RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 DPH3Q96FX2 82 aa15.1■□□□□ 0.01
SPAST-203ENST00000615843 C15orf65H3BRN8 121 aa15.1■□□□□ 0.01
SPAST-203ENST00000615843 MORN5Q5VZ52 161 aa15.1■□□□□ 0.01
SPAST-203ENST00000615843 NDUFB8O95169 186 aa15.09■□□□□ 0.01
SPAST-203ENST00000615843 RHPN1-AS1Q9BWJ2 59 aa15.09■□□□□ 0.01
SPAST-203ENST00000615843 INTS1Q8N201 2190 aaKnown RBP15.09■□□□□ 0.01
SPAST-203ENST00000615843 LTAP01374 205 aa15.09■□□□□ 0.01
SPAST-203ENST00000615843 PCP2Q8IVA1 136 aa15.09■□□□□ 0.01
SPAST-203ENST00000615843 WDR90Q96KV7 1748 aa15.08■□□□□ 0.01
SPAST-203ENST00000615843 TEX48A0A1B0GUV7 120 aa15.08■□□□□ 0.01
SPAST-203ENST00000615843 Q6ZR03 302 aa15.08■□□□□ 0.01
SPAST-203ENST00000615843 DTX2Q86UW9 622 aa15.08■□□□□ 0.01
SPAST-203ENST00000615843 H3BRN7 92 aa15.08■□□□□ 0
SPAST-203ENST00000615843 SAP30O75446 220 aa15.08■□□□□ 0
SPAST-203ENST00000615843 EFNA4P52798 201 aa15.08■□□□□ 0
SPAST-203ENST00000615843 GAGE12JA6NER3 117 aa15.08■□□□□ 0
SPAST-203ENST00000615843 GAGE7O76087 117 aa15.08■□□□□ 0
SPAST-203ENST00000615843 GAGE12FP0CL80 117 aa15.08■□□□□ 0
SPAST-203ENST00000615843 GAGE12GP0CL81 117 aa15.08■□□□□ 0
SPAST-203ENST00000615843 GAGE12IP0CL82 117 aa15.08■□□□□ 0
SPAST-203ENST00000615843 GAGE4Q13068 117 aa15.08■□□□□ 0
SPAST-203ENST00000615843 MBD3L4A6NDZ8 208 aaPredicted RBP15.08■□□□□ 0
SPAST-203ENST00000615843 MBD3L3A6NE82 208 aaPredicted RBP15.08■□□□□ 0
SPAST-203ENST00000615843 MBD3L5A6NJ08 208 aaPredicted RBP15.08■□□□□ 0
SPAST-203ENST00000615843 MBD3L2Q8NHZ7 208 aaPredicted RBP15.08■□□□□ 0
SPAST-203ENST00000615843 SMIM2Q9BVW6 85 aa15.08■□□□□ 0
SPAST-203ENST00000615843 DOPEY2Q9Y3R5 2298 aa15.07■□□□□ 0
SPAST-203ENST00000615843 TRIOBPQ9H2D6 2365 aa15.07■□□□□ 0
SPAST-203ENST00000615843 TRGV1A0A0A0MS02 117 aa15.07■□□□□ 0
SPAST-203ENST00000615843 ZNF134P52741 427 aa15.07■□□□□ 0
SPAST-203ENST00000615843 THAP8Q8NA92 274 aa15.07■□□□□ 0
SPAST-203ENST00000615843 C6orf226Q5I0X4 101 aa15.07■□□□□ 0
SPAST-203ENST00000615843 CNOT1A5YKK6 2376 aaKnown RBP15.07■□□□□ 0
SPAST-203ENST00000615843 ZNF503-AS2A6NEH8 195 aa15.06■□□□□ 0
SPAST-203ENST00000615843 FAM223BA6NKX1 122 aa15.06■□□□□ 0
SPAST-203ENST00000615843 VWC2LB2RUY7 222 aa15.06■□□□□ 0
SPAST-203ENST00000615843 FAM223AQ8IWN6 122 aa15.06■□□□□ 0
SPAST-203ENST00000615843 SPANXDQ9BXN6 97 aa15.06■□□□□ 0
SPAST-203ENST00000615843 IGHG3P01860 377 aa15.06■□□□□ 0
SPAST-203ENST00000615843 A0A087WX48 190 aa15.06■□□□□ 0
SPAST-203ENST00000615843 USMG5Q96IX5 58 aa15.06■□□□□ 0
SPAST-203ENST00000615843 HLA-DMBP28068 263 aa15.05■□□□□ 0
SPAST-203ENST00000615843 SDHAF1A6NFY7 115 aa15.05■□□□□ -0
SPAST-203ENST00000615843 FAM120AOSQ5T036 256 aa15.05■□□□□ -0
SPAST-203ENST00000615843 PROK2Q9HC23 129 aa15.05■□□□□ -0
SPAST-203ENST00000615843 PLXNA4Q9HCM2 1894 aa15.05■□□□□ -0
SPAST-203ENST00000615843 SOCS3O14543 225 aa15.05■□□□□ -0
SPAST-203ENST00000615843 DKK1O94907 266 aa15.05■□□□□ -0
SPAST-203ENST00000615843 RLFQ13129 1914 aa15.05■□□□□ -0
SPAST-203ENST00000615843 IGHV3-53P01767 116 aa15.04■□□□□ -0
SPAST-203ENST00000615843 Q8NFD4 153 aa15.04■□□□□ -0
SPAST-203ENST00000615843 DOCK8Q8NF50 2099 aa15.04■□□□□ -0
SPAST-203ENST00000615843 UTF1Q5T230 341 aa15.04■□□□□ -0
SPAST-203ENST00000615843 B5MCH6 92 aa15.04■□□□□ -0
SPAST-203ENST00000615843 K7EM74 188 aa15.04■□□□□ -0
SPAST-203ENST00000615843 DUX4L9Q6RFH8 374 aaPredicted RBP15.04■□□□□ -0
SPAST-203ENST00000615843 DOCK10Q96BY6 2186 aa15.04■□□□□ -0
SPAST-203ENST00000615843 GAGE5Q13069 117 aa15.04■□□□□ -0
SPAST-203ENST00000615843 GAGE6Q13070 117 aa15.04■□□□□ -0
SPAST-203ENST00000615843 SH2D6Q7Z4S9 175 aa15.04■□□□□ -0
SPAST-203ENST00000615843 NTN5Q8WTR8 489 aaPredicted RBP15.03■□□□□ -0
SPAST-203ENST00000615843 TPSG1Q9NRR2 321 aa15.03■□□□□ -0
SPAST-203ENST00000615843 LINC00173Q6ZV60 143 aa15.03■□□□□ -0
SPAST-203ENST00000615843 CARD19Q96LW7 228 aa15.03■□□□□ -0
SPAST-203ENST00000615843 SCRT2Q9NQ03 307 aa15.03■□□□□ -0
SPAST-203ENST00000615843 GATA4P43694 442 aa15.03■□□□□ -0
SPAST-203ENST00000615843 C15orf53Q8NAA6 179 aa15.03■□□□□ -0
SPAST-203ENST00000615843 CD59P13987 128 aa15.02■□□□□ -0
SPAST-203ENST00000615843 COL8A2P25067 703 aa15.02■□□□□ -0
SPAST-203ENST00000615843 SS18L2Q9UHA2 77 aa15.02■□□□□ -0
SPAST-203ENST00000615843 MYO7BQ6PIF6 2116 aa15.02■□□□□ -0
SPAST-203ENST00000615843 IGLC1P0CG04 106 aa15.02■□□□□ -0
SPAST-203ENST00000615843 POU2AF1Q16633 256 aa15.02■□□□□ -0
SPAST-203ENST00000615843 DAZ1Q9NQZ3 744 aaKnown RBP15.02■□□□□ -0
SPAST-203ENST00000615843 I3L3M4 83 aa15.02□□□□□ -0.01
SPAST-203ENST00000615843 J3QQQ9 107 aa15.02□□□□□ -0.01
SPAST-203ENST00000615843 LYPD6Q86Y78 171 aa15.02□□□□□ -0.01
SPAST-203ENST00000615843 NDUFA12Q9UI09 145 aa15.02□□□□□ -0.01
SPAST-203ENST00000615843 PKDREJQ9NTG1 2253 aa15.02□□□□□ -0.01
SPAST-203ENST00000615843 PLXND1Q9Y4D7 1925 aa15.01□□□□□ -0.01
SPAST-203ENST00000615843 FAM110DQ8TAY7 271 aaPredicted RBP15.01□□□□□ -0.01
SPAST-203ENST00000615843 H3BUX3 64 aa15.01□□□□□ -0.01
SPAST-203ENST00000615843 OVOL3O00110 214 aa15.01□□□□□ -0.01
SPAST-203ENST00000615843 YLPM1P49750 1951 aaKnown RBP15.01□□□□□ -0.01
SPAST-203ENST00000615843 C3orf36Q3SXR2 165 aa15.01□□□□□ -0.01
SPAST-203ENST00000615843 ANKRD39Q53RE8 183 aa15.01□□□□□ -0.01
SPAST-203ENST00000615843 LINC01545Q5VT33 79 aa15.01□□□□□ -0.01
SPAST-203ENST00000615843 A0A0G2JNJ9 132 aa15.01□□□□□ -0.01
SPAST-203ENST00000615843 IGLL5B9A064 214 aa15.01□□□□□ -0.01
SPAST-203ENST00000615843 Q8TCH9 128 aa15.01□□□□□ -0.01
SPAST-203ENST00000615843 Q9UFV3 132 aa15.01□□□□□ -0.01
SPAST-203ENST00000615843 SSC4DQ8WTU2 575 aa15□□□□□ -0.01
SPAST-203ENST00000615843 TRBV25-1A0A075B6N4 114 aa15□□□□□ -0.01
SPAST-203ENST00000615843 TAX1BP3O14907 124 aa15□□□□□ -0.01
SPAST-203ENST00000615843 C8orf86Q6ZUL3 223 aa15□□□□□ -0.01
SPAST-203ENST00000615843 BRD3OSQ6XYD6 125 aa15□□□□□ -0.01
SPAST-203ENST00000615843 ANXA2RQ3ZCQ2 193 aa15□□□□□ -0.01
SPAST-203ENST00000615843 LINC00311Q8N616 119 aa14.99□□□□□ -0.01
SPAST-203ENST00000615843 CADP27708 2225 aa14.99□□□□□ -0.01
SPAST-203ENST00000615843 TRACP01848 142 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms