RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 IGHV3-7P01780 117 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 PMP2P02689 132 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 CD3DP04234 171 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 IL7P13232 177 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 AKR1C2P52895 323 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 C10orf91Q5T1B1 145 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 MRPL54Q6P161 138 aaKnown RBP2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 LINC00299Q6ZSB3 139 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 MIR17HGQ75NE6 70 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 HIST3H2BBQ8N257 126 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 BPIFB6Q8NFQ5 453 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 CMTM2Q8TAZ6 248 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 HIST1H2BLQ99880 126 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 NPCDR1Q9BY65 106 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 BCL2L10Q9HD36 194 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 SLC39A9Q9NUM3 307 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 FKBP11Q9NYL4 201 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 EPDR1Q9UM22 224 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 RPL26L1Q9UNX3 145 aaKnown RBP2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 MYH13Q9UKX3 1938 aa2.03□□□□□ -2.08
SMCHD1-213ENST00000609587 C17orf51A8MQB3 221 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 MCRIP1C9JLW8 97 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 E7EQL1 145 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 G3V3Q6 166 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 IGKV1D-33P01593 117 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 IGKV1-33P01594 117 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 RBP4P02753 201 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 MT-ND6P03923 174 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 MT-ATP8P03928 68 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 TRGV3P03979 118 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 HLA-DMBP28068 263 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 TDRG1Q3Y452 100 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 ASB16-AS1Q495Z4 193 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 C9orf153Q5TBE3 101 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 DYNAPQ8N1N2 210 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 CNEP1R1Q8N9A8 125 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 SMCR5Q8TEV8 140 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 AQP10Q96PS8 301 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 TTTY13Q9BZ97 58 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 NPVFQ9HCQ7 196 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 SAR1AQ9NR31 198 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 OSTCQ9NRP0 149 aa2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 TXNL4BQ9NX01 149 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-213ENST00000609587 MCM3APO60318 1980 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 ABCC5O15440 1437 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 PARP14Q460N5 1801 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 SBF2Q86WG5 1849 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 ZNF407Q9C0G0 2248 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 ARAP2Q8WZ64 1704 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 IGHV3-15A0A0B4J1V0 119 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 MUC21A0A0G2JKD1 596 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 C19orf71A6NCJ1 209 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 APOC4-APOC2K7ER74 178 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 CPSF4O95639 269 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 NPYP01303 97 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 IGHV3-53P01767 116 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 APOC2P02655 101 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 GYPBP06028 91 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 FUSP35637 526 aaKnown RBP eCLIP2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 KRTAP25-1Q3LHN0 102 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 LGALSLQ3ZCW2 172 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 SOSTDC1Q6X4U4 206 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 SIGLECL1Q8N7X8 197 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 MUC7Q8TAX7 377 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 COPS9Q8WXC6 57 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 FGF13Q92913 245 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 MRPS24Q96EL2 167 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 VAMP8Q9BV40 100 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 TMEM106BQ9NUM4 274 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 PTPRBP23467 1997 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 ANAPC1Q9H1A4 1944 aa2.01□□□□□ -2.09
SMCHD1-213ENST00000609587 ROBO1Q9Y6N7 1651 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 TMEM131LA2VDJ0 1609 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 CC2D2AQ9P2K1 1620 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 H3BMM0 161 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 SH2D1AO60880 128 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 NDUFB6O95139 128 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 IGHV1-69P01742 117 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 LINC00032P0C843 101 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 FXYD7P58549 80 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 DYNLT1P63172 113 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 MIAQ16674 131 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 OR2T2Q6IF00 324 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 HCP5Q6MZN7 132 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 SDIM1Q6ZPB5 146 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 SVBPQ8N300 66 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 RPRMLQ8N4K4 120 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 ATP6V0E2Q8NHE4 81 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 UBE2WQ96B02 151 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 SCGB3A1Q96QR1 104 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 OR5V1Q9UGF6 321 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 NOP16Q9Y3C1 178 aaKnown RBP2□□□□□ -2.09
SMCHD1-213ENST00000609587 ABCA10Q8WWZ4 1543 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 KIF20BQ96Q89 1820 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 PXDNQ92626 1479 aa2□□□□□ -2.09
SMCHD1-213ENST00000609587 HELZP42694 1942 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 MYO9BQ13459 2157 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 LTBP4Q8N2S1 1624 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 DIP2BQ9P265 1576 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 TRBV24-1A0A075B6N3 115 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms