	Q8N8R3	303 aa		5.84	□□□□□ -1.47
PCDH15-231	ENST00000617271	MYCNOS	P40205	109 aa		5.84	□□□□□ -1.47
PCDH15-231	ENST00000617271	ATRAID	Q6UW56	229 aa		5.84	□□□□□ -1.47
PCDH15-231	ENST00000617271		Q6ZR03	302 aa		5.84	□□□□□ -1.47
PCDH15-231	ENST00000617271	ZNF493	Q6ZR52	646 aa		5.84	□□□□□ -1.47
PCDH15-231	ENST00000617271	NOP10	Q9NPE3	64 aa	Known RBP	5.84	□□□□□ -1.47
PCDH15-231	ENST00000617271	ATG2B	Q96BY7	2078 aa		5.84	□□□□□ -1.47
PCDH15-231	ENST00000617271		A0A087X0K7	114 aa		5.84	□□□□□ -1.47
PCDH15-231	ENST00000617271	NXPH4	O95158	308 aa		5.84	□□□□□ -1.47
PCDH15-231	ENST00000617271	SMIM27	A0A1W2PRY6	76 aa		5.84	□□□□□ -1.47
PCDH15-231	ENST00000617271	COLCA2	A8K830	154 aa		5.84	□□□□□ -1.47
PCDH15-231	ENST00000617271	SHISA9	B4DS77	424 aa		5.84	□□□□□ -1.47
PCDH15-231	ENST00000617271	IGKV1-39	P01597	117 aa		5.84	□□□□□ -1.47
PCDH15-231	ENST00000617271	IGHG4	P01861	327 aa		5.84	□□□□□ -1.47
PCDH15-231	ENST00000617271	IGKV1D-39	P04432	117 aa		5.84	□□□□□ -1.47
PCDH15-231	ENST00000617271	THADA	Q6YHU6	1953 aa		5.84	□□□□□ -1.48
PCDH15-231	ENST00000617271		A0A0G2JRQ6	117 aa		5.84	□□□□□ -1.48
PCDH15-231	ENST00000617271	IL15RA	Q13261	267 aa		5.84	□□□□□ -1.48
PCDH15-231	ENST00000617271	LGALS9B	Q3B8N2	356 aa		5.84	□□□□□ -1.48
PCDH15-231	ENST00000617271	LGALS9C	Q6DKI2	356 aa		5.84	□□□□□ -1.48
PCDH15-231	ENST00000617271	GBF1	Q92538	1859 aa		5.84	□□□□□ -1.48
PCDH15-231	ENST00000617271	SLX1A	Q9BQ83	275 aa		5.83	□□□□□ -1.48
PCDH15-231	ENST00000617271		F8W735	103 aa	Predicted RBP	5.83	□□□□□ -1.48
PCDH15-231	ENST00000617271	C15orf65	H3BRN8	121 aa		5.83	□□□□□ -1.48
PCDH15-231	ENST00000617271	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	5.83	□□□□□ -1.48
PCDH15-231	ENST00000617271	ZNF124	Q15973	351 aa		5.83	□□□□□ -1.48
PCDH15-231	ENST00000617271	NPB	Q8NG41	125 aa		5.83	□□□□□ -1.48
PCDH15-231	ENST00000617271	FAM215A	Q9Y5M1	114 aa		5.83	□□□□□ -1.48
PCDH15-231	ENST00000617271		U3KQE9	123 aa		5.83	□□□□□ -1.48
PCDH15-231	ENST00000617271	PRSS47	A8MTI9	375 aa		5.83	□□□□□ -1.48
PCDH15-231	ENST00000617271	CITED1	Q99966	193 aa		5.83	□□□□□ -1.48
PCDH15-231	ENST00000617271	SPINK8	P0C7L1	97 aa		5.83	□□□□□ -1.48
PCDH15-231	ENST00000617271	DAZ2	Q13117	558 aa	Known RBP	5.83	□□□□□ -1.48
PCDH15-231	ENST00000617271	MLANA	Q16655	118 aa		5.83	□□□□□ -1.48
PCDH15-231	ENST00000617271	C4orf48	Q5BLP8	95 aa		5.83	□□□□□ -1.48
PCDH15-231	ENST00000617271	ADAMTSL5	Q6ZMM2	481 aa		5.83	□□□□□ -1.48
PCDH15-231	ENST00000617271	DAZ4	Q86SG3	579 aa	Known RBP	5.83	□□□□□ -1.48
PCDH15-231	ENST00000617271	CFHR4	Q92496	578 aa		5.83	□□□□□ -1.48
PCDH15-231	ENST00000617271	DAZ3	Q9NR90	486 aa	Known RBP	5.83	□□□□□ -1.48
PCDH15-231	ENST00000617271	TDRD6	O60522	2096 aa	Known RBP	5.83	□□□□□ -1.48
PCDH15-231	ENST00000617271	SCN5A	Q14524	2016 aa		5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271	NDUFB1	O75438	58 aa		5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271	PIFO	Q8TCI5	191 aa		5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271	SIGLEC8	Q9NYZ4	499 aa		5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271	ORMDL1	Q9P0S3	153 aa		5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271		A0A0J9YY99	117 aa		5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271	LOC105371267	A0A1B0GV96	52 aa		5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271	FUS	P35637	526 aa	Known RBP eCLIP	5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271	DAZAP2	Q15038	168 aa	Predicted RBP	5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271		A0A096LPF7	62 aa		5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271	hADV29S1	A0JD25	119 aa		5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271	BUB3	O43684	328 aa		5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271	IGHV4-59	P01825	116 aa		5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271	C14orf177	Q52M58	125 aa		5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271		C9JQL5	133 aa		5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271	POU2AF1	Q16633	256 aa		5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271	C4orf3	Q8WVX3	66 aa		5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271	CAMK2N2	Q96S95	79 aa		5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271	PRRC2B	Q5JSZ5	2229 aa	Known RBP	5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271	HAMP	P81172	84 aa		5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271	PPDPFL	Q8WWR9	84 aa		5.82	□□□□□ -1.48
PCDH15-231	ENST00000617271	IGKV1-6	A0A0C4DH72	117 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271	C9orf153	Q5TBE3	101 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271	PROK2	Q9HC23	129 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271	PDE4DIP	Q5VU43	2346 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271	CHKB-CPT1B	H3BT56	60 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271	IGLC1	P0CG04	106 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271	INSL3	P51460	131 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271	WDR86	Q86TI4	376 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271	ZNRD1	Q9P1U0	126 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271	LTA	P01374	205 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271	ATP6V0E2	Q8NHE4	81 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271	WIPF2	Q8TF74	440 aa	Predicted RBP	5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271	TRAV26-2	A0A0B4J265	109 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271	SIVA1	O15304	175 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271	LINC00205	P59089	165 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271	MPV17L2	Q567V2	206 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271		Q6ZQT7	251 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271		Q6ZRM9	215 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271	C18orf32	Q8TCD1	76 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271	CXCL5	P42830	114 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271	XCL1	P47992	114 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271	UBE2A	P49459	152 aa		5.81	□□□□□ -1.48
PCDH15-231	ENST00000617271		F8VRH5	84 aa		5.8	□□□□□ -1.48
PCDH15-231	ENST00000617271		J3QQQ9	107 aa		5.8	□□□□□ -1.48
PCDH15-231	ENST00000617271	IGFL2	Q6UWQ7	119 aa		5.8	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms