RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 GPR179Q6PRD1 2367 aa11.72□□□□□ -0.53
SNPH-203ENST00000614659 MPDZO75970 2070 aa11.72□□□□□ -0.53
SNPH-203ENST00000614659 TMEM158Q8WZ71 300 aa11.72□□□□□ -0.53
SNPH-203ENST00000614659 SRRM4A7MD48 611 aaKnown RBP11.72□□□□□ -0.53
SNPH-203ENST00000614659 MALP21145 153 aa11.72□□□□□ -0.53
SNPH-203ENST00000614659 ZC2HC1BQ5TFG8 222 aa11.72□□□□□ -0.53
SNPH-203ENST00000614659 Q8N8P6 123 aa11.72□□□□□ -0.53
SNPH-203ENST00000614659 TSSC4Q9Y5U2 329 aaPredicted RBP11.72□□□□□ -0.53
SNPH-203ENST00000614659 DUX4L9Q6RFH8 374 aaPredicted RBP11.72□□□□□ -0.53
SNPH-203ENST00000614659 INTS1Q8N201 2190 aaKnown RBP11.72□□□□□ -0.53
SNPH-203ENST00000614659 ESPL1Q14674 2120 aa11.72□□□□□ -0.53
SNPH-203ENST00000614659 LTAP01374 205 aa11.72□□□□□ -0.53
SNPH-203ENST00000614659 IGLC1P0CG04 106 aa11.71□□□□□ -0.53
SNPH-203ENST00000614659 NPSP0C0P6 89 aa11.71□□□□□ -0.53
SNPH-203ENST00000614659 RCHY1Q96PM5 261 aa11.71□□□□□ -0.53
SNPH-203ENST00000614659 ZMAT4Q9H898 229 aa11.71□□□□□ -0.53
SNPH-203ENST00000614659 ATP6V0E1O15342 81 aa11.71□□□□□ -0.54
SNPH-203ENST00000614659 TMEM86BQ8N661 226 aa11.71□□□□□ -0.54
SNPH-203ENST00000614659 KLF5Q13887 457 aaPredicted RBP11.71□□□□□ -0.54
SNPH-203ENST00000614659 C2orf16Q68DN1 1984 aa11.71□□□□□ -0.54
SNPH-203ENST00000614659 IGLC2P0DOY2 106 aa11.7□□□□□ -0.54
SNPH-203ENST00000614659 IGLC3P0DOY3 106 aa11.7□□□□□ -0.54
SNPH-203ENST00000614659 SYNJ2BPP57105 145 aa11.7□□□□□ -0.54
SNPH-203ENST00000614659 C9orf118A6NHY6 69 aa11.7□□□□□ -0.54
SNPH-203ENST00000614659 NDUFA4O00483 81 aa11.7□□□□□ -0.54
SNPH-203ENST00000614659 C10orf105Q8TEF2 133 aa11.7□□□□□ -0.54
SNPH-203ENST00000614659 PHLDA1Q8WV24 401 aaPredicted RBP11.7□□□□□ -0.54
SNPH-203ENST00000614659 OVOL2Q9BRP0 275 aa11.7□□□□□ -0.54
SNPH-203ENST00000614659 RPL35AP18077 110 aaKnown RBP11.7□□□□□ -0.54
SNPH-203ENST00000614659 S100A7L2Q5SY68 101 aa11.7□□□□□ -0.54
SNPH-203ENST00000614659 Q6ZWC4 215 aa11.7□□□□□ -0.54
SNPH-203ENST00000614659 MRPL53Q96EL3 112 aaKnown RBP11.69□□□□□ -0.54
SNPH-203ENST00000614659 TMEM141Q96I45 108 aa11.69□□□□□ -0.54
SNPH-203ENST00000614659 CSTL1Q9H114 145 aa11.69□□□□□ -0.54
SNPH-203ENST00000614659 INS-IGF2F8WCM5 200 aa11.69□□□□□ -0.54
SNPH-203ENST00000614659 TEX43Q6ZNM6 134 aa11.69□□□□□ -0.54
SNPH-203ENST00000614659 PRR25Q96S07 402 aa11.69□□□□□ -0.54
SNPH-203ENST00000614659 ZNF688P0C7X2 276 aa11.69□□□□□ -0.54
SNPH-203ENST00000614659 SPTBN2O15020 2390 aa11.69□□□□□ -0.54
SNPH-203ENST00000614659 LGALS9BQ3B8N2 356 aa11.69□□□□□ -0.54
SNPH-203ENST00000614659 LGALS9CQ6DKI2 356 aa11.69□□□□□ -0.54
SNPH-203ENST00000614659 OVOL3O00110 214 aa11.68□□□□□ -0.54
SNPH-203ENST00000614659 RPL36AP83881 106 aaKnown RBP11.68□□□□□ -0.54
SNPH-203ENST00000614659 RPL36ALQ969Q0 106 aaKnown RBP11.68□□□□□ -0.54
SNPH-203ENST00000614659 NDPQ00604 133 aa11.68□□□□□ -0.54
SNPH-203ENST00000614659 IL17RELQ6ZVW7 336 aa11.68□□□□□ -0.54
SNPH-203ENST00000614659 ADARB2-AS1A8MUL3 147 aa11.68□□□□□ -0.54
SNPH-203ENST00000614659 HIST1H4AP62805 103 aaKnown RBP11.68□□□□□ -0.54
SNPH-203ENST00000614659 TRPT1Q86TN4 253 aaKnown RBP11.68□□□□□ -0.54
SNPH-203ENST00000614659 LINC00158P58513 81 aa11.68□□□□□ -0.54
SNPH-203ENST00000614659 C11orf1Q9H5F2 150 aa11.68□□□□□ -0.54
SNPH-203ENST00000614659 A0A0U1RRA0 63 aa11.68□□□□□ -0.54
SNPH-203ENST00000614659 NPC2P61916 151 aa11.68□□□□□ -0.54
SNPH-203ENST00000614659 ERCC8Q13216 396 aa11.68□□□□□ -0.54
SNPH-203ENST00000614659 SLAQ13239 276 aa11.68□□□□□ -0.54
SNPH-203ENST00000614659 C8orf49Q96NF6 230 aa11.68□□□□□ -0.54
SNPH-203ENST00000614659 KLF12Q9Y4X4 402 aa11.68□□□□□ -0.54
SNPH-203ENST00000614659 IGLC7A0M8Q6 106 aa11.67□□□□□ -0.54
SNPH-203ENST00000614659 RBAKDNA6NC62 111 aa11.67□□□□□ -0.54
SNPH-203ENST00000614659 ZNF48Q96MX3 618 aaPredicted RBP11.67□□□□□ -0.54
SNPH-203ENST00000614659 EDA2RQ9HAV5 297 aa11.67□□□□□ -0.54
SNPH-203ENST00000614659 A0A087WX48 190 aa11.67□□□□□ -0.54
SNPH-203ENST00000614659 K7EN84 100 aa11.67□□□□□ -0.54
SNPH-203ENST00000614659 SRSF2Q01130 221 aaKnown RBP11.67□□□□□ -0.54
SNPH-203ENST00000614659 SNRNP200O75643 2136 aaKnown RBP11.67□□□□□ -0.54
SNPH-203ENST00000614659 STPG4Q8N801 248 aa11.67□□□□□ -0.54
SNPH-203ENST00000614659 RASL10AQ92737 203 aa11.67□□□□□ -0.54
SNPH-203ENST00000614659 TMEM131Q92545 1883 aa11.67□□□□□ -0.54
SNPH-203ENST00000614659 PRB4P10163 310 aaPredicted RBP11.66□□□□□ -0.54
SNPH-203ENST00000614659 Q71RC1 249 aaPredicted RBP11.66□□□□□ -0.54
SNPH-203ENST00000614659 ICE1Q9Y2F5 2266 aa11.66□□□□□ -0.54
SNPH-203ENST00000614659 C9JAW5 83 aa11.66□□□□□ -0.54
SNPH-203ENST00000614659 K7EP34 96 aa11.66□□□□□ -0.54
SNPH-203ENST00000614659 C14orf178Q8N769 122 aaPredicted RBP11.66□□□□□ -0.54
SNPH-203ENST00000614659 OR11H6Q8NGC7 330 aa11.66□□□□□ -0.54
SNPH-203ENST00000614659 TPSG1Q9NRR2 321 aa11.66□□□□□ -0.54
SNPH-203ENST00000614659 IGHV1-24A0A0C4DH33 117 aa11.66□□□□□ -0.54
SNPH-203ENST00000614659 FCN3O75636 299 aa11.66□□□□□ -0.54
SNPH-203ENST00000614659 GATD1Q8NB37 220 aa11.66□□□□□ -0.54
SNPH-203ENST00000614659 PLA2G2EQ9NZK7 142 aa11.66□□□□□ -0.54
SNPH-203ENST00000614659 CEP250Q9BV73 2442 aa11.66□□□□□ -0.54
SNPH-203ENST00000614659 SMKR1H3BMG3 65 aa11.66□□□□□ -0.54
SNPH-203ENST00000614659 ZNF876PQ49A33 203 aa11.66□□□□□ -0.54
SNPH-203ENST00000614659 CHCHD5Q9BSY4 110 aa11.66□□□□□ -0.54
SNPH-203ENST00000614659 MUC22E2RYF6 1773 aaPredicted RBP11.65□□□□□ -0.54
SNPH-203ENST00000614659 TMEM213A2RRL7 107 aa11.65□□□□□ -0.54
SNPH-203ENST00000614659 HOXB4P17483 251 aaPredicted RBP11.65□□□□□ -0.54
SNPH-203ENST00000614659 MRPL51Q4U2R6 128 aaKnown RBP11.65□□□□□ -0.54
SNPH-203ENST00000614659 CACNA1HO95180 2353 aa11.65□□□□□ -0.54
SNPH-203ENST00000614659 C9orf66Q5T8R8 295 aa11.65□□□□□ -0.54
SNPH-203ENST00000614659 BOD1L2Q8IYS8 172 aa11.65□□□□□ -0.54
SNPH-203ENST00000614659 RHODO00212 210 aa11.65□□□□□ -0.54
SNPH-203ENST00000614659 GRNP28799 593 aaKnown RBP11.65□□□□□ -0.54
SNPH-203ENST00000614659 C8orf86Q6ZUL3 223 aa11.65□□□□□ -0.54
SNPH-203ENST00000614659 MYO7BQ6PIF6 2116 aa11.65□□□□□ -0.55
SNPH-203ENST00000614659 F8W1H4 67 aa11.64□□□□□ -0.55
SNPH-203ENST00000614659 NPBQ8NG41 125 aa11.64□□□□□ -0.55
SNPH-203ENST00000614659 TRGV1A0A0A0MS02 117 aa11.64□□□□□ -0.55
SNPH-203ENST00000614659 TRAV8-3A0A0A6YYJ7 113 aa11.64□□□□□ -0.55
SNPH-203ENST00000614659 A0A1W2PNU3 283 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms