RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 DOPEY2Q9Y3R5 2298 aa10.88□□□□□ -0.67
PCDHGA3-202ENST00000612467 FBN2P35556 2912 aa10.87□□□□□ -0.67
PCDHGA3-202ENST00000612467 PDE6HQ13956 83 aa10.87□□□□□ -0.67
PCDHGA3-202ENST00000612467 Q6ZS46 218 aa10.87□□□□□ -0.67
PCDHGA3-202ENST00000612467 TRBV6-1A0A0K0K1D8 114 aa10.87□□□□□ -0.67
PCDHGA3-202ENST00000612467 hDV102S1A0JD36 115 aa10.87□□□□□ -0.67
PCDHGA3-202ENST00000612467 IGLL1P15814 213 aa10.87□□□□□ -0.67
PCDHGA3-202ENST00000612467 DEFB1P60022 68 aa10.87□□□□□ -0.67
PCDHGA3-202ENST00000612467 Q6ZN92 141 aa10.87□□□□□ -0.67
PCDHGA3-202ENST00000612467 PIFOQ8TCI5 191 aa10.87□□□□□ -0.67
PCDHGA3-202ENST00000612467 BUB3O43684 328 aa10.86□□□□□ -0.67
PCDHGA3-202ENST00000612467 GAS8-AS1O95177 125 aa10.86□□□□□ -0.67
PCDHGA3-202ENST00000612467 TXN2Q99757 166 aa10.86□□□□□ -0.67
PCDHGA3-202ENST00000612467 ZNF462Q96JM2 2506 aa10.86□□□□□ -0.67
PCDHGA3-202ENST00000612467 FAM231BA6NCW3 169 aa10.86□□□□□ -0.67
PCDHGA3-202ENST00000612467 D6R8Y8 96 aa10.86□□□□□ -0.67
PCDHGA3-202ENST00000612467 LEPROTL1O95214 131 aa10.86□□□□□ -0.67
PCDHGA3-202ENST00000612467 NCR2O95944 276 aa10.86□□□□□ -0.67
PCDHGA3-202ENST00000612467 PSG9Q00887 426 aa10.86□□□□□ -0.67
PCDHGA3-202ENST00000612467 Q6ZVH6 145 aa10.86□□□□□ -0.67
PCDHGA3-202ENST00000612467 IL17RELQ6ZVW7 336 aa10.86□□□□□ -0.67
PCDHGA3-202ENST00000612467 RNASE8Q8TDE3 154 aaKnown RBP10.86□□□□□ -0.67
PCDHGA3-202ENST00000612467 IGHV4-30-2A0A087WSY4 118 aa10.86□□□□□ -0.67
PCDHGA3-202ENST00000612467 RIGQ13278 110 aa10.86□□□□□ -0.67
PCDHGA3-202ENST00000612467 FAM162BQ5T6X4 162 aa10.86□□□□□ -0.67
PCDHGA3-202ENST00000612467 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.86□□□□□ -0.67
PCDHGA3-202ENST00000612467 NDFIP1Q9BT67 221 aa10.86□□□□□ -0.67
PCDHGA3-202ENST00000612467 IGHV3-11P01762 117 aa10.85□□□□□ -0.67
PCDHGA3-202ENST00000612467 IFI27P40305 119 aaPredicted RBP10.85□□□□□ -0.67
PCDHGA3-202ENST00000612467 GAGE1Q13065 139 aa10.85□□□□□ -0.67
PCDHGA3-202ENST00000612467 TMEM70Q9BUB7 260 aa10.85□□□□□ -0.67
PCDHGA3-202ENST00000612467 ORM1P02763 201 aa10.85□□□□□ -0.67
PCDHGA3-202ENST00000612467 TCTAP57738 103 aa10.85□□□□□ -0.67
PCDHGA3-202ENST00000612467 CCL19Q99731 98 aa10.85□□□□□ -0.67
PCDHGA3-202ENST00000612467 ABCA12Q86UK0 2595 aa10.84□□□□□ -0.67
PCDHGA3-202ENST00000612467 J3KRW8 73 aa10.84□□□□□ -0.67
PCDHGA3-202ENST00000612467 OR4C46A6NHA9 309 aa10.84□□□□□ -0.67
PCDHGA3-202ENST00000612467 SYS1-DBNDD2H3BUS1 97 aa10.84□□□□□ -0.67
PCDHGA3-202ENST00000612467 USP24Q9UPU5 2620 aa10.84□□□□□ -0.67
PCDHGA3-202ENST00000612467 IGKV3-7A0A075B6H7 116 aa10.83□□□□□ -0.68
PCDHGA3-202ENST00000612467 SPRY2O43597 315 aa10.83□□□□□ -0.68
PCDHGA3-202ENST00000612467 PAX8Q06710 450 aa10.83□□□□□ -0.68
PCDHGA3-202ENST00000612467 TWIST1Q15672 202 aa10.83□□□□□ -0.68
PCDHGA3-202ENST00000612467 UNQ9165/PRO28630Q6UXU0 137 aa10.83□□□□□ -0.68
PCDHGA3-202ENST00000612467 ANKRD17O75179 2603 aaKnown RBP10.83□□□□□ -0.68
PCDHGA3-202ENST00000612467 TRAV8-2A0A0B4J237 113 aa10.83□□□□□ -0.68
PCDHGA3-202ENST00000612467 IGHV1-69DA0A0B4J2H0 117 aa10.83□□□□□ -0.68
PCDHGA3-202ENST00000612467 IGHV1-69P01742 117 aa10.83□□□□□ -0.68
PCDHGA3-202ENST00000612467 HNRNPA3P51991 378 aaKnown RBP10.83□□□□□ -0.68
PCDHGA3-202ENST00000612467 BLCAPP62952 87 aa10.83□□□□□ -0.68
PCDHGA3-202ENST00000612467 STPG4Q8N801 248 aa10.83□□□□□ -0.68
PCDHGA3-202ENST00000612467 UQCR10Q9UDW1 63 aa10.83□□□□□ -0.68
PCDHGA3-202ENST00000612467 CUBNO60494 3623 aa10.83□□□□□ -0.68
PCDHGA3-202ENST00000612467 TRAV41A0A0B4J266 112 aa10.82□□□□□ -0.68
PCDHGA3-202ENST00000612467 GOSR1O95249 250 aa10.82□□□□□ -0.68
PCDHGA3-202ENST00000612467 AVPP01185 164 aa10.82□□□□□ -0.68
PCDHGA3-202ENST00000612467 PRB1P04280 392 aa10.82□□□□□ -0.68
PCDHGA3-202ENST00000612467 HINT1P49773 126 aaPredicted RBP10.82□□□□□ -0.68
PCDHGA3-202ENST00000612467 ATP5J2P56134 94 aa10.82□□□□□ -0.68
PCDHGA3-202ENST00000612467 MAPK1IP1LQ8NDC0 245 aa10.82□□□□□ -0.68
PCDHGA3-202ENST00000612467 KLK15Q9H2R5 256 aa10.82□□□□□ -0.68
PCDHGA3-202ENST00000612467 C11orf21Q9P2W6 132 aa10.82□□□□□ -0.68
PCDHGA3-202ENST00000612467 TRAV9-2A0A087WT02 112 aa10.82□□□□□ -0.68
PCDHGA3-202ENST00000612467 TRGV3P03979 118 aa10.82□□□□□ -0.68
PCDHGA3-202ENST00000612467 IGF1P05019 195 aa10.82□□□□□ -0.68
PCDHGA3-202ENST00000612467 S100A7AQ86SG5 101 aa10.82□□□□□ -0.68
PCDHGA3-202ENST00000612467 WFDC3Q8IUB2 231 aa10.82□□□□□ -0.68
PCDHGA3-202ENST00000612467 PRSS3P2Q8NHM4 247 aa10.82□□□□□ -0.68
PCDHGA3-202ENST00000612467 EEF1AKMT3Q96AZ1 226 aa10.82□□□□□ -0.68
PCDHGA3-202ENST00000612467 CHCHD1Q96BP2 118 aaKnown RBP10.82□□□□□ -0.68
PCDHGA3-202ENST00000612467 PTPN13Q12923 2485 aa10.82□□□□□ -0.68
PCDHGA3-202ENST00000612467 H3BUX3 64 aa10.81□□□□□ -0.68
PCDHGA3-202ENST00000612467 MRPL51Q4U2R6 128 aaKnown RBP10.81□□□□□ -0.68
PCDHGA3-202ENST00000612467 AGPAT4-IT1Q9H0P7 198 aa10.81□□□□□ -0.68
PCDHGA3-202ENST00000612467 EDN2P20800 178 aa10.81□□□□□ -0.68
PCDHGA3-202ENST00000612467 RBX1P62877 108 aa10.81□□□□□ -0.68
PCDHGA3-202ENST00000612467 ATP5G2Q06055 141 aa10.81□□□□□ -0.68
PCDHGA3-202ENST00000612467 FOXE3Q13461 319 aa10.81□□□□□ -0.68
PCDHGA3-202ENST00000612467 TMEM95Q3KNT9 176 aa10.81□□□□□ -0.68
PCDHGA3-202ENST00000612467 FER1L6-AS1Q8NA97 138 aa10.81□□□□□ -0.68
PCDHGA3-202ENST00000612467 MOB4Q9Y3A3 225 aa10.81□□□□□ -0.68
PCDHGA3-202ENST00000612467 A0A096LNJ9 63 aa10.8□□□□□ -0.68
PCDHGA3-202ENST00000612467 SMAD7O15105 426 aaKnown RBP10.8□□□□□ -0.68
PCDHGA3-202ENST00000612467 GATA1P15976 413 aaPredicted RBP10.8□□□□□ -0.68
PCDHGA3-202ENST00000612467 SAPCD1Q5SSQ6 148 aa10.8□□□□□ -0.68
PCDHGA3-202ENST00000612467 C8orf86Q6ZUL3 223 aa10.8□□□□□ -0.68
PCDHGA3-202ENST00000612467 C10orf105Q8TEF2 133 aa10.8□□□□□ -0.68
PCDHGA3-202ENST00000612467 PIMREGQ9BSJ6 248 aa10.8□□□□□ -0.68
PCDHGA3-202ENST00000612467 AP5S1Q9NUS5 200 aa10.8□□□□□ -0.68
PCDHGA3-202ENST00000612467 SIGLEC8Q9NYZ4 499 aa10.8□□□□□ -0.68
PCDHGA3-202ENST00000612467 NPYP01303 97 aa10.8□□□□□ -0.68
PCDHGA3-202ENST00000612467 TSPOP30536 169 aa10.8□□□□□ -0.68
PCDHGA3-202ENST00000612467 FAM104BQ5XKR9 115 aa10.8□□□□□ -0.68
PCDHGA3-202ENST00000612467 M0QZK8 103 aa10.79□□□□□ -0.68
PCDHGA3-202ENST00000612467 SCGB2A1O75556 95 aa10.79□□□□□ -0.68
PCDHGA3-202ENST00000612467 FA2HQ7L5A8 372 aa10.79□□□□□ -0.68
PCDHGA3-202ENST00000612467 MRPL52Q86TS9 123 aaKnown RBP10.79□□□□□ -0.68
PCDHGA3-202ENST00000612467 PRELID3AQ96N28 172 aa10.79□□□□□ -0.68
PCDHGA3-202ENST00000612467 PSMG3-AS1Q96PY0 264 aa10.79□□□□□ -0.68
PCDHGA3-202ENST00000612467 MXRA5Q9NR99 2828 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 267.8 ms