RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 MRAPQ8TCY5 172 aa6.93□□□□□ -1.3
PDE6A-204ENST00000613228 CGB1A6NKQ9 187 aa6.93□□□□□ -1.3
PDE6A-204ENST00000613228 M0QXV9 152 aa6.93□□□□□ -1.3
PDE6A-204ENST00000613228 CD24P25063 80 aa6.93□□□□□ -1.3
PDE6A-204ENST00000613228 LINC00205P59089 165 aa6.93□□□□□ -1.3
PDE6A-204ENST00000613228 PRR20EP86478 221 aa6.93□□□□□ -1.3
PDE6A-204ENST00000613228 PRR20CP86479 221 aa6.93□□□□□ -1.3
PDE6A-204ENST00000613228 PRR20DP86480 221 aa6.93□□□□□ -1.3
PDE6A-204ENST00000613228 PRR20BP86481 221 aa6.93□□□□□ -1.3
PDE6A-204ENST00000613228 PRR20AP86496 221 aa6.93□□□□□ -1.3
PDE6A-204ENST00000613228 ASXL3Q9C0F0 2248 aa6.93□□□□□ -1.3
PDE6A-204ENST00000613228 SPANXB1Q9NS25 103 aaPredicted RBP6.93□□□□□ -1.3
PDE6A-204ENST00000613228 SLC25A20O43772 301 aa6.93□□□□□ -1.3
PDE6A-204ENST00000613228 SRSF1Q07955 248 aaKnown RBP eCLIP6.93□□□□□ -1.3
PDE6A-204ENST00000613228 UTF1Q5T230 341 aa6.93□□□□□ -1.3
PDE6A-204ENST00000613228 Q86TA4 180 aa6.93□□□□□ -1.3
PDE6A-204ENST00000613228 C11orf1Q9H5F2 150 aa6.93□□□□□ -1.3
PDE6A-204ENST00000613228 ZNF138P52744 262 aa6.92□□□□□ -1.3
PDE6A-204ENST00000613228 ITLN2Q8WWU7 325 aaPredicted RBP6.92□□□□□ -1.3
PDE6A-204ENST00000613228 MCRIP2Q9BUT9 160 aaKnown RBP6.92□□□□□ -1.3
PDE6A-204ENST00000613228 NDUFA4O00483 81 aa6.92□□□□□ -1.3
PDE6A-204ENST00000613228 ATP5G1P05496 136 aa6.92□□□□□ -1.3
PDE6A-204ENST00000613228 ACYP1P07311 99 aa6.92□□□□□ -1.3
PDE6A-204ENST00000613228 LGALS1P09382 135 aaKnown RBP6.92□□□□□ -1.3
PDE6A-204ENST00000613228 NEGR1Q7Z3B1 354 aa6.92□□□□□ -1.3
PDE6A-204ENST00000613228 ASCC3Q8N3C0 2202 aaKnown RBP6.92□□□□□ -1.3
PDE6A-204ENST00000613228 IGLV2-14P01704 120 aa6.92□□□□□ -1.3
PDE6A-204ENST00000613228 IGHG4P01861 327 aa6.92□□□□□ -1.3
PDE6A-204ENST00000613228 PRB3Q04118 309 aaPredicted RBP6.92□□□□□ -1.3
PDE6A-204ENST00000613228 LSM4Q9Y4Z0 139 aaKnown RBP6.92□□□□□ -1.3
PDE6A-204ENST00000613228 PMS2P5A8MQ11 134 aa6.92□□□□□ -1.3
PDE6A-204ENST00000613228 A4D1N5 150 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 ATP6V0E1O15342 81 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 RNASE4P34096 147 aaKnown RBP6.91□□□□□ -1.3
PDE6A-204ENST00000613228 WT1-ASQ06250 92 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 SPRNQ5BIV9 151 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 ZC2HC1BQ5TFG8 222 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 AMTNQ6UX39 209 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 LRRC75A-AS1Q8N1F1 130 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 MRPL53Q96EL3 112 aaKnown RBP6.91□□□□□ -1.3
PDE6A-204ENST00000613228 PRADC1Q9BSG0 188 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 DAZ1Q9NQZ3 744 aaKnown RBP6.91□□□□□ -1.3
PDE6A-204ENST00000613228 IGHV3-66A0A0C4DH42 116 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 HIGD1BQ9P298 99 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 IGHV3-11P01762 117 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 ORMDL2Q53FV1 153 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 TRBV19A0A075B6N1 114 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 NPYP01303 97 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 KLK15Q9H2R5 256 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 CACNA1EQ15878 2313 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 J3QKU1 62 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 MT-ATP8P03928 68 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 P0C879 139 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 CNTFRP26992 372 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 ANKRD29Q8N6D5 301 aa6.91□□□□□ -1.3
PDE6A-204ENST00000613228 SRRM4A7MD48 611 aaKnown RBP6.9□□□□□ -1.3
PDE6A-204ENST00000613228 D6R8Y8 96 aa6.9□□□□□ -1.3
PDE6A-204ENST00000613228 PPIFP30405 207 aaKnown RBP6.9□□□□□ -1.3
PDE6A-204ENST00000613228 TMEM258P61165 79 aa6.9□□□□□ -1.3
PDE6A-204ENST00000613228 MRPL23Q16540 153 aaKnown RBP6.9□□□□□ -1.3
PDE6A-204ENST00000613228 LINC01545Q5VT33 79 aa6.9□□□□□ -1.3
PDE6A-204ENST00000613228 IGHV3-35A0A0C4DH35 117 aa6.9□□□□□ -1.31
PDE6A-204ENST00000613228 M0R2P5 195 aa6.9□□□□□ -1.31
PDE6A-204ENST00000613228 UBE2L6O14933 153 aa6.9□□□□□ -1.31
PDE6A-204ENST00000613228 TMEM219Q86XT9 240 aa6.9□□□□□ -1.31
PDE6A-204ENST00000613228 TMEM89A2RUT3 159 aa6.9□□□□□ -1.31
PDE6A-204ENST00000613228 ATOX1O00244 68 aa6.9□□□□□ -1.31
PDE6A-204ENST00000613228 CGB3P0DN86 165 aa6.9□□□□□ -1.31
PDE6A-204ENST00000613228 CGB7P0DN87 165 aa6.9□□□□□ -1.31
PDE6A-204ENST00000613228 LAGE3Q14657 143 aa6.9□□□□□ -1.31
PDE6A-204ENST00000613228 ODF3L1Q8IXM7 274 aa6.9□□□□□ -1.31
PDE6A-204ENST00000613228 ZNRD1Q9P1U0 126 aa6.9□□□□□ -1.31
PDE6A-204ENST00000613228 LY6HO94772 140 aa6.89□□□□□ -1.31
PDE6A-204ENST00000613228 BRD3OSQ6XYD6 125 aa6.89□□□□□ -1.31
PDE6A-204ENST00000613228 MYMXA0A1B0GTQ4 84 aa6.89□□□□□ -1.31
PDE6A-204ENST00000613228 SH2D1AO60880 128 aa6.89□□□□□ -1.31
PDE6A-204ENST00000613228 IGLV2-23P01705 113 aa6.89□□□□□ -1.31
PDE6A-204ENST00000613228 ELANEP08246 267 aa6.89□□□□□ -1.31
PDE6A-204ENST00000613228 C10orf105Q8TEF2 133 aa6.89□□□□□ -1.31
PDE6A-204ENST00000613228 DNAJC30Q96LL9 226 aa6.89□□□□□ -1.31
PDE6A-204ENST00000613228 DUX3Q96PT4 197 aa6.89□□□□□ -1.31
PDE6A-204ENST00000613228 RBAKDNA6NC62 111 aa6.89□□□□□ -1.31
PDE6A-204ENST00000613228 EIF4EBP1Q13541 118 aaPredicted RBP6.89□□□□□ -1.31
PDE6A-204ENST00000613228 SHISA2Q6UWI4 295 aa6.89□□□□□ -1.31
PDE6A-204ENST00000613228 SMIM9A6NGZ8 99 aa6.89□□□□□ -1.31
PDE6A-204ENST00000613228 ODF1Q14990 250 aa6.89□□□□□ -1.31
PDE6A-204ENST00000613228 INAFM2P0DMQ5 153 aa6.88□□□□□ -1.31
PDE6A-204ENST00000613228 SPATA12Q7Z6I5 190 aa6.88□□□□□ -1.31
PDE6A-204ENST00000613228 TECTAO75443 2155 aa6.88□□□□□ -1.31
PDE6A-204ENST00000613228 ATG2AQ2TAZ0 1938 aa6.88□□□□□ -1.31
PDE6A-204ENST00000613228 IFI27P40305 119 aaPredicted RBP6.88□□□□□ -1.31
PDE6A-204ENST00000613228 RUSC1-AS1Q66K80 236 aa6.88□□□□□ -1.31
PDE6A-204ENST00000613228 EXOC3-AS1Q8N2X6 119 aa6.88□□□□□ -1.31
PDE6A-204ENST00000613228 FER1L5A0AVI2 2057 aa6.88□□□□□ -1.31
PDE6A-204ENST00000613228 IGLV1-47P01700 117 aa6.88□□□□□ -1.31
PDE6A-204ENST00000613228 HLA-DMBP28068 263 aa6.88□□□□□ -1.31
PDE6A-204ENST00000613228 GRNP28799 593 aaKnown RBP6.88□□□□□ -1.31
PDE6A-204ENST00000613228 STHQ8IWL8 128 aa6.88□□□□□ -1.31
PDE6A-204ENST00000613228 LY6G5BQ8NDX9 201 aa6.88□□□□□ -1.31
PDE6A-204ENST00000613228 YLPM1P49750 1951 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms