RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 SYNMO15061 1565 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 A0A096LPI6 279 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 KPNA4O00629 521 aaPredicted RBP-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 LYRM1O43325 122 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 MT-ND6P03923 174 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 PPP1R2P41236 205 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 GNG10P50151 68 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 NEDD8Q15843 81 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 VMA21Q3ZAQ7 101 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 PPP1R2P3Q6NXS1 205 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 C10orf99Q6UWK7 81 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 HRCT1Q6UXD1 115 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 Q6ZS92 163 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 DEFB132Q7Z7B7 95 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 TMED4Q7Z7H5 227 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 C10orf111Q8N326 155 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 CLEC2BQ92478 149 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 LINC00208Q96KT6 92 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 OR4C12Q96R67 309 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 BOLA2Q9H3K6 86 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 GID8Q9NWU2 228 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 FKBP11Q9NYL4 201 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 STOML2Q9UJZ1 356 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 JPT1Q9UK76 154 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 TPRKBQ9Y3C4 175 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 NUBP2Q9Y5Y2 271 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 LRP1Q07954 4544 aaKnown RBP-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 SPTBP11277 2137 aa-0.05□□□□□ -2.42
SNORA28-201ENST00000606769 KIAA1549LQ6ZVL6 1849 aa-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 DSPPQ9NZW4 1301 aa-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 MAST4O15021 2626 aa-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 A0A1W2PRE2 83 aa-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 A0A1W2PRS3 328 aa-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 H3BQV1 296 aa-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 S100A11P31949 105 aa-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 RPL37P61927 97 aaKnown RBP-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 BASP1P80723 227 aaKnown RBP-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 QRFPP83859 136 aa-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 FXYD3Q14802 87 aa-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 XAF1Q6GPH4 301 aa-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 IZUMO2Q6UXV1 221 aa-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 IFT20Q8IY31 132 aa-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 FAM24BQ8N5W8 94 aa-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 NEK7Q8TDX7 302 aa-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 EFCAB11Q9BUY7 163 aa-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 MED11Q9P086 117 aa-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 BOKQ9UMX3 212 aaPredicted RBP-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 FGD6Q6ZV73 1430 aa-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 WDR97A6NE52 1622 aa-0.06□□□□□ -2.42
SNORA28-201ENST00000606769 DLC1Q96QB1 1528 aa-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 C3orf85A0A1B0GTC6 90 aa-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 LOC101927531A0A1B0GV80 90 aa-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 PPP5D1E7EU14 171 aa-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 TRACP01848 142 aa-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 FABP2P12104 132 aa-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 RPL7P18124 248 aaKnown RBP-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 SERPINB1P30740 379 aa-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 CAV3P56539 151 aa-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 MRPS36P82909 103 aaKnown RBP-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 C3orf33Q6P1S2 294 aa-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 DCUN1D2Q6PH85 259 aa-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 CASC2Q6XLA1 102 aa-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 STX19Q8N4C7 294 aa-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 TEX29Q8N6K0 151 aa-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 C5orf56Q8N8D9 126 aa-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 C5orf17Q8NAS9 161 aa-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 BIN3Q9NQY0 253 aa-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 COMMD3Q9UBI1 195 aa-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 CPDO75976 1380 aa-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 ANK1P16157 1881 aa-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 NUP210Q8TEM1 1887 aaPredicted RBP-0.07□□□□□ -2.42
SNORA28-201ENST00000606769 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 TRBV7-6A0A0J9YX20 115 aa-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 TRBV27A0A0K0K1C4 114 aa-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 MAP1LC3B2A6NCE7 125 aa-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 BCL2P10415 239 aa-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 SLC25A4P12235 298 aa-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 POLR2HP52434 150 aaKnown RBP-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 TCTAP57738 103 aa-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 MAXP61244 160 aa-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 ZNF56Q15929 161 aa-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 MORN4Q8NDC4 146 aa-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 OR4B1Q8NGF8 309 aa-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 OR5H6Q8NGV6 325 aa-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 TSKUQ8WUA8 353 aa-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 DYDC1Q8WWB3 177 aa-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 PRELID3AQ96N28 172 aa-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 MCEEQ96PE7 176 aa-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 CIB3Q96Q77 187 aaPredicted RBP-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 CBLN4Q9NTU7 201 aa-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 SMPXQ9UHP9 88 aa-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 YTHDC2Q9H6S0 1430 aaKnown RBP-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 TANC2Q9HCD6 1990 aa-0.08□□□□□ -2.42
SNORA28-201ENST00000606769 BCORL1Q5H9F3 1711 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 A0A096LNT2 108 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 LOC107984640A0A0U1RRK4 108 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 CDC42EP2O14613 210 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 SULT1C4O75897 302 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 IGF2P01344 180 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms