RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 ARRDC1-AS1Q9H2J1 176 aa12.4□□□□□ -0.42
SYNRG-223ENST00000616179 FAM90A27PA6NNH2 459 aa12.39□□□□□ -0.43
SYNRG-223ENST00000616179 HERVK_113P61574 105 aa12.39□□□□□ -0.43
SYNRG-223ENST00000616179 ERCC8Q13216 396 aa12.39□□□□□ -0.43
SYNRG-223ENST00000616179 RIF1Q5UIP0 2472 aaKnown RBP12.39□□□□□ -0.43
SYNRG-223ENST00000616179 FABP5P3A8MUU1 101 aa12.39□□□□□ -0.43
SYNRG-223ENST00000616179 IGHV1-46P01743 117 aa12.39□□□□□ -0.43
SYNRG-223ENST00000616179 SPRY2O43597 315 aa12.39□□□□□ -0.43
SYNRG-223ENST00000616179 FAM27E3Q08E93 113 aa12.39□□□□□ -0.43
SYNRG-223ENST00000616179 LAGE3Q14657 143 aa12.39□□□□□ -0.43
SYNRG-223ENST00000616179 EGR2P11161 476 aaPredicted RBP12.38□□□□□ -0.43
SYNRG-223ENST00000616179 RUSC1-AS1Q66K80 236 aa12.38□□□□□ -0.43
SYNRG-223ENST00000616179 EYSQ5T1H1 3165 aa12.38□□□□□ -0.43
SYNRG-223ENST00000616179 PRRG2O14669 202 aa12.38□□□□□ -0.43
SYNRG-223ENST00000616179 HLA-DMBP28068 263 aa12.38□□□□□ -0.43
SYNRG-223ENST00000616179 DEFB109BQ30KR1 87 aa12.38□□□□□ -0.43
SYNRG-223ENST00000616179 MAPKAPK5-AS1Q8N8E1 139 aa12.38□□□□□ -0.43
SYNRG-223ENST00000616179 THAP8Q8NA92 274 aa12.38□□□□□ -0.43
SYNRG-223ENST00000616179 C7orf69Q9H7B7 122 aa12.38□□□□□ -0.43
SYNRG-223ENST00000616179 C9JAW5 83 aa12.38□□□□□ -0.43
SYNRG-223ENST00000616179 ODF1Q14990 250 aa12.38□□□□□ -0.43
SYNRG-223ENST00000616179 TMEM78Q5T7P6 136 aa12.38□□□□□ -0.43
SYNRG-223ENST00000616179 IGHV3-64A0A075B6Q5 118 aa12.37□□□□□ -0.43
SYNRG-223ENST00000616179 TMEM155Q4W5P6 130 aa12.37□□□□□ -0.43
SYNRG-223ENST00000616179 SMPXQ9UHP9 88 aa12.37□□□□□ -0.43
SYNRG-223ENST00000616179 WISP2O76076 250 aa12.37□□□□□ -0.43
SYNRG-223ENST00000616179 DLX6P56179 175 aa12.37□□□□□ -0.43
SYNRG-223ENST00000616179 GAGE5Q13069 117 aa12.37□□□□□ -0.43
SYNRG-223ENST00000616179 GAGE6Q13070 117 aa12.37□□□□□ -0.43
SYNRG-223ENST00000616179 IGFBPL1Q8WX77 278 aa12.37□□□□□ -0.43
SYNRG-223ENST00000616179 E9PLD3 99 aa12.37□□□□□ -0.43
SYNRG-223ENST00000616179 NTN3O00634 580 aaPredicted RBP12.37□□□□□ -0.43
SYNRG-223ENST00000616179 SLC25A16P16260 332 aa12.37□□□□□ -0.43
SYNRG-223ENST00000616179 SRSF1Q07955 248 aaKnown RBP eCLIP12.37□□□□□ -0.43
SYNRG-223ENST00000616179 PSMG4Q5JS54 123 aa12.36□□□□□ -0.43
SYNRG-223ENST00000616179 PPDPFLQ8WWR9 84 aa12.36□□□□□ -0.43
SYNRG-223ENST00000616179 C1QTNF4Q9BXJ3 329 aa12.36□□□□□ -0.43
SYNRG-223ENST00000616179 COL6A6A6NMZ7 2263 aa12.36□□□□□ -0.43
SYNRG-223ENST00000616179 GAS8-AS1O95177 125 aa12.36□□□□□ -0.43
SYNRG-223ENST00000616179 MFAP4P55083 255 aa12.36□□□□□ -0.43
SYNRG-223ENST00000616179 MSMPQ1L6U9 139 aa12.36□□□□□ -0.43
SYNRG-223ENST00000616179 LYPD2Q6UXB3 125 aa12.35□□□□□ -0.43
SYNRG-223ENST00000616179 ZFP2Q6ZN57 461 aa12.35□□□□□ -0.43
SYNRG-223ENST00000616179 TRANK1O15050 2925 aa12.35□□□□□ -0.43
SYNRG-223ENST00000616179 TRAV17A0A0B4J275 112 aa12.35□□□□□ -0.43
SYNRG-223ENST00000616179 GATA3P23771 443 aa12.35□□□□□ -0.43
SYNRG-223ENST00000616179 SHANK2-AS3Q9BTD1 123 aa12.35□□□□□ -0.43
SYNRG-223ENST00000616179 MYMXA0A1B0GTQ4 84 aa12.34□□□□□ -0.43
SYNRG-223ENST00000616179 DTX2Q86UW9 622 aa12.34□□□□□ -0.43
SYNRG-223ENST00000616179 A0A096LNJ9 63 aa12.34□□□□□ -0.43
SYNRG-223ENST00000616179 CRIP1P50238 77 aa12.34□□□□□ -0.43
SYNRG-223ENST00000616179 Q6ZUT4 128 aa12.34□□□□□ -0.43
SYNRG-223ENST00000616179 KLHL30-AS1Q8NEE0 82 aa12.34□□□□□ -0.43
SYNRG-223ENST00000616179 KIR2DL4Q99706 377 aa12.34□□□□□ -0.43
SYNRG-223ENST00000616179 SIGLEC9Q9Y336 463 aa12.34□□□□□ -0.43
SYNRG-223ENST00000616179 MYCNOSP40205 109 aa12.34□□□□□ -0.43
SYNRG-223ENST00000616179 TCTEX1D4Q5JR98 221 aa12.34□□□□□ -0.43
SYNRG-223ENST00000616179 TMEM262E9PQX1 116 aa12.33□□□□□ -0.43
SYNRG-223ENST00000616179 H7C1H1 209 aa12.33□□□□□ -0.43
SYNRG-223ENST00000616179 HERV-K104P63124 156 aa12.33□□□□□ -0.43
SYNRG-223ENST00000616179 ECSCRQ19T08 205 aa12.33□□□□□ -0.43
SYNRG-223ENST00000616179 ZNF833PQ6ZTB9 187 aa12.33□□□□□ -0.43
SYNRG-223ENST00000616179 PRADC1Q9BSG0 188 aa12.33□□□□□ -0.43
SYNRG-223ENST00000616179 TRAV2A0A0B4J234 112 aa12.33□□□□□ -0.44
SYNRG-223ENST00000616179 FDCSPQ8NFU4 85 aa12.33□□□□□ -0.44
SYNRG-223ENST00000616179 PRR25Q96S07 402 aa12.33□□□□□ -0.44
SYNRG-223ENST00000616179 PLNP26678 52 aa12.33□□□□□ -0.44
SYNRG-223ENST00000616179 LGALS3P17931 250 aaKnown RBP12.32□□□□□ -0.44
SYNRG-223ENST00000616179 RNF182Q8N6D2 247 aa12.32□□□□□ -0.44
SYNRG-223ENST00000616179 PHLDA3Q9Y5J5 127 aa12.32□□□□□ -0.44
SYNRG-223ENST00000616179 NCKAP5O14513 1909 aa12.32□□□□□ -0.44
SYNRG-223ENST00000616179 LYNX1G3V0Z9 82 aa12.32□□□□□ -0.44
SYNRG-223ENST00000616179 LYNX1P0DP58 116 aa12.32□□□□□ -0.44
SYNRG-223ENST00000616179 XGP55808 180 aa12.32□□□□□ -0.44
SYNRG-223ENST00000616179 SPATA25Q9BR10 227 aa12.32□□□□□ -0.44
SYNRG-223ENST00000616179 HIGD1BQ9P298 99 aa12.32□□□□□ -0.44
SYNRG-223ENST00000616179 SIGLEC15Q6ZMC9 328 aa12.32□□□□□ -0.44
SYNRG-223ENST00000616179 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.32□□□□□ -0.443e-6■■■■□ 26.3
SYNRG-223ENST00000616179 RPL13AP40429 203 aaKnown RBP12.31□□□□□ -0.44
SYNRG-223ENST00000616179 ZNF71Q9NQZ8 489 aaPredicted RBP12.31□□□□□ -0.44
SYNRG-223ENST00000616179 ZNF688P0C7X2 276 aa12.31□□□□□ -0.44
SYNRG-223ENST00000616179 KLRD1Q13241 179 aa12.31□□□□□ -0.44
SYNRG-223ENST00000616179 C21orf62Q9NYP8 219 aa12.31□□□□□ -0.44
SYNRG-223ENST00000616179 SPTBN5Q9NRC6 3674 aaKnown RBP12.3□□□□□ -0.44
SYNRG-223ENST00000616179 SLC25A15Q9Y619 301 aa12.3□□□□□ -0.44
SYNRG-223ENST00000616179 GAGE12JA6NER3 117 aa12.3□□□□□ -0.44
SYNRG-223ENST00000616179 GAGE7O76087 117 aa12.3□□□□□ -0.44
SYNRG-223ENST00000616179 GAGE12FP0CL80 117 aa12.3□□□□□ -0.44
SYNRG-223ENST00000616179 GAGE12GP0CL81 117 aa12.3□□□□□ -0.44
SYNRG-223ENST00000616179 GAGE12IP0CL82 117 aa12.3□□□□□ -0.44
SYNRG-223ENST00000616179 GAGE4Q13068 117 aa12.3□□□□□ -0.44
SYNRG-223ENST00000616179 C1orf162Q8NEQ5 155 aaPredicted RBP12.3□□□□□ -0.44
SYNRG-223ENST00000616179 IGKV1-17P01599 117 aa12.29□□□□□ -0.44
SYNRG-223ENST00000616179 Q8N8P6 123 aa12.29□□□□□ -0.44
SYNRG-223ENST00000616179 TMEM30BQ3MIR4 351 aa12.29□□□□□ -0.44
SYNRG-223ENST00000616179 PVRIGQ6DKI7 326 aa12.29□□□□□ -0.44
SYNRG-223ENST00000616179 IGLV2-11P01706 119 aa12.29□□□□□ -0.44
SYNRG-223ENST00000616179 FAM74A4Q5TZK3 123 aa12.29□□□□□ -0.44
SYNRG-223ENST00000616179 MDS2Q8NDY4 140 aa12.29□□□□□ -0.44
SYNRG-223ENST00000616179 TM2D2Q9BX73 214 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms