RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 C8orf4Q9NR00 106 aa4.97□□□□□ -1.61
LINC01396-201ENST00000609099 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.97□□□□□ -1.61
LINC01396-201ENST00000609099 Q9UF83 564 aa4.97□□□□□ -1.61
LINC01396-201ENST00000609099 TRAV4A0A0B4J268 109 aa4.96□□□□□ -1.62
LINC01396-201ENST00000609099 USP17L23D6RBM5 183 aa4.96□□□□□ -1.62
LINC01396-201ENST00000609099 SMIM18P0DKX4 95 aa4.96□□□□□ -1.62
LINC01396-201ENST00000609099 RND3P61587 244 aa4.96□□□□□ -1.62
LINC01396-201ENST00000609099 RAB31Q13636 194 aa4.96□□□□□ -1.62
LINC01396-201ENST00000609099 GPR107Q5VW38 600 aa4.96□□□□□ -1.62
LINC01396-201ENST00000609099 C22orf42Q6IC83 251 aa4.96□□□□□ -1.62
LINC01396-201ENST00000609099 LGI3Q8N145 548 aa4.96□□□□□ -1.62
LINC01396-201ENST00000609099 CCDC71LQ8N9Z2 235 aa4.96□□□□□ -1.62
LINC01396-201ENST00000609099 OR52I2Q8NH67 350 aa4.96□□□□□ -1.62
LINC01396-201ENST00000609099 RASL10AQ92737 203 aa4.96□□□□□ -1.62
LINC01396-201ENST00000609099 LINC00477Q96M19 166 aa4.96□□□□□ -1.62
LINC01396-201ENST00000609099 SHANK2-AS3Q9BTD1 123 aa4.96□□□□□ -1.62
LINC01396-201ENST00000609099 IFT46Q9NQC8 304 aa4.96□□□□□ -1.62
LINC01396-201ENST00000609099 ZNF331Q9NQX6 463 aaPredicted RBP4.96□□□□□ -1.62
LINC01396-201ENST00000609099 CACFD1Q9UGQ2 172 aa4.96□□□□□ -1.62
LINC01396-201ENST00000609099 KLK12Q9UKR0 248 aa4.96□□□□□ -1.62
LINC01396-201ENST00000609099 RNF24Q9Y225 148 aa4.96□□□□□ -1.62
LINC01396-201ENST00000609099 U3KQ87 197 aa4.96□□□□□ -1.62
LINC01396-201ENST00000609099 IGHV3-16A0A0C4DH30 117 aa4.95□□□□□ -1.62
LINC01396-201ENST00000609099 PTGES3LE9PB15 166 aa4.95□□□□□ -1.62
LINC01396-201ENST00000609099 LINC00694P0DN24 101 aa4.95□□□□□ -1.62
LINC01396-201ENST00000609099 GATA1P15976 413 aaPredicted RBP4.95□□□□□ -1.62
LINC01396-201ENST00000609099 CXCL2P19875 107 aa4.95□□□□□ -1.62
LINC01396-201ENST00000609099 ANXA7P20073 488 aaKnown RBP4.95□□□□□ -1.62
LINC01396-201ENST00000609099 HLA-DMAP28067 261 aa4.95□□□□□ -1.62
LINC01396-201ENST00000609099 RNASE4P34096 147 aaKnown RBP4.95□□□□□ -1.62
LINC01396-201ENST00000609099 RAP2BP61225 183 aa4.95□□□□□ -1.62
LINC01396-201ENST00000609099 ERCC8Q13216 396 aa4.95□□□□□ -1.62
LINC01396-201ENST00000609099 GUK1Q16774 197 aa4.95□□□□□ -1.62
LINC01396-201ENST00000609099 ATRAIDQ6UW56 229 aa4.95□□□□□ -1.62
LINC01396-201ENST00000609099 PATE2Q6UY27 113 aa4.95□□□□□ -1.62
LINC01396-201ENST00000609099 Q6ZRP5 223 aa4.95□□□□□ -1.62
LINC01396-201ENST00000609099 OR4D10Q8NGI6 311 aa4.95□□□□□ -1.62
LINC01396-201ENST00000609099 SPACA4Q8TDM5 124 aa4.95□□□□□ -1.62
LINC01396-201ENST00000609099 MGLLQ99685 303 aa4.95□□□□□ -1.62
LINC01396-201ENST00000609099 SLC50A1Q9BRV3 221 aa4.95□□□□□ -1.62
LINC01396-201ENST00000609099 SPXQ9BT56 116 aa4.95□□□□□ -1.62
LINC01396-201ENST00000609099 ACOT13Q9NPJ3 140 aa4.95□□□□□ -1.62
LINC01396-201ENST00000609099 A0A087WWC5 75 aa4.94□□□□□ -1.62
LINC01396-201ENST00000609099 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.94□□□□□ -1.62
LINC01396-201ENST00000609099 PGPA6NDG6 321 aa4.94□□□□□ -1.62
LINC01396-201ENST00000609099 SLPIP03973 132 aa4.94□□□□□ -1.62
LINC01396-201ENST00000609099 GPX1P07203 203 aa4.94□□□□□ -1.62
LINC01396-201ENST00000609099 UCP3P55916 312 aa4.94□□□□□ -1.62
LINC01396-201ENST00000609099 RHOHQ15669 191 aa4.94□□□□□ -1.62
LINC01396-201ENST00000609099 TMEM183BQ1AE95 376 aa4.94□□□□□ -1.62
LINC01396-201ENST00000609099 LCN15Q6UWW0 184 aa4.94□□□□□ -1.62
LINC01396-201ENST00000609099 LHFPL1Q86WI0 220 aa4.94□□□□□ -1.62
LINC01396-201ENST00000609099 TMEM183AQ8IXX5 376 aa4.94□□□□□ -1.62
LINC01396-201ENST00000609099 ZFAND2AQ8N6M9 145 aa4.94□□□□□ -1.62
LINC01396-201ENST00000609099 CLRN3Q8NCR9 226 aa4.94□□□□□ -1.62
LINC01396-201ENST00000609099 LYPD6BQ8NI32 183 aa4.94□□□□□ -1.62
LINC01396-201ENST00000609099 PRR13Q9NZ81 148 aa4.94□□□□□ -1.62
LINC01396-201ENST00000609099 FLGP20930 4061 aaPredicted RBP4.93□□□□□ -1.62
LINC01396-201ENST00000609099 A0A087WX48 190 aa4.93□□□□□ -1.62
LINC01396-201ENST00000609099 TRDV1A0A1B0GX56 115 aa4.93□□□□□ -1.62
LINC01396-201ENST00000609099 PMS2P5A8MQ11 134 aa4.93□□□□□ -1.62
LINC01396-201ENST00000609099 IFNA7P01567 189 aa4.93□□□□□ -1.62
LINC01396-201ENST00000609099 MYL9P24844 172 aa4.93□□□□□ -1.62
LINC01396-201ENST00000609099 ATP5IP56385 69 aaPredicted RBP4.93□□□□□ -1.62
LINC01396-201ENST00000609099 PIGPP57054 158 aa4.93□□□□□ -1.62
LINC01396-201ENST00000609099 TAS2R46P59540 309 aa4.93□□□□□ -1.62
LINC01396-201ENST00000609099 TSPAN5P62079 268 aa4.93□□□□□ -1.62
LINC01396-201ENST00000609099 POLR2GP62487 172 aaKnown RBP eCLIP4.93□□□□□ -1.62
LINC01396-201ENST00000609099 OPCMLQ14982 345 aa4.93□□□□□ -1.62
LINC01396-201ENST00000609099 KRTAP26-1Q6PEX3 210 aa4.93□□□□□ -1.62
LINC01396-201ENST00000609099 NIT1Q86X76 327 aa4.93□□□□□ -1.62
LINC01396-201ENST00000609099 PRR26Q8N8Z3 221 aa4.93□□□□□ -1.62
LINC01396-201ENST00000609099 TMEM75Q8N9X5 138 aa4.93□□□□□ -1.62
LINC01396-201ENST00000609099 OR1S1Q8NH92 325 aa4.93□□□□□ -1.62
LINC01396-201ENST00000609099 TRIM63Q969Q1 353 aa4.93□□□□□ -1.62
LINC01396-201ENST00000609099 DUSP21Q9H596 190 aa4.93□□□□□ -1.62
LINC01396-201ENST00000609099 S100A14Q9HCY8 104 aa4.93□□□□□ -1.62
LINC01396-201ENST00000609099 AP5S1Q9NUS5 200 aa4.93□□□□□ -1.62
LINC01396-201ENST00000609099 NDUFB11Q9NX14 153 aa4.93□□□□□ -1.62
LINC01396-201ENST00000609099 SYNE2Q8WXH0 6885 aaKnown RBP4.92□□□□□ -1.62
LINC01396-201ENST00000609099 C3orf85A0A1B0GTC6 90 aa4.92□□□□□ -1.62
LINC01396-201ENST00000609099 H3BQ15 152 aa4.92□□□□□ -1.62
LINC01396-201ENST00000609099 CIDEAO60543 219 aa4.92□□□□□ -1.62
LINC01396-201ENST00000609099 TNFAIP8O95379 198 aa4.92□□□□□ -1.62
LINC01396-201ENST00000609099 HLA-DQA1P01909 254 aa4.92□□□□□ -1.62
LINC01396-201ENST00000609099 CNBPP62633 177 aaKnown RBP4.92□□□□□ -1.62
LINC01396-201ENST00000609099 SELENOHQ8IZQ5 122 aaKnown RBP4.92□□□□□ -1.62
LINC01396-201ENST00000609099 C8orf59Q8N0T1 100 aaPredicted RBP4.92□□□□□ -1.62
LINC01396-201ENST00000609099 SLC25A29Q8N8R3 303 aa4.92□□□□□ -1.62
LINC01396-201ENST00000609099 GLYATL2Q8WU03 294 aa4.92□□□□□ -1.62
LINC01396-201ENST00000609099 SAT2Q96F10 170 aaPredicted RBP4.92□□□□□ -1.62
LINC01396-201ENST00000609099 KRTAP4-1Q9BYQ7 146 aa4.92□□□□□ -1.62
LINC01396-201ENST00000609099 CDIP1Q9H305 208 aa4.92□□□□□ -1.62
LINC01396-201ENST00000609099 RBKSQ9H477 322 aa4.92□□□□□ -1.62
LINC01396-201ENST00000609099 HIGD1AQ9Y241 93 aa4.92□□□□□ -1.62
LINC01396-201ENST00000609099 TRAV1-1A0A0B4J248 108 aa4.91□□□□□ -1.62
LINC01396-201ENST00000609099 TRBV6-4A0A1B0GX49 114 aa4.91□□□□□ -1.62
LINC01396-201ENST00000609099 FBLL1A6NHQ2 334 aaKnown RBP4.91□□□□□ -1.62
LINC01396-201ENST00000609099 M0R3E3 92 aa4.91□□□□□ -1.62
LINC01396-201ENST00000609099 HYPMO75409 117 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms