RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 PHLDA2Q53GA4 152 aa6.96□□□□□ -1.29
VPS11-206ENST00000614944 LINC01545Q5VT33 79 aa6.96□□□□□ -1.29
VPS11-206ENST00000614944 DUSP14O95147 198 aaKnown RBP6.96□□□□□ -1.3
VPS11-206ENST00000614944 IGLV1-47P01700 117 aa6.96□□□□□ -1.3
VPS11-206ENST00000614944 ZNF134P52741 427 aa6.96□□□□□ -1.3
VPS11-206ENST00000614944 TIRAPP58753 221 aa6.96□□□□□ -1.3
VPS11-206ENST00000614944 ZNF816Q0VGE8 651 aaPredicted RBP6.96□□□□□ -1.3
VPS11-206ENST00000614944 CACNA1DQ01668 2161 aa6.96□□□□□ -1.3
VPS11-206ENST00000614944 TRBV20OR9-2A0A075B6H5 130 aa6.95□□□□□ -1.3
VPS11-206ENST00000614944 ODF3BA8MYP8 253 aa6.95□□□□□ -1.3
VPS11-206ENST00000614944 LYNX1G3V0Z9 82 aa6.95□□□□□ -1.3
VPS11-206ENST00000614944 LY6LH3BQJ8 138 aa6.95□□□□□ -1.3
VPS11-206ENST00000614944 LYNX1P0DP58 116 aa6.95□□□□□ -1.3
VPS11-206ENST00000614944 C6orf226Q5I0X4 101 aa6.95□□□□□ -1.3
VPS11-206ENST00000614944 FGFRL1Q8N441 504 aa6.95□□□□□ -1.3
VPS11-206ENST00000614944 FAM168AQ92567 244 aa6.95□□□□□ -1.3
VPS11-206ENST00000614944 RNF5Q99942 180 aa6.95□□□□□ -1.3
VPS11-206ENST00000614944 NBEAQ8NFP9 2946 aa6.95□□□□□ -1.3
VPS11-206ENST00000614944 IGHV1-24A0A0C4DH33 117 aa6.95□□□□□ -1.3
VPS11-206ENST00000614944 SH2D7A6NKC9 451 aaPredicted RBP6.95□□□□□ -1.3
VPS11-206ENST00000614944 PROP1O75360 226 aa6.95□□□□□ -1.3
VPS11-206ENST00000614944 S1PR3Q99500 378 aa6.95□□□□□ -1.3
VPS11-206ENST00000614944 TPRP12270 2363 aaKnown RBP6.95□□□□□ -1.3
VPS11-206ENST00000614944 SMCPP49901 116 aaPredicted RBP6.95□□□□□ -1.3
VPS11-206ENST00000614944 Q6ZQT7 251 aa6.95□□□□□ -1.3
VPS11-206ENST00000614944 CHCHD1Q96BP2 118 aaKnown RBP6.95□□□□□ -1.3
VPS11-206ENST00000614944 CHCHD5Q9BSY4 110 aa6.95□□□□□ -1.3
VPS11-206ENST00000614944 V9GYV3 84 aa6.95□□□□□ -1.3
VPS11-206ENST00000614944 DOPEY1Q5JWR5 2465 aa6.95□□□□□ -1.3
VPS11-206ENST00000614944 IGKV1D-33P01593 117 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 IGKV1-33P01594 117 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 BRWD1-AS2P59051 145 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 MINOS1Q5TGZ0 78 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 Q8N7P7 452 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 MINOS1-NBL1R4GNA1 71 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 A0A096LNT2 108 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 FAM236AA0A1B0GUQ0 79 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 FAM236BA0A1B0GV22 79 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 ZNF785A8K8V0 405 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 SAA2P0DJI9 122 aaPredicted RBP6.94□□□□□ -1.3
VPS11-206ENST00000614944 ATP5G3P48201 142 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 ID3Q02535 119 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 PDPNQ86YL7 162 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 RFESDQ8TAC1 157 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 PCNX1Q96RV3 2341 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 ZNF561-AS1K7EIQ3 104 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 IGKV1-39P01597 117 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 IGKV1D-39P04432 117 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 C3orf22Q8N5N4 141 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 TMEM86BQ8N661 226 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 ZNF525Q8N782 197 aa6.94□□□□□ -1.3
VPS11-206ENST00000614944 F11RQ9Y624 299 aaKnown RBP6.94□□□□□ -1.3
VPS11-206ENST00000614944 H3BP45 60 aa6.93□□□□□ -1.3
VPS11-206ENST00000614944 CCL3L1P16619 93 aa6.93□□□□□ -1.3
VPS11-206ENST00000614944 RPL30P62888 115 aaKnown RBP6.93□□□□□ -1.3
VPS11-206ENST00000614944 HBG1P69891 147 aa6.93□□□□□ -1.3
VPS11-206ENST00000614944 HBG2P69892 147 aa6.93□□□□□ -1.3
VPS11-206ENST00000614944 LOXL1Q08397 574 aaPredicted RBP6.93□□□□□ -1.3
VPS11-206ENST00000614944 NUP35Q8NFH5 326 aa6.93□□□□□ -1.3
VPS11-206ENST00000614944 PAX8Q06710 450 aa6.93□□□□□ -1.3
VPS11-206ENST00000614944 DEFB113Q30KQ7 82 aa6.93□□□□□ -1.3
VPS11-206ENST00000614944 ABHD12Q8N2K0 398 aa6.93□□□□□ -1.3
VPS11-206ENST00000614944 TAF15Q92804 592 aaKnown RBP eCLIP6.93□□□□□ -1.3
VPS11-206ENST00000614944 DLX4Q92988 240 aaPredicted RBP6.93□□□□□ -1.3
VPS11-206ENST00000614944 TXNDC17Q9BRA2 123 aa6.93□□□□□ -1.3
VPS11-206ENST00000614944 BPESC1Q9GZL8 116 aa6.93□□□□□ -1.3
VPS11-206ENST00000614944 JPT2Q9H910 190 aa6.93□□□□□ -1.3
VPS11-206ENST00000614944 KLK5Q9Y337 293 aaPredicted RBP6.93□□□□□ -1.3
VPS11-206ENST00000614944 TIMM9Q9Y5J7 89 aa6.93□□□□□ -1.3
VPS11-206ENST00000614944 SPTA1P02549 2419 aa6.93□□□□□ -1.3
VPS11-206ENST00000614944 IGHV3-43A0A0B4J1X8 118 aa6.92□□□□□ -1.3
VPS11-206ENST00000614944 LINC00473A8K010 186 aa6.92□□□□□ -1.3
VPS11-206ENST00000614944 INS-IGF2F8WCM5 200 aa6.92□□□□□ -1.3
VPS11-206ENST00000614944 IGHV3-43DP0DP04 118 aa6.92□□□□□ -1.3
VPS11-206ENST00000614944 HCP5Q6MZN7 132 aa6.92□□□□□ -1.3
VPS11-206ENST00000614944 BUB1B-PAK6H3BSN5 160 aa6.92□□□□□ -1.3
VPS11-206ENST00000614944 NDUFS7O75251 213 aa6.92□□□□□ -1.3
VPS11-206ENST00000614944 IGKV1-5P01602 117 aa6.92□□□□□ -1.3
VPS11-206ENST00000614944 HSPE1P61604 102 aaKnown RBP6.92□□□□□ -1.3
VPS11-206ENST00000614944 PMVKQ15126 192 aa6.92□□□□□ -1.3
VPS11-206ENST00000614944 RRN3P1Q2M238 152 aa6.92□□□□□ -1.3
VPS11-206ENST00000614944 LY96Q9Y6Y9 160 aa6.92□□□□□ -1.3
VPS11-206ENST00000614944 CACNA1BQ00975 2339 aa6.92□□□□□ -1.3
VPS11-206ENST00000614944 DIDO1Q9BTC0 2240 aaKnown RBP6.92□□□□□ -1.3
VPS11-206ENST00000614944 CFAP46Q8IYW2 2715 aa6.92□□□□□ -1.3
VPS11-206ENST00000614944 UQCRQO14949 82 aa6.92□□□□□ -1.3
VPS11-206ENST00000614944 ACTL6BO94805 426 aa6.92□□□□□ -1.3
VPS11-206ENST00000614944 CNTFRP26992 372 aa6.92□□□□□ -1.3
VPS11-206ENST00000614944 C1orf195Q5TG92 126 aa6.92□□□□□ -1.3
VPS11-206ENST00000614944 Q5XG85 94 aa6.92□□□□□ -1.3
VPS11-206ENST00000614944 NABP2Q9BQ15 211 aa6.92□□□□□ -1.3
VPS11-206ENST00000614944 PRRC2CQ9Y520 2896 aaKnown RBP6.92□□□□□ -1.3
VPS11-206ENST00000614944 LY6HO94772 140 aa6.91□□□□□ -1.3
VPS11-206ENST00000614944 URB1-AS1Q96HZ7 61 aa6.91□□□□□ -1.3
VPS11-206ENST00000614944 ICE1Q9Y2F5 2266 aa6.91□□□□□ -1.3
VPS11-206ENST00000614944 TRAV8-2A0A0B4J237 113 aa6.91□□□□□ -1.3
VPS11-206ENST00000614944 M0R2P5 195 aa6.91□□□□□ -1.3
VPS11-206ENST00000614944 ZFP36P26651 326 aaKnown RBP6.91□□□□□ -1.3
VPS11-206ENST00000614944 UBE2E1P51965 193 aa6.91□□□□□ -1.3
VPS11-206ENST00000614944 GAGE2AQ6NT46 116 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms