RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 TMEM14CQ9P0S9 112 aa13.49□□□□□ -0.25
CDX1-202ENST00000616154 A0A1W2PPV4 95 aa13.48□□□□□ -0.25
CDX1-202ENST00000616154 PRSS29PA6NIE9 313 aa13.48□□□□□ -0.25
CDX1-202ENST00000616154 CNN1P51911 297 aaKnown RBP13.48□□□□□ -0.25
CDX1-202ENST00000616154 FAM222AQ5U5X8 452 aa13.48□□□□□ -0.25
CDX1-202ENST00000616154 LCN15Q6UWW0 184 aa13.48□□□□□ -0.25
CDX1-202ENST00000616154 C1orf158Q8N1D5 194 aa13.48□□□□□ -0.25
CDX1-202ENST00000616154 RNF182Q8N6D2 247 aa13.48□□□□□ -0.25
CDX1-202ENST00000616154 ZNF503Q96F45 646 aa13.48□□□□□ -0.25
CDX1-202ENST00000616154 NIPSNAP3BQ9BS92 247 aa13.48□□□□□ -0.25
CDX1-202ENST00000616154 GOLT1BQ9Y3E0 138 aa13.48□□□□□ -0.25
CDX1-202ENST00000616154 TRAV5A0A0B4J249 113 aa13.47□□□□□ -0.25
CDX1-202ENST00000616154 M0R2N4 97 aa13.47□□□□□ -0.25
CDX1-202ENST00000616154 IGLC2P0DOY2 106 aa13.47□□□□□ -0.25
CDX1-202ENST00000616154 TAS2R45P59539 299 aa13.47□□□□□ -0.25
CDX1-202ENST00000616154 IGFL4Q6B9Z1 124 aa13.47□□□□□ -0.25
CDX1-202ENST00000616154 BPIFA4PQ86YQ2 179 aa13.47□□□□□ -0.25
CDX1-202ENST00000616154 FAM213BQ8TBF2 198 aa13.47□□□□□ -0.25
CDX1-202ENST00000616154 SAT2Q96F10 170 aaPredicted RBP13.47□□□□□ -0.25
CDX1-202ENST00000616154 IGF2BP2-AS1Q96M15 143 aa13.47□□□□□ -0.25
CDX1-202ENST00000616154 ZNF331Q9NQX6 463 aaPredicted RBP13.47□□□□□ -0.25
CDX1-202ENST00000616154 TRAV1-1A0A0B4J248 108 aa13.46□□□□□ -0.25
CDX1-202ENST00000616154 PSG3Q16557 428 aa13.46□□□□□ -0.25
CDX1-202ENST00000616154 KHDC3LQ587J8 217 aa13.46□□□□□ -0.25
CDX1-202ENST00000616154 PQLC2Q6ZP29 291 aa13.46□□□□□ -0.25
CDX1-202ENST00000616154 SUN5Q8TC36 379 aa13.46□□□□□ -0.25
CDX1-202ENST00000616154 SLC50A1Q9BRV3 221 aa13.46□□□□□ -0.25
CDX1-202ENST00000616154 NACAE9PAV3 2078 aa13.46□□□□□ -0.26
CDX1-202ENST00000616154 CRXO43186 299 aaPredicted RBP13.45□□□□□ -0.26
CDX1-202ENST00000616154 HBE1P02100 147 aa13.45□□□□□ -0.26
CDX1-202ENST00000616154 UBE2DNLQ8IWF7 75 aa13.45□□□□□ -0.26
CDX1-202ENST00000616154 ZNF738Q8NE65 137 aa13.45□□□□□ -0.26
CDX1-202ENST00000616154 OR8A1Q8NGG7 326 aa13.45□□□□□ -0.26
CDX1-202ENST00000616154 LYPD6BQ8NI32 183 aa13.45□□□□□ -0.26
CDX1-202ENST00000616154 LRRC20Q8TCA0 184 aa13.45□□□□□ -0.26
CDX1-202ENST00000616154 LOC102723971A0A1B0GUV8 181 aa13.44□□□□□ -0.26
CDX1-202ENST00000616154 MAP1LC3B2A6NCE7 125 aa13.44□□□□□ -0.26
CDX1-202ENST00000616154 RGS13O14921 159 aa13.44□□□□□ -0.26
CDX1-202ENST00000616154 MED14OSP0DP75 135 aa13.44□□□□□ -0.26
CDX1-202ENST00000616154 FXYD5Q96DB9 178 aa13.44□□□□□ -0.26
CDX1-202ENST00000616154 MAP1LC3BQ9GZQ8 125 aa13.44□□□□□ -0.26
CDX1-202ENST00000616154 MUC4Q99102 2169 aa13.44□□□□□ -0.26
CDX1-202ENST00000616154 EIF3GO75821 320 aaKnown RBP eCLIP13.43□□□□□ -0.26
CDX1-202ENST00000616154 CXorf1O96002 111 aa13.43□□□□□ -0.26
CDX1-202ENST00000616154 H2AFB1P0C5Y9 115 aa13.43□□□□□ -0.26
CDX1-202ENST00000616154 ARL14EPLP0DKL9 152 aa13.43□□□□□ -0.26
CDX1-202ENST00000616154 RRN3P1Q2M238 152 aa13.43□□□□□ -0.26
CDX1-202ENST00000616154 RNF212Q495C1 297 aa13.43□□□□□ -0.26
CDX1-202ENST00000616154 Q6ZR54 194 aa13.43□□□□□ -0.26
CDX1-202ENST00000616154 OR51M1Q9H341 326 aa13.43□□□□□ -0.26
CDX1-202ENST00000616154 YTHDF2Q9Y5A9 579 aaKnown RBP13.43□□□□□ -0.26
CDX1-202ENST00000616154 H3BQ15 152 aa13.42□□□□□ -0.26
CDX1-202ENST00000616154 HMGB3O15347 200 aaKnown RBP13.42□□□□□ -0.26
CDX1-202ENST00000616154 ZNF253O75346 499 aa13.42□□□□□ -0.26
CDX1-202ENST00000616154 NMBP08949 121 aa13.42□□□□□ -0.26
CDX1-202ENST00000616154 HIST1H1EP10412 219 aaKnown RBP13.42□□□□□ -0.26
CDX1-202ENST00000616154 BLOC1S1P78537 153 aa13.42□□□□□ -0.26
CDX1-202ENST00000616154 GUK1Q16774 197 aa13.42□□□□□ -0.26
CDX1-202ENST00000616154 PAXXQ9BUH6 204 aa13.42□□□□□ -0.26
CDX1-202ENST00000616154 RYR1P21817 5038 aa13.42□□□□□ -0.26
CDX1-202ENST00000616154 SLC17A3O00476 420 aa13.41□□□□□ -0.26
CDX1-202ENST00000616154 OR7C2O60412 319 aa13.41□□□□□ -0.26
CDX1-202ENST00000616154 PYYP10082 97 aa13.41□□□□□ -0.26
CDX1-202ENST00000616154 HTN3P15516 51 aa13.41□□□□□ -0.26
CDX1-202ENST00000616154 GCHFRP30047 84 aa13.41□□□□□ -0.26
CDX1-202ENST00000616154 SPINK13Q1W4C9 94 aa13.41□□□□□ -0.26
CDX1-202ENST00000616154 SFT2D1Q8WV19 159 aa13.41□□□□□ -0.26
CDX1-202ENST00000616154 RPUSD4Q96CM3 377 aaKnown RBP13.41□□□□□ -0.26
CDX1-202ENST00000616154 ZNF586Q9NXT0 402 aa13.41□□□□□ -0.26
CDX1-202ENST00000616154 IGLV2-18A0A075B6J9 118 aa13.4□□□□□ -0.26
CDX1-202ENST00000616154 M0R2Z0 102 aa13.4□□□□□ -0.26
CDX1-202ENST00000616154 INSP01308 110 aa13.4□□□□□ -0.26
CDX1-202ENST00000616154 PDE6HQ13956 83 aa13.4□□□□□ -0.26
CDX1-202ENST00000616154 TRBV19A0A075B6N1 114 aa13.39□□□□□ -0.27
CDX1-202ENST00000616154 NBEAP1P0C6P0 100 aa13.39□□□□□ -0.27
CDX1-202ENST00000616154 TSPOP30536 169 aa13.39□□□□□ -0.27
CDX1-202ENST00000616154 DAD1P61803 113 aa13.39□□□□□ -0.27
CDX1-202ENST00000616154 UBE2L3P68036 154 aaKnown RBP13.39□□□□□ -0.27
CDX1-202ENST00000616154 HIST1H1AQ02539 215 aaPredicted RBP13.39□□□□□ -0.27
CDX1-202ENST00000616154 TMEM88Q6PEY1 159 aa13.39□□□□□ -0.27
CDX1-202ENST00000616154 TMEM208Q9BTX3 173 aa13.39□□□□□ -0.27
CDX1-202ENST00000616154 TMEM167BQ9NRX6 74 aa13.39□□□□□ -0.27
CDX1-202ENST00000616154 NDUFB4O95168 129 aa13.39□□□□□ -0.27
CDX1-202ENST00000616154 OR10J4P0C629 311 aa13.39□□□□□ -0.27
CDX1-202ENST00000616154 FGF8P55075 233 aaPredicted RBP13.39□□□□□ -0.27
CDX1-202ENST00000616154 MRPL53Q96EL3 112 aaKnown RBP13.39□□□□□ -0.27
CDX1-202ENST00000616154 CCL20P78556 96 aa13.38□□□□□ -0.27
CDX1-202ENST00000616154 SOHLH1Q5JUK2 328 aa13.38□□□□□ -0.27
CDX1-202ENST00000616154 CLLU1Q5K131 121 aa13.38□□□□□ -0.27
CDX1-202ENST00000616154 TMEM256Q8N2U0 113 aa13.38□□□□□ -0.27
CDX1-202ENST00000616154 ARL2-SNX15V9GYD0 113 aa13.38□□□□□ -0.27
CDX1-202ENST00000616154 TEX46H3BTG2 121 aa13.37□□□□□ -0.27
CDX1-202ENST00000616154 SNRPCP09234 159 aaKnown RBP13.37□□□□□ -0.27
CDX1-202ENST00000616154 CDKN1BP46527 198 aa13.37□□□□□ -0.27
CDX1-202ENST00000616154 C15orf53Q8NAA6 179 aa13.37□□□□□ -0.27
CDX1-202ENST00000616154 ODF3Q96PU9 254 aa13.37□□□□□ -0.27
CDX1-202ENST00000616154 TMPRSS5Q9H3S3 457 aa13.37□□□□□ -0.27
CDX1-202ENST00000616154 LYRM9A8MSI8 78 aa13.36□□□□□ -0.27
CDX1-202ENST00000616154 PRAC2D3DTV9 90 aa13.36□□□□□ -0.27
CDX1-202ENST00000616154 H3BTX0 84 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms