RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 MRPL32Q9BYC8 188 aaKnown RBP12.79□□□□□ -0.36
CCDC12-213ENST00000605875 KRTAP4-5Q9BYR2 181 aa12.79□□□□□ -0.36
CCDC12-213ENST00000605875 IGKV2-40A0A087WW87 121 aaPredicted RBP12.78□□□□□ -0.36
CCDC12-213ENST00000605875 IGKV2D-40P01614 121 aaPredicted RBP12.78□□□□□ -0.36
CCDC12-213ENST00000605875 OR10J4P0C629 311 aa12.78□□□□□ -0.36
CCDC12-213ENST00000605875 C15orf53Q8NAA6 179 aa12.78□□□□□ -0.36
CCDC12-213ENST00000605875 PHYHIPLQ96FC7 376 aa12.78□□□□□ -0.36
CCDC12-213ENST00000605875 AAMDCQ9H7C9 122 aa12.78□□□□□ -0.36
CCDC12-213ENST00000605875 FUT9Q9Y231 359 aa12.78□□□□□ -0.36
CCDC12-213ENST00000605875 PRELID1Q9Y255 219 aa12.78□□□□□ -0.36
CCDC12-213ENST00000605875 TRAV12-3A0A0B4J271 114 aa12.77□□□□□ -0.37
CCDC12-213ENST00000605875 PTTG1O95997 202 aa12.77□□□□□ -0.37
CCDC12-213ENST00000605875 ICAM4Q14773 271 aa12.77□□□□□ -0.37
CCDC12-213ENST00000605875 FFAR4Q5NUL3 377 aa12.77□□□□□ -0.37
CCDC12-213ENST00000605875 FAM122CQ6P4D5 195 aa12.77□□□□□ -0.37
CCDC12-213ENST00000605875 FXYD5Q96DB9 178 aa12.77□□□□□ -0.37
CCDC12-213ENST00000605875 PAXXQ9BUH6 204 aa12.77□□□□□ -0.37
CCDC12-213ENST00000605875 OR51M1Q9H341 326 aa12.77□□□□□ -0.37
CCDC12-213ENST00000605875 NOP10Q9NPE3 64 aaKnown RBP12.77□□□□□ -0.37
CCDC12-213ENST00000605875 TIMM8BQ9Y5J9 83 aaPredicted RBP12.77□□□□□ -0.37
CCDC12-213ENST00000605875 F5H768 121 aa12.76□□□□□ -0.37
CCDC12-213ENST00000605875 OR7C2O60412 319 aa12.76□□□□□ -0.37
CCDC12-213ENST00000605875 IFNA5P01569 189 aa12.76□□□□□ -0.37
CCDC12-213ENST00000605875 FAM3BP58499 235 aaPredicted RBP12.76□□□□□ -0.37
CCDC12-213ENST00000605875 ZNF493Q6ZR52 646 aa12.76□□□□□ -0.37
CCDC12-213ENST00000605875 ATG101Q9BSB4 218 aa12.76□□□□□ -0.37
CCDC12-213ENST00000605875 NBEAP1P0C6P0 100 aa12.75□□□□□ -0.37
CCDC12-213ENST00000605875 UBE2L3P68036 154 aaKnown RBP12.75□□□□□ -0.37
CCDC12-213ENST00000605875 BTN1A1Q13410 526 aa12.75□□□□□ -0.37
CCDC12-213ENST00000605875 WFDC1Q9HC57 220 aa12.75□□□□□ -0.37
CCDC12-213ENST00000605875 C7orf71A4D174 169 aa12.74□□□□□ -0.37
CCDC12-213ENST00000605875 EIF3GO75821 320 aaKnown RBP eCLIP12.74□□□□□ -0.37
CCDC12-213ENST00000605875 ATP5G1P05496 136 aa12.74□□□□□ -0.37
CCDC12-213ENST00000605875 ATP5G3P48201 142 aa12.74□□□□□ -0.37
CCDC12-213ENST00000605875 CCDC28AQ8IWP9 274 aa12.74□□□□□ -0.37
CCDC12-213ENST00000605875 SCGB1C1Q8TD33 95 aa12.74□□□□□ -0.37
CCDC12-213ENST00000605875 RNF141Q8WVD5 230 aa12.74□□□□□ -0.37
CCDC12-213ENST00000605875 ZNF503Q96F45 646 aa12.74□□□□□ -0.37
CCDC12-213ENST00000605875 AGPAT4-IT1Q9H0P7 198 aa12.74□□□□□ -0.37
CCDC12-213ENST00000605875 HSPG2P98160 4391 aa12.73□□□□□ -0.37
CCDC12-213ENST00000605875 KLLNB2CW77 178 aa12.73□□□□□ -0.37
CCDC12-213ENST00000605875 SLC25A5P05141 298 aaKnown RBP12.73□□□□□ -0.37
CCDC12-213ENST00000605875 TNP2Q05952 138 aa12.73□□□□□ -0.37
CCDC12-213ENST00000605875 FAM19A4Q96LR4 140 aa12.73□□□□□ -0.37
CCDC12-213ENST00000605875 VGLL1Q99990 258 aa12.73□□□□□ -0.37
CCDC12-213ENST00000605875 CBY3A6NI87 242 aa12.72□□□□□ -0.37
CCDC12-213ENST00000605875 SNURFLB1AK76 121 aa12.72□□□□□ -0.37
CCDC12-213ENST00000605875 CD300CQ08708 224 aa12.72□□□□□ -0.37
CCDC12-213ENST00000605875 KHDC3LQ587J8 217 aa12.72□□□□□ -0.37
CCDC12-213ENST00000605875 TMEM78Q5T7P6 136 aa12.72□□□□□ -0.37
CCDC12-213ENST00000605875 PRR9Q5T870 116 aa12.72□□□□□ -0.37
CCDC12-213ENST00000605875 Q8TAT8 98 aa12.72□□□□□ -0.37
CCDC12-213ENST00000605875 LINC00477Q96M19 166 aa12.72□□□□□ -0.37
CCDC12-213ENST00000605875 PYGO2Q9BRQ0 406 aa12.72□□□□□ -0.37
CCDC12-213ENST00000605875 C16orf90A8MZG2 172 aa12.71□□□□□ -0.37
CCDC12-213ENST00000605875 RNASE4P34096 147 aaKnown RBP12.71□□□□□ -0.37
CCDC12-213ENST00000605875 C9orf47Q6ZRZ4 202 aa12.71□□□□□ -0.37
CCDC12-213ENST00000605875 MED28Q9H204 178 aa12.71□□□□□ -0.37
CCDC12-213ENST00000605875 Q9H3A6 140 aa12.71□□□□□ -0.37
CCDC12-213ENST00000605875 NBDYA0A0U1RRE5 68 aa12.7□□□□□ -0.38
CCDC12-213ENST00000605875 GAGE12BA1L429 117 aa12.7□□□□□ -0.38
CCDC12-213ENST00000605875 GAGE7O76087 117 aa12.7□□□□□ -0.38
CCDC12-213ENST00000605875 NUDT3O95989 172 aa12.7□□□□□ -0.38
CCDC12-213ENST00000605875 GAGE12FP0CL80 117 aa12.7□□□□□ -0.38
CCDC12-213ENST00000605875 GAGE12GP0CL81 117 aa12.7□□□□□ -0.38
CCDC12-213ENST00000605875 GAGE12IP0CL82 117 aa12.7□□□□□ -0.38
CCDC12-213ENST00000605875 CRISP2P16562 243 aa12.7□□□□□ -0.38
CCDC12-213ENST00000605875 TAS2R45P59539 299 aa12.7□□□□□ -0.38
CCDC12-213ENST00000605875 RAB2AP61019 212 aa12.7□□□□□ -0.38
CCDC12-213ENST00000605875 ZFAND2AQ8N6M9 145 aa12.7□□□□□ -0.38
CCDC12-213ENST00000605875 LINC00612Q8N6U2 182 aa12.7□□□□□ -0.38
CCDC12-213ENST00000605875 LRP1BQ9NZR2 4599 aa12.69□□□□□ -0.38
CCDC12-213ENST00000605875 GPX1P07203 203 aa12.69□□□□□ -0.38
CCDC12-213ENST00000605875 RANP62826 216 aaKnown RBP12.69□□□□□ -0.38
CCDC12-213ENST00000605875 C6orf223Q8N319 242 aa12.69□□□□□ -0.38
CCDC12-213ENST00000605875 ZNRF2Q8NHG8 242 aa12.69□□□□□ -0.38
CCDC12-213ENST00000605875 ZNF324O75467 553 aaPredicted RBP12.68□□□□□ -0.38
CCDC12-213ENST00000605875 CDK2AP2O75956 126 aa12.68□□□□□ -0.38
CCDC12-213ENST00000605875 CSN1S1P47710 185 aa12.68□□□□□ -0.38
CCDC12-213ENST00000605875 ACOT6Q3I5F7 207 aaPredicted RBP12.68□□□□□ -0.38
CCDC12-213ENST00000605875 C11orf72Q8NBR9 251 aa12.68□□□□□ -0.38
CCDC12-213ENST00000605875 ZNF680Q8NEM1 530 aa12.68□□□□□ -0.38
CCDC12-213ENST00000605875 GSN-AS1Q9NRJ2 163 aa12.68□□□□□ -0.38
CCDC12-213ENST00000605875 ZNF492Q9P255 531 aa12.68□□□□□ -0.38
CCDC12-213ENST00000605875 M6PRP20645 277 aa12.67□□□□□ -0.38
CCDC12-213ENST00000605875 ZNF138P52744 262 aa12.67□□□□□ -0.38
CCDC12-213ENST00000605875 CCL18P55774 89 aa12.67□□□□□ -0.38
CCDC12-213ENST00000605875 Q6ZQT7 251 aa12.67□□□□□ -0.38
CCDC12-213ENST00000605875 Q6ZTI0 123 aa12.67□□□□□ -0.38
CCDC12-213ENST00000605875 EIF4E3Q8N5X7 224 aaKnown RBP12.67□□□□□ -0.38
CCDC12-213ENST00000605875 HSD17B11Q8NBQ5 300 aa12.67□□□□□ -0.38
CCDC12-213ENST00000605875 TMPRSS5Q9H3S3 457 aa12.67□□□□□ -0.38
CCDC12-213ENST00000605875 RPH3ALQ9UNE2 315 aa12.67□□□□□ -0.38
CCDC12-213ENST00000605875 HMGB3O15347 200 aaKnown RBP12.66□□□□□ -0.38
CCDC12-213ENST00000605875 HOXA5P20719 270 aa12.66□□□□□ -0.38
CCDC12-213ENST00000605875 DAZ2Q13117 558 aaKnown RBP12.66□□□□□ -0.38
CCDC12-213ENST00000605875 OR5I1Q13606 314 aa12.66□□□□□ -0.38
CCDC12-213ENST00000605875 LYPD1Q8N2G4 141 aa12.66□□□□□ -0.38
CCDC12-213ENST00000605875 MAPKAPK5-AS1Q8N8E1 139 aa12.66□□□□□ -0.38
CCDC12-213ENST00000605875 HYLS1Q96M11 299 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms