RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 GLMPQ8WWB7 406 aa21.51■■□□□ 1.03
CSPG5-205ENST00000610462 UBR5O95071 2799 aaPredicted RBP21.5■■□□□ 1.03
CSPG5-205ENST00000610462 TGFAP01135 160 aa21.5■■□□□ 1.03
CSPG5-205ENST00000610462 NTF3P20783 257 aa21.5■■□□□ 1.03
CSPG5-205ENST00000610462 KRTDAPP60985 99 aa21.5■■□□□ 1.03
CSPG5-205ENST00000610462 LOXL1Q08397 574 aaPredicted RBP21.5■■□□□ 1.03
CSPG5-205ENST00000610462 TMSB15BA0A087X1C1 80 aa21.49■■□□□ 1.03
CSPG5-205ENST00000610462 RPS20P60866 119 aaKnown RBP21.49■■□□□ 1.03
CSPG5-205ENST00000610462 CFHR3Q02985 330 aa21.49■■□□□ 1.03
CSPG5-205ENST00000610462 RNASEKQ6P5S7 137 aaKnown RBP21.49■■□□□ 1.03
CSPG5-205ENST00000610462 TPPP3Q9BW30 176 aa21.49■■□□□ 1.03
CSPG5-205ENST00000610462 ZNF580Q9UK33 172 aa21.49■■□□□ 1.03
CSPG5-205ENST00000610462 CELSR2Q9HCU4 2923 aa21.49■■□□□ 1.03
CSPG5-205ENST00000610462 EREGO14944 169 aa21.49■■□□□ 1.03
CSPG5-205ENST00000610462 UNQ9165/PRO28630Q6UXU0 137 aa21.49■■□□□ 1.03
CSPG5-205ENST00000610462 IGHV3-11P01762 117 aa21.48■■□□□ 1.03
CSPG5-205ENST00000610462 SRSF2Q01130 221 aaKnown RBP21.48■■□□□ 1.03
CSPG5-205ENST00000610462 LYZL1Q6UWQ5 148 aa21.48■■□□□ 1.03
CSPG5-205ENST00000610462 MAPK1IP1LQ8NDC0 245 aa21.48■■□□□ 1.03
CSPG5-205ENST00000610462 A0A0G2JLM5 398 aa21.48■■□□□ 1.03
CSPG5-205ENST00000610462 OR4X2Q8NGF9 303 aa21.48■■□□□ 1.03
CSPG5-205ENST00000610462 URB1-AS1Q96HZ7 61 aa21.48■■□□□ 1.03
CSPG5-205ENST00000610462 IGHV4-59P01825 116 aa21.47■■□□□ 1.03
CSPG5-205ENST00000610462 TDRG1Q3Y452 100 aa21.47■■□□□ 1.03
CSPG5-205ENST00000610462 C20orf144Q9BQM9 153 aa21.47■■□□□ 1.03
CSPG5-205ENST00000610462 ANKRD17O75179 2603 aaKnown RBP21.47■■□□□ 1.03
CSPG5-205ENST00000610462 KRTAP10-9P60411 292 aa21.46■■□□□ 1.03
CSPG5-205ENST00000610462 CLEC5AQ9NY25 188 aa21.46■■□□□ 1.03
CSPG5-205ENST00000610462 RNF223E7ERA6 249 aa21.46■■□□□ 1.03
CSPG5-205ENST00000610462 Q8N976 141 aa21.46■■□□□ 1.03
CSPG5-205ENST00000610462 VAMP8Q9BV40 100 aa21.46■■□□□ 1.03
CSPG5-205ENST00000610462 FABP5P3A8MUU1 101 aa21.45■■□□□ 1.02
CSPG5-205ENST00000610462 ZNF493Q6ZR52 646 aa21.45■■□□□ 1.02
CSPG5-205ENST00000610462 AGPAT4-IT1Q9H0P7 198 aa21.45■■□□□ 1.02
CSPG5-205ENST00000610462 BEX4Q9NWD9 120 aaPredicted RBP21.45■■□□□ 1.02
CSPG5-205ENST00000610462 M0R2Z0 102 aa21.44■■□□□ 1.02
CSPG5-205ENST00000610462 SMAD7O15105 426 aaKnown RBP21.44■■□□□ 1.02
CSPG5-205ENST00000610462 C3orf79P0CE67 100 aa21.44■■□□□ 1.02
CSPG5-205ENST00000610462 LCNL1Q6ZST4 164 aa21.44■■□□□ 1.02
CSPG5-205ENST00000610462 CHCHD1Q96BP2 118 aaKnown RBP21.44■■□□□ 1.02
CSPG5-205ENST00000610462 SNHG12Q9BXW3 62 aa21.44■■□□□ 1.02
CSPG5-205ENST00000610462 FAM208BQ5VWN6 2430 aa21.44■■□□□ 1.02
CSPG5-205ENST00000610462 IL17RELQ6ZVW7 336 aa21.43■■□□□ 1.02
CSPG5-205ENST00000610462 C16orf92Q96LL3 132 aa21.43■■□□□ 1.02
CSPG5-205ENST00000610462 PAM16Q9Y3D7 125 aa21.43■■□□□ 1.02
CSPG5-205ENST00000610462 FBN2P35556 2912 aa21.43■■□□□ 1.02
CSPG5-205ENST00000610462 SSTP61278 116 aa21.43■■□□□ 1.02
CSPG5-205ENST00000610462 C9orf139Q6ZV77 190 aa21.43■■□□□ 1.02
CSPG5-205ENST00000610462 NPFFR1Q9GZQ6 430 aa21.43■■□□□ 1.02
CSPG5-205ENST00000610462 CTRLP40313 264 aa21.42■■□□□ 1.02
CSPG5-205ENST00000610462 TMEM78Q5T7P6 136 aa21.42■■□□□ 1.02
CSPG5-205ENST00000610462 CR1P17927 2039 aa21.42■■□□□ 1.02
CSPG5-205ENST00000610462 IGLC6P0CF74 106 aa21.41■■□□□ 1.02
CSPG5-205ENST00000610462 IGHV4-31P0DP07 118 aa21.41■■□□□ 1.02
CSPG5-205ENST00000610462 ZNF138P52744 262 aa21.41■■□□□ 1.02
CSPG5-205ENST00000610462 DEFB113Q30KQ7 82 aa21.41■■□□□ 1.02
CSPG5-205ENST00000610462 C9orf47Q6ZRZ4 202 aa21.41■■□□□ 1.02
CSPG5-205ENST00000610462 ZNF575Q86XF7 245 aa21.41■■□□□ 1.02
CSPG5-205ENST00000610462 FER1L6-AS1Q8NA97 138 aa21.41■■□□□ 1.02
CSPG5-205ENST00000610462 M0QZ24 198 aa21.41■■□□□ 1.02
CSPG5-205ENST00000610462 M0R143 59 aa21.41■■□□□ 1.02
CSPG5-205ENST00000610462 LRRC75A-AS1Q8N1F1 130 aa21.41■■□□□ 1.02
CSPG5-205ENST00000610462 FSHBP01225 129 aa21.4■■□□□ 1.02
CSPG5-205ENST00000610462 ORM1P02763 201 aa21.4■■□□□ 1.02
CSPG5-205ENST00000610462 TMEM95Q3KNT9 176 aa21.4■■□□□ 1.02
CSPG5-205ENST00000610462 TMEM213A2RRL7 107 aa21.4■■□□□ 1.02
CSPG5-205ENST00000610462 FAM181BA6NEQ2 426 aa21.4■■□□□ 1.02
CSPG5-205ENST00000610462 LINC00614P0C842 121 aa21.4■■□□□ 1.02
CSPG5-205ENST00000610462 RAB4AP20338 218 aa21.4■■□□□ 1.02
CSPG5-205ENST00000610462 DMRTA1Q5VZB9 504 aa21.4■■□□□ 1.02
CSPG5-205ENST00000610462 ZNF705AQ6ZN79 300 aaPredicted RBP21.4■■□□□ 1.02
CSPG5-205ENST00000610462 PSMG3-AS1Q96PY0 264 aa21.4■■□□□ 1.02
CSPG5-205ENST00000610462 MIEN1Q9BRT3 115 aa21.4■■□□□ 1.02
CSPG5-205ENST00000610462 LINC01559Q495D7 138 aa21.39■■□□□ 1.01
CSPG5-205ENST00000610462 PPP1R14DQ9NXH3 145 aa21.39■■□□□ 1.01
CSPG5-205ENST00000610462 CSPG4Q6UVK1 2322 aa21.39■■□□□ 1.01
CSPG5-205ENST00000610462 MAP1AP78559 2803 aaPredicted RBP21.38■■□□□ 1.01
CSPG5-205ENST00000610462 GPHB5Q86YW7 130 aa21.38■■□□□ 1.01
CSPG5-205ENST00000610462 PSMB8P28062 276 aa21.37■■□□□ 1.01
CSPG5-205ENST00000610462 NUTF2P61970 127 aaKnown RBP21.37■■□□□ 1.01
CSPG5-205ENST00000610462 HIST1H1AQ02539 215 aaPredicted RBP21.37■■□□□ 1.01
CSPG5-205ENST00000610462 C20orf173Q96LM9 149 aa21.37■■□□□ 1.01
CSPG5-205ENST00000610462 LRRK2Q5S007 2527 aa21.37■■□□□ 1.01
CSPG5-205ENST00000610462 Q5PR19 223 aa21.36■■□□□ 1.01
CSPG5-205ENST00000610462 PEF1Q9UBV8 284 aaKnown RBP21.36■■□□□ 1.01
CSPG5-205ENST00000610462 FAM104BQ5XKR9 115 aa21.36■■□□□ 1.01
CSPG5-205ENST00000610462 IGHV7-4-1A0A0J9YVY3 117 aa21.35■■□□□ 1.01
CSPG5-205ENST00000610462 SOCS3O14543 225 aa21.35■■□□□ 1.01
CSPG5-205ENST00000610462 CYB5R2Q6BCY4 276 aa21.35■■□□□ 1.01
CSPG5-205ENST00000610462 EBLN2Q6P2I7 272 aa21.35■■□□□ 1.01
CSPG5-205ENST00000610462 IGHV1-24A0A0C4DH33 117 aa21.35■■□□□ 1.01
CSPG5-205ENST00000610462 TMEM89A2RUT3 159 aa21.35■■□□□ 1.01
CSPG5-205ENST00000610462 MRPL52Q86TS9 123 aaKnown RBP21.35■■□□□ 1.01
CSPG5-205ENST00000610462 ZNF738Q8NE65 137 aa21.35■■□□□ 1.01
CSPG5-205ENST00000610462 MUC21A0A0G2JKD1 596 aa21.34■■□□□ 1.01
CSPG5-205ENST00000610462 MUC21A0A140T8X8 626 aa21.34■■□□□ 1.01
CSPG5-205ENST00000610462 MUC21Q5SSG8 566 aa21.34■■□□□ 1.01
CSPG5-205ENST00000610462 VPREB3Q9UKI3 123 aa21.34■■□□□ 1.01
CSPG5-205ENST00000610462 C2orf70A6NJV1 201 aa21.33■■□□□ 1.01
CSPG5-205ENST00000610462 TWIST1Q15672 202 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms