RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 MRPL32Q9BYC8 188 aaKnown RBP11.54□□□□□ -0.56
CSNK1E-215ENST00000612795 C1QBP02746 253 aa11.53□□□□□ -0.56
CSNK1E-215ENST00000612795 GPX1P07203 203 aa11.53□□□□□ -0.56
CSNK1E-215ENST00000612795 OR4E1P0C645 316 aa11.53□□□□□ -0.56
CSNK1E-215ENST00000612795 GYPEP15421 78 aa11.53□□□□□ -0.56
CSNK1E-215ENST00000612795 ID3Q02535 119 aa11.53□□□□□ -0.56
CSNK1E-215ENST00000612795 TMEM37Q8WXS4 190 aa11.53□□□□□ -0.56
CSNK1E-215ENST00000612795 TP53TG3Q9ULZ0 132 aa11.53□□□□□ -0.56
CSNK1E-215ENST00000612795 RCL1Q9Y2P8 373 aaKnown RBP11.53□□□□□ -0.56
CSNK1E-215ENST00000612795 TRAV5A0A0B4J249 113 aa11.52□□□□□ -0.57
CSNK1E-215ENST00000612795 ORM1P02763 201 aa11.52□□□□□ -0.57
CSNK1E-215ENST00000612795 C4orf46Q504U0 113 aa11.52□□□□□ -0.57
CSNK1E-215ENST00000612795 TMEM14EPQ6UXP3 125 aa11.52□□□□□ -0.57
CSNK1E-215ENST00000612795 SMIM8Q96KF7 97 aa11.52□□□□□ -0.57
CSNK1E-215ENST00000612795 TXNDC17Q9BRA2 123 aa11.52□□□□□ -0.57
CSNK1E-215ENST00000612795 Q9HAA7 133 aa11.52□□□□□ -0.57
CSNK1E-215ENST00000612795 M0R3E3 92 aa11.51□□□□□ -0.57
CSNK1E-215ENST00000612795 SFTA3P0C7M3 94 aa11.51□□□□□ -0.57
CSNK1E-215ENST00000612795 MCFD2Q8NI22 146 aa11.51□□□□□ -0.57
CSNK1E-215ENST00000612795 MRPL53Q96EL3 112 aaKnown RBP11.51□□□□□ -0.57
CSNK1E-215ENST00000612795 LINC00477Q96M19 166 aa11.51□□□□□ -0.57
CSNK1E-215ENST00000612795 IGHV1OR15-1A0A075B7D0 117 aa11.5□□□□□ -0.57
CSNK1E-215ENST00000612795 C9JCJ5 164 aa11.5□□□□□ -0.57
CSNK1E-215ENST00000612795 FAM19A4Q96LR4 140 aa11.5□□□□□ -0.57
CSNK1E-215ENST00000612795 LRP1Q07954 4544 aaKnown RBP11.5□□□□□ -0.57
CSNK1E-215ENST00000612795 IGHV3-38A0A0C4DH36 116 aa11.49□□□□□ -0.57
CSNK1E-215ENST00000612795 ZNF253O75346 499 aa11.49□□□□□ -0.57
CSNK1E-215ENST00000612795 SCGB1D2O95969 90 aa11.49□□□□□ -0.57
CSNK1E-215ENST00000612795 AP3S2P59780 193 aa11.49□□□□□ -0.57
CSNK1E-215ENST00000612795 SPCS2Q15005 226 aa11.49□□□□□ -0.57
CSNK1E-215ENST00000612795 Q6ZRG5 221 aa11.49□□□□□ -0.57
CSNK1E-215ENST00000612795 ZNF479Q96JC4 524 aa11.49□□□□□ -0.57
CSNK1E-215ENST00000612795 MGST2Q99735 147 aa11.49□□□□□ -0.57
CSNK1E-215ENST00000612795 SLC25A21Q9BQT8 299 aaPredicted RBP11.49□□□□□ -0.57
CSNK1E-215ENST00000612795 CRISP2P16562 243 aa11.48□□□□□ -0.57
CSNK1E-215ENST00000612795 TOMM5Q8N4H5 51 aa11.48□□□□□ -0.57
CSNK1E-215ENST00000612795 SRRQ9GZT4 340 aa11.48□□□□□ -0.57
CSNK1E-215ENST00000612795 AGPAT4-IT1Q9H0P7 198 aa11.48□□□□□ -0.57
CSNK1E-215ENST00000612795 DNAJC4Q9NNZ3 241 aa11.48□□□□□ -0.57
CSNK1E-215ENST00000612795 PRELID1Q9Y255 219 aa11.48□□□□□ -0.57
CSNK1E-215ENST00000612795 FABP12A6NFH5 140 aa11.47□□□□□ -0.57
CSNK1E-215ENST00000612795 TSC22D2O75157 780 aa11.47□□□□□ -0.57
CSNK1E-215ENST00000612795 PPT1P50897 306 aa11.47□□□□□ -0.57
CSNK1E-215ENST00000612795 TMEM78Q5T7P6 136 aa11.47□□□□□ -0.57
CSNK1E-215ENST00000612795 PRR9Q5T870 116 aa11.47□□□□□ -0.57
CSNK1E-215ENST00000612795 Q6ZSA8 131 aa11.47□□□□□ -0.57
CSNK1E-215ENST00000612795 IQCF2Q8IXL9 164 aa11.47□□□□□ -0.57
CSNK1E-215ENST00000612795 OR1L4Q8NGR5 311 aa11.47□□□□□ -0.57
CSNK1E-215ENST00000612795 RAB2BQ8WUD1 216 aa11.47□□□□□ -0.57
CSNK1E-215ENST00000612795 PFDN5Q99471 154 aa11.47□□□□□ -0.57
CSNK1E-215ENST00000612795 GGACTQ9BVM4 153 aa11.47□□□□□ -0.57
CSNK1E-215ENST00000612795 TRBV19A0A075B6N1 114 aa11.46□□□□□ -0.57
CSNK1E-215ENST00000612795 IBA57-AS1B1ANH7 110 aa11.46□□□□□ -0.57
CSNK1E-215ENST00000612795 NMBP08949 121 aa11.46□□□□□ -0.57
CSNK1E-215ENST00000612795 HIST1H1EP10412 219 aaKnown RBP11.46□□□□□ -0.57
CSNK1E-215ENST00000612795 CAMLGP49069 296 aa11.46□□□□□ -0.57
CSNK1E-215ENST00000612795 RAB31Q13636 194 aa11.46□□□□□ -0.57
CSNK1E-215ENST00000612795 LINC01556Q5JQF7 62 aa11.46□□□□□ -0.57
CSNK1E-215ENST00000612795 ZFAND2AQ8N6M9 145 aa11.46□□□□□ -0.57
CSNK1E-215ENST00000612795 NHLRC2Q8NBF2 726 aa11.46□□□□□ -0.57
CSNK1E-215ENST00000612795 OR10G4Q8NGN3 311 aa11.46□□□□□ -0.57
CSNK1E-215ENST00000612795 SOSTQ9BQB4 213 aa11.46□□□□□ -0.57
CSNK1E-215ENST00000612795 SLC25A31Q9H0C2 315 aa11.46□□□□□ -0.57
CSNK1E-215ENST00000612795 TIMM9Q9Y5J7 89 aa11.46□□□□□ -0.57
CSNK1E-215ENST00000612795 IGKV2-40A0A087WW87 121 aaPredicted RBP11.45□□□□□ -0.58
CSNK1E-215ENST00000612795 OXTP01178 125 aa11.45□□□□□ -0.58
CSNK1E-215ENST00000612795 IGKV2D-40P01614 121 aaPredicted RBP11.45□□□□□ -0.58
CSNK1E-215ENST00000612795 ARL16Q0P5N6 197 aa11.45□□□□□ -0.58
CSNK1E-215ENST00000612795 MIC13Q5XKP0 118 aa11.45□□□□□ -0.58
CSNK1E-215ENST00000612795 Q6ZQT7 251 aa11.45□□□□□ -0.58
CSNK1E-215ENST00000612795 C9orf47Q6ZRZ4 202 aa11.45□□□□□ -0.58
CSNK1E-215ENST00000612795 SH2D6Q7Z4S9 175 aa11.45□□□□□ -0.58
CSNK1E-215ENST00000612795 BLNKQ8WV28 456 aa11.45□□□□□ -0.58
CSNK1E-215ENST00000612795 AAMDCQ9H7C9 122 aa11.45□□□□□ -0.58
CSNK1E-215ENST00000612795 FAT3Q8TDW7 4589 aa11.44□□□□□ -0.58
CSNK1E-215ENST00000612795 C9orf170A2RU37 121 aa11.44□□□□□ -0.58
CSNK1E-215ENST00000612795 SMIM18P0DKX4 95 aa11.44□□□□□ -0.58
CSNK1E-215ENST00000612795 TAS2R30P59541 319 aa11.44□□□□□ -0.58
CSNK1E-215ENST00000612795 UBE2MP61081 183 aaKnown RBP11.44□□□□□ -0.58
CSNK1E-215ENST00000612795 MUC21Q5SSG8 566 aa11.44□□□□□ -0.58
CSNK1E-215ENST00000612795 NRARPQ7Z6K4 114 aa11.44□□□□□ -0.58
CSNK1E-215ENST00000612795 EXOC3-AS1Q8N2X6 119 aa11.44□□□□□ -0.58
CSNK1E-215ENST00000612795 C12orf45Q8N5I9 185 aaPredicted RBP11.44□□□□□ -0.58
CSNK1E-215ENST00000612795 TRIM63Q969Q1 353 aa11.44□□□□□ -0.58
CSNK1E-215ENST00000612795 TRAV8-6A0A0B4J262 113 aa11.43□□□□□ -0.58
CSNK1E-215ENST00000612795 LOC100131303A0A0U1RQF7 123 aa11.43□□□□□ -0.58
CSNK1E-215ENST00000612795 NDUFB4O95168 129 aa11.43□□□□□ -0.58
CSNK1E-215ENST00000612795 TNFSF8P32971 234 aa11.43□□□□□ -0.58
CSNK1E-215ENST00000612795 PDE6HQ13956 83 aa11.43□□□□□ -0.58
CSNK1E-215ENST00000612795 PYDC2Q56P42 97 aa11.43□□□□□ -0.58
CSNK1E-215ENST00000612795 OR10J3Q5JRS4 329 aa11.43□□□□□ -0.58
CSNK1E-215ENST00000612795 SCXQ7RTU7 201 aa11.43□□□□□ -0.58
CSNK1E-215ENST00000612795 BOLA1Q9Y3E2 137 aa11.43□□□□□ -0.58
CSNK1E-215ENST00000612795 TRAV4A0A0B4J268 109 aa11.42□□□□□ -0.58
CSNK1E-215ENST00000612795 IGHV3-30P01768 117 aa11.42□□□□□ -0.58
CSNK1E-215ENST00000612795 IGHV3-33P01772 117 aa11.42□□□□□ -0.58
CSNK1E-215ENST00000612795 IGHV3-30-3P0DP02 117 aa11.42□□□□□ -0.58
CSNK1E-215ENST00000612795 IGHV3-30-5P0DP03 117 aa11.42□□□□□ -0.58
CSNK1E-215ENST00000612795 FAM122CQ6P4D5 195 aa11.42□□□□□ -0.58
CSNK1E-215ENST00000612795 DYNC2LI1Q8TCX1 351 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms