RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 PSG3Q16557 428 aa12.92□□□□□ -0.34
CNOT3-208ENST00000613073 C5orf64Q2M2E5 130 aa12.92□□□□□ -0.34
CNOT3-208ENST00000613073 C1orf122Q6ZSJ8 110 aa12.92□□□□□ -0.34
CNOT3-208ENST00000613073 OR5A1Q8NGJ0 315 aa12.92□□□□□ -0.34
CNOT3-208ENST00000613073 TTTY13Q9BZ97 58 aa12.92□□□□□ -0.34
CNOT3-208ENST00000613073 SIRPDQ9H106 197 aa12.92□□□□□ -0.34
CNOT3-208ENST00000613073 USP24Q9UPU5 2620 aa12.92□□□□□ -0.34
CNOT3-208ENST00000613073 DOPEY1Q5JWR5 2465 aa12.92□□□□□ -0.34
CNOT3-208ENST00000613073 I3L2K1 104 aa12.92□□□□□ -0.34
CNOT3-208ENST00000613073 SMAD7O15105 426 aaKnown RBP12.92□□□□□ -0.34
CNOT3-208ENST00000613073 ADAMTSL5Q6ZMM2 481 aa12.92□□□□□ -0.34
CNOT3-208ENST00000613073 NPBQ8NG41 125 aa12.92□□□□□ -0.34
CNOT3-208ENST00000613073 A0A1B0GV72 72 aa12.92□□□□□ -0.34
CNOT3-208ENST00000613073 NDUFA3O95167 84 aa12.92□□□□□ -0.34
CNOT3-208ENST00000613073 IFI27P40305 119 aaPredicted RBP12.92□□□□□ -0.34
CNOT3-208ENST00000613073 LMO4P61968 165 aa12.92□□□□□ -0.34
CNOT3-208ENST00000613073 ARMS2P0C7Q2 107 aa12.91□□□□□ -0.34
CNOT3-208ENST00000613073 CSN1S1P47710 185 aa12.91□□□□□ -0.34
CNOT3-208ENST00000613073 RAB9AP51151 201 aa12.91□□□□□ -0.34
CNOT3-208ENST00000613073 LYZP61626 148 aa12.91□□□□□ -0.34
CNOT3-208ENST00000613073 ATP6V0BQ99437 205 aa12.91□□□□□ -0.34
CNOT3-208ENST00000613073 IGHV4-39P01824 125 aa12.91□□□□□ -0.34
CNOT3-208ENST00000613073 CCDC144NLQ6NUI1 221 aa12.91□□□□□ -0.34
CNOT3-208ENST00000613073 BOD1L2Q8IYS8 172 aa12.91□□□□□ -0.34
CNOT3-208ENST00000613073 PRSS22Q9GZN4 317 aa12.91□□□□□ -0.34
CNOT3-208ENST00000613073 CENPEQ02224 2701 aa12.91□□□□□ -0.34
CNOT3-208ENST00000613073 C18orf15Q96N68 181 aa12.9□□□□□ -0.34
CNOT3-208ENST00000613073 GAGE12HA6NDE8 117 aa12.9□□□□□ -0.34
CNOT3-208ENST00000613073 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.9□□□□□ -0.34
CNOT3-208ENST00000613073 K7EIM0 57 aa12.9□□□□□ -0.34
CNOT3-208ENST00000613073 NDPQ00604 133 aa12.9□□□□□ -0.34
CNOT3-208ENST00000613073 RASL11BQ9BPW5 248 aa12.9□□□□□ -0.34
CNOT3-208ENST00000613073 MLST8Q9BVC4 326 aa12.9□□□□□ -0.34
CNOT3-208ENST00000613073 FXYD2P54710 66 aa12.89□□□□□ -0.35
CNOT3-208ENST00000613073 C19orf71A6NCJ1 209 aa12.89□□□□□ -0.35
CNOT3-208ENST00000613073 OVOL3O00110 214 aa12.89□□□□□ -0.35
CNOT3-208ENST00000613073 SMIM17P0DL12 118 aa12.89□□□□□ -0.35
CNOT3-208ENST00000613073 SERTM2A0A1B0GWG4 89 aa12.88□□□□□ -0.35
CNOT3-208ENST00000613073 WFDC2Q14508 124 aa12.88□□□□□ -0.35
CNOT3-208ENST00000613073 SH2D6Q7Z4S9 175 aa12.88□□□□□ -0.35
CNOT3-208ENST00000613073 PRNTQ86SH4 94 aa12.88□□□□□ -0.35
CNOT3-208ENST00000613073 TRAV26-1A0A087WT03 109 aa12.88□□□□□ -0.35
CNOT3-208ENST00000613073 A0A096LNJ9 63 aa12.88□□□□□ -0.35
CNOT3-208ENST00000613073 MINOS1Q5TGZ0 78 aa12.88□□□□□ -0.35
CNOT3-208ENST00000613073 ARPC1AQ92747 370 aa12.88□□□□□ -0.35
CNOT3-208ENST00000613073 MINOS1-NBL1R4GNA1 71 aa12.88□□□□□ -0.35
CNOT3-208ENST00000613073 ABCA2Q9BZC7 2435 aa12.88□□□□□ -0.35
CNOT3-208ENST00000613073 IGKV1-17P01599 117 aa12.87□□□□□ -0.35
CNOT3-208ENST00000613073 SAA4P35542 130 aa12.87□□□□□ -0.35
CNOT3-208ENST00000613073 ZNF462Q96JM2 2506 aa12.87□□□□□ -0.35
CNOT3-208ENST00000613073 TMEM8BA6NDV4 472 aa12.87□□□□□ -0.35
CNOT3-208ENST00000613073 SMIM13P0DJ93 91 aa12.87□□□□□ -0.35
CNOT3-208ENST00000613073 MYCNOSP40205 109 aa12.87□□□□□ -0.35
CNOT3-208ENST00000613073 CKS1BP61024 79 aa12.87□□□□□ -0.35
CNOT3-208ENST00000613073 ZNF562Q6V9R5 426 aa12.87□□□□□ -0.35
CNOT3-208ENST00000613073 SOX21Q9Y651 276 aaPredicted RBP12.87□□□□□ -0.35
CNOT3-208ENST00000613073 IGHV3OR16-10A0A075B7F0 116 aa12.86□□□□□ -0.35
CNOT3-208ENST00000613073 PRB1P04280 392 aa12.86□□□□□ -0.35
CNOT3-208ENST00000613073 BCL6BQ8N143 479 aaPredicted RBP12.86□□□□□ -0.35
CNOT3-208ENST00000613073 SRSF8Q9BRL6 282 aaKnown RBP12.86□□□□□ -0.35
CNOT3-208ENST00000613073 HIGD1AQ9Y241 93 aa12.86□□□□□ -0.35
CNOT3-208ENST00000613073 FAM208BQ5VWN6 2430 aa12.86□□□□□ -0.35
CNOT3-208ENST00000613073 IGHV3-23P01764 117 aa12.86□□□□□ -0.35
CNOT3-208ENST00000613073 UBE2E1P51965 193 aa12.86□□□□□ -0.35
CNOT3-208ENST00000613073 SCGB2A2Q13296 93 aa12.86□□□□□ -0.35
CNOT3-208ENST00000613073 SMPXQ9UHP9 88 aa12.86□□□□□ -0.35
CNOT3-208ENST00000613073 LTAP01374 205 aa12.86□□□□□ -0.35
CNOT3-208ENST00000613073 ETDBQ3ZM63 59 aa12.86□□□□□ -0.35
CNOT3-208ENST00000613073 CD300EQ496F6 205 aaPredicted RBP12.86□□□□□ -0.35
CNOT3-208ENST00000613073 Q8N6K4 173 aa12.86□□□□□ -0.35
CNOT3-208ENST00000613073 CCL19Q99731 98 aa12.86□□□□□ -0.35
CNOT3-208ENST00000613073 DKK2Q9UBU2 259 aa12.86□□□□□ -0.35
CNOT3-208ENST00000613073 A0A1B0GUT8 65 aa12.85□□□□□ -0.35
CNOT3-208ENST00000613073 TCRAP04437 139 aa12.85□□□□□ -0.35
CNOT3-208ENST00000613073 ATP5G2Q06055 141 aa12.85□□□□□ -0.35
CNOT3-208ENST00000613073 OR9G4Q8NGQ1 327 aa12.85□□□□□ -0.35
CNOT3-208ENST00000613073 AJUBAQ96IF1 538 aa12.85□□□□□ -0.35
CNOT3-208ENST00000613073 FANCD2OSQ96PS1 177 aa12.85□□□□□ -0.35
CNOT3-208ENST00000613073 Q9H3A6 140 aa12.85□□□□□ -0.35
CNOT3-208ENST00000613073 NHP2Q9NX24 153 aaKnown RBP12.85□□□□□ -0.35
CNOT3-208ENST00000613073 OOSP1A8MZH6 123 aa12.85□□□□□ -0.35
CNOT3-208ENST00000613073 AMTNQ6UX39 209 aa12.85□□□□□ -0.35
CNOT3-208ENST00000613073 GOLT1AQ6ZVE7 132 aa12.85□□□□□ -0.35
CNOT3-208ENST00000613073 STXBP6Q8NFX7 210 aa12.85□□□□□ -0.35
CNOT3-208ENST00000613073 OR4X2Q8NGF9 303 aa12.85□□□□□ -0.35
CNOT3-208ENST00000613073 SLC25A39Q9BZJ4 359 aaPredicted RBP12.85□□□□□ -0.35
CNOT3-208ENST00000613073 KLF12Q9Y4X4 402 aa12.85□□□□□ -0.35
CNOT3-208ENST00000613073 TMSB15BA0A087X1C1 80 aa12.84□□□□□ -0.35
CNOT3-208ENST00000613073 D6R8Y8 96 aa12.84□□□□□ -0.35
CNOT3-208ENST00000613073 HAX1O00165 279 aa12.84□□□□□ -0.35
CNOT3-208ENST00000613073 GP9P14770 177 aa12.84□□□□□ -0.35
CNOT3-208ENST00000613073 CT83Q5H943 113 aa12.84□□□□□ -0.35
CNOT3-208ENST00000613073 EXOC3-AS1Q8N2X6 119 aa12.84□□□□□ -0.35
CNOT3-208ENST00000613073 ZNF414Q96IQ9 312 aa12.84□□□□□ -0.35
CNOT3-208ENST00000613073 VGLL1Q99990 258 aa12.84□□□□□ -0.35
CNOT3-208ENST00000613073 LRRK2Q5S007 2527 aa12.84□□□□□ -0.35
CNOT3-208ENST00000613073 INSL3P51460 131 aa12.83□□□□□ -0.36
CNOT3-208ENST00000613073 CRYBA4P53673 196 aa12.83□□□□□ -0.36
CNOT3-208ENST00000613073 EBI3Q14213 229 aa12.83□□□□□ -0.36
CNOT3-208ENST00000613073 TMEM95Q3KNT9 176 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms