RNA–Protein interactions for RNA: ENST00000611659.4

TPM3-223, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-223ENST00000611659 ARPC1AQ92747 370 aa9.34□□□□□ -0.91
TPM3-223ENST00000611659 AKAP13Q12802 2813 aa9.34□□□□□ -0.91
TPM3-223ENST00000611659 TRAV40A0A0B4J280 105 aa9.34□□□□□ -0.91
TPM3-223ENST00000611659 IGHV3-35A0A0C4DH35 117 aa9.34□□□□□ -0.91
TPM3-223ENST00000611659 TNFRSF6BO95407 300 aa9.34□□□□□ -0.91
TPM3-223ENST00000611659 CEND1Q8N111 149 aa9.34□□□□□ -0.91
TPM3-223ENST00000611659 ZNF479Q96JC4 524 aa9.34□□□□□ -0.91
TPM3-223ENST00000611659 J3QR89 54 aa9.33□□□□□ -0.92
TPM3-223ENST00000611659 DPM2O94777 84 aa9.33□□□□□ -0.92
TPM3-223ENST00000611659 RNF185Q96GF1 192 aa9.33□□□□□ -0.92
TPM3-223ENST00000611659 HIGD1BQ9P298 99 aa9.33□□□□□ -0.92
TPM3-223ENST00000611659 LYNX1G3V0Z9 82 aa9.33□□□□□ -0.92
TPM3-223ENST00000611659 IGLV1-47P01700 117 aa9.33□□□□□ -0.92
TPM3-223ENST00000611659 LYNX1P0DP58 116 aa9.33□□□□□ -0.92
TPM3-223ENST00000611659 BMI1P35226 326 aa9.33□□□□□ -0.92
TPM3-223ENST00000611659 CD300EQ496F6 205 aaPredicted RBP9.33□□□□□ -0.92
TPM3-223ENST00000611659 GFRALQ6UXV0 394 aa9.33□□□□□ -0.92
TPM3-223ENST00000611659 PHLDA1Q8WV24 401 aaPredicted RBP9.33□□□□□ -0.92
TPM3-223ENST00000611659 NBASA2RRP1 2371 aa9.33□□□□□ -0.92
TPM3-223ENST00000611659 Q5PR19 223 aa9.32□□□□□ -0.92
TPM3-223ENST00000611659 LCNL1Q6ZST4 164 aa9.32□□□□□ -0.92
TPM3-223ENST00000611659 HIST1H4GQ99525 98 aa9.32□□□□□ -0.92
TPM3-223ENST00000611659 IGLL5B9A064 214 aa9.32□□□□□ -0.92
TPM3-223ENST00000611659 C16orf97H3BN30 126 aa9.32□□□□□ -0.92
TPM3-223ENST00000611659 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.32□□□□□ -0.92
TPM3-223ENST00000611659 TIMM23O14925 209 aa9.32□□□□□ -0.92
TPM3-223ENST00000611659 CEACAM4O75871 244 aa9.32□□□□□ -0.92
TPM3-223ENST00000611659 PDE6HQ13956 83 aa9.32□□□□□ -0.92
TPM3-223ENST00000611659 MAPKAPK5-AS1Q8N8E1 139 aa9.32□□□□□ -0.92
TPM3-223ENST00000611659 TNFRSF14Q92956 283 aa9.32□□□□□ -0.92
TPM3-223ENST00000611659 NXT2Q9NPJ8 142 aaKnown RBP9.32□□□□□ -0.92
TPM3-223ENST00000611659 SPANXB1Q9NS25 103 aaPredicted RBP9.32□□□□□ -0.92
TPM3-223ENST00000611659 MRPL35Q9NZE8 188 aaKnown RBP9.32□□□□□ -0.92
TPM3-223ENST00000611659 TNFRSF13BO14836 293 aaPredicted RBP9.31□□□□□ -0.92
TPM3-223ENST00000611659 HES1Q14469 280 aa9.31□□□□□ -0.92
TPM3-223ENST00000611659 FOXI2Q6ZQN5 318 aa9.31□□□□□ -0.92
TPM3-223ENST00000611659 NDUFA3O95167 84 aa9.31□□□□□ -0.92
TPM3-223ENST00000611659 IGLC6P0CF74 106 aa9.31□□□□□ -0.92
TPM3-223ENST00000611659 CEACAM3P40198 252 aa9.31□□□□□ -0.92
TPM3-223ENST00000611659 ERCC8Q13216 396 aa9.31□□□□□ -0.92
TPM3-223ENST00000611659 RNASE6Q93091 150 aaKnown RBP9.31□□□□□ -0.92
TPM3-223ENST00000611659 RALYQ9UKM9 306 aaKnown RBP9.31□□□□□ -0.92
TPM3-223ENST00000611659 F8W1H4 67 aa9.31□□□□□ -0.92
TPM3-223ENST00000611659 ZGRF1Q86YA3 2104 aa9.3□□□□□ -0.92
TPM3-223ENST00000611659 WNK2Q9Y3S1 2297 aa9.3□□□□□ -0.92
TPM3-223ENST00000611659 E9PLD3 99 aa9.3□□□□□ -0.92
TPM3-223ENST00000611659 SPAG8Q99932 426 aaPredicted RBP9.3□□□□□ -0.92
TPM3-223ENST00000611659 TM2D2Q9BX73 214 aa9.3□□□□□ -0.92
TPM3-223ENST00000611659 ZMAT4Q9H898 229 aa9.3□□□□□ -0.92
TPM3-223ENST00000611659 ONECUT1Q9UBC0 465 aa9.3□□□□□ -0.92
TPM3-223ENST00000611659 TRAV26-2A0A0B4J265 109 aa9.3□□□□□ -0.92
TPM3-223ENST00000611659 RPL7P18124 248 aaKnown RBP9.3□□□□□ -0.92
TPM3-223ENST00000611659 C12orf74Q32Q52 190 aa9.3□□□□□ -0.92
TPM3-223ENST00000611659 MYOZ3Q8TDC0 251 aa9.3□□□□□ -0.92
TPM3-223ENST00000611659 UFC1Q9Y3C8 167 aa9.3□□□□□ -0.92
TPM3-223ENST00000611659 RELNP78509 3460 aa9.3□□□□□ -0.92
TPM3-223ENST00000611659 A0A1B0GV72 72 aa9.29□□□□□ -0.92
TPM3-223ENST00000611659 ATP5LO75964 103 aa9.29□□□□□ -0.92
TPM3-223ENST00000611659 INSL3P51460 131 aa9.29□□□□□ -0.92
TPM3-223ENST00000611659 MFAP4P55083 255 aa9.29□□□□□ -0.92
TPM3-223ENST00000611659 DTX2Q86UW9 622 aa9.29□□□□□ -0.92
TPM3-223ENST00000611659 TTC9CQ8N5M4 171 aa9.29□□□□□ -0.92
TPM3-223ENST00000611659 PIFOQ8TCI5 191 aa9.29□□□□□ -0.92
TPM3-223ENST00000611659 RAB1BQ9H0U4 201 aa9.29□□□□□ -0.92
TPM3-223ENST00000611659 ANKRD11Q6UB99 2663 aaPredicted RBP9.29□□□□□ -0.92
TPM3-223ENST00000611659 FABP5P3A8MUU1 101 aa9.29□□□□□ -0.92
TPM3-223ENST00000611659 ATP5G2Q06055 141 aa9.29□□□□□ -0.92
TPM3-223ENST00000611659 GAGE13Q4V321 117 aa9.29□□□□□ -0.92
TPM3-223ENST00000611659 KAAG1Q9UBP8 84 aa9.29□□□□□ -0.92
TPM3-223ENST00000611659 VSTM5A8MXK1 200 aa9.29□□□□□ -0.92
TPM3-223ENST00000611659 CCDC144NLQ6NUI1 221 aa9.29□□□□□ -0.92
TPM3-223ENST00000611659 ATP6V0BQ99437 205 aa9.29□□□□□ -0.92
TPM3-223ENST00000611659 SHISA9B4DS77 424 aa9.28□□□□□ -0.92
TPM3-223ENST00000611659 EFNA4P52798 201 aa9.28□□□□□ -0.92
TPM3-223ENST00000611659 CLUHP3Q96NS8 147 aa9.28□□□□□ -0.92
TPM3-223ENST00000611659 KLK15Q9H2R5 256 aa9.28□□□□□ -0.92
TPM3-223ENST00000611659 AGRNO00468 2067 aa9.28□□□□□ -0.92
TPM3-223ENST00000611659 NBR2O15453 112 aa9.28□□□□□ -0.92
TPM3-223ENST00000611659 TRGV3P03979 118 aa9.28□□□□□ -0.92
TPM3-223ENST00000611659 PSMG4Q5JS54 123 aa9.28□□□□□ -0.92
TPM3-223ENST00000611659 SFTA2Q6UW10 78 aa9.28□□□□□ -0.92
TPM3-223ENST00000611659 WFDC12Q8WWY7 111 aa9.28□□□□□ -0.92
TPM3-223ENST00000611659 TMEM190Q8WZ59 177 aa9.28□□□□□ -0.92
TPM3-223ENST00000611659 SMPXQ9UHP9 88 aa9.28□□□□□ -0.92
TPM3-223ENST00000611659 SPTA1P02549 2419 aa9.28□□□□□ -0.92
TPM3-223ENST00000611659 A0A1B0GWB2 263 aa9.27□□□□□ -0.92
TPM3-223ENST00000611659 NCBP2LA6PVI3 153 aaKnown RBP9.27□□□□□ -0.92
TPM3-223ENST00000611659 PRRG2O14669 202 aa9.27□□□□□ -0.92
TPM3-223ENST00000611659 THBDP07204 575 aa9.27□□□□□ -0.92
TPM3-223ENST00000611659 SCGB1A1P11684 91 aa9.27□□□□□ -0.92
TPM3-223ENST00000611659 ZNF575Q86XF7 245 aa9.27□□□□□ -0.92
TPM3-223ENST00000611659 DYNAPQ8N1N2 210 aa9.27□□□□□ -0.92
TPM3-223ENST00000611659 RNF182Q8N6D2 247 aa9.27□□□□□ -0.92
TPM3-223ENST00000611659 C21orf62Q9NYP8 219 aa9.27□□□□□ -0.92
TPM3-223ENST00000611659 IGHV3-66A0A0C4DH42 116 aa9.27□□□□□ -0.93
TPM3-223ENST00000611659 A0A0G2JNJ9 132 aa9.27□□□□□ -0.93
TPM3-223ENST00000611659 PRAC2D3DTV9 90 aa9.27□□□□□ -0.93
TPM3-223ENST00000611659 IL17RELQ6ZVW7 336 aa9.27□□□□□ -0.93
TPM3-223ENST00000611659 Q8N8P6 123 aa9.27□□□□□ -0.93
TPM3-223ENST00000611659 Q9UFV3 132 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms