RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 Q6ZVQ6 151 aa4.42□□□□□ -1.7
LSM1P2-201ENST00000604911 LINC00596Q86U02 117 aa4.42□□□□□ -1.7
LSM1P2-201ENST00000604911 NLRC5Q86WI3 1866 aa4.42□□□□□ -1.7
LSM1P2-201ENST00000604911 MKXQ8IYA7 352 aa4.42□□□□□ -1.7
LSM1P2-201ENST00000604911 TMEM75Q8N9X5 138 aa4.42□□□□□ -1.7
LSM1P2-201ENST00000604911 RITA1Q96K30 269 aa4.42□□□□□ -1.7
LSM1P2-201ENST00000604911 PGLYRP4Q96LB8 373 aa4.42□□□□□ -1.7
LSM1P2-201ENST00000604911 SPACA5Q96QH8 159 aa4.42□□□□□ -1.7
LSM1P2-201ENST00000604911 CTSZQ9UBR2 303 aa4.42□□□□□ -1.7
LSM1P2-201ENST00000604911 ANKRD12Q6UB98 2062 aa4.42□□□□□ -1.7
LSM1P2-201ENST00000604911 TRBV20OR9-2A0A075B6H5 130 aa4.41□□□□□ -1.7
LSM1P2-201ENST00000604911 TRBV10-2A0A0K0K1G8 114 aa4.41□□□□□ -1.7
LSM1P2-201ENST00000604911 A0A1B0GWA3 101 aa4.41□□□□□ -1.7
LSM1P2-201ENST00000604911 ZNF883P0CG24 379 aa4.41□□□□□ -1.7
LSM1P2-201ENST00000604911 SLC25A16P16260 332 aa4.41□□□□□ -1.7
LSM1P2-201ENST00000604911 DYNLT3P51808 116 aa4.41□□□□□ -1.7
LSM1P2-201ENST00000604911 ATXN8Q156A1 80 aa4.41□□□□□ -1.7
LSM1P2-201ENST00000604911 C1orf100Q5SVJ3 147 aa4.41□□□□□ -1.7
LSM1P2-201ENST00000604911 ZNF329Q86UD4 541 aa4.41□□□□□ -1.7
LSM1P2-201ENST00000604911 Q8N2B8 174 aa4.41□□□□□ -1.7
LSM1P2-201ENST00000604911 C6orf223Q8N319 242 aa4.41□□□□□ -1.7
LSM1P2-201ENST00000604911 TAF15Q92804 592 aaKnown RBP eCLIP4.41□□□□□ -1.7
LSM1P2-201ENST00000604911 C11orf52Q96A22 123 aa4.41□□□□□ -1.7
LSM1P2-201ENST00000604911 C18orf12Q96KH6 178 aa4.41□□□□□ -1.7
LSM1P2-201ENST00000604911 ARRDC1-AS1Q9H2J1 176 aa4.41□□□□□ -1.7
LSM1P2-201ENST00000604911 ARID2Q68CP9 1835 aa4.41□□□□□ -1.7
LSM1P2-201ENST00000604911 ZNF236Q9UL36 1845 aa4.4□□□□□ -1.7
LSM1P2-201ENST00000604911 TRBV7-3A0A075B6L6 115 aa4.4□□□□□ -1.71
LSM1P2-201ENST00000604911 TRAV8-3A0A0A6YYJ7 113 aa4.4□□□□□ -1.71
LSM1P2-201ENST00000604911 LOC107984156A0A0G2JMH3 177 aa4.4□□□□□ -1.71
LSM1P2-201ENST00000604911 IBA57-AS1B1ANH7 110 aa4.4□□□□□ -1.71
LSM1P2-201ENST00000604911 TMEM256-PLSCR3K7ERE1 68 aa4.4□□□□□ -1.71
LSM1P2-201ENST00000604911 CCKP06307 115 aa4.4□□□□□ -1.71
LSM1P2-201ENST00000604911 CD70P32970 193 aa4.4□□□□□ -1.71
LSM1P2-201ENST00000604911 UBE2D1P51668 147 aa4.4□□□□□ -1.71
LSM1P2-201ENST00000604911 GNB1P62873 340 aa4.4□□□□□ -1.71
LSM1P2-201ENST00000604911 UBE2BP63146 152 aa4.4□□□□□ -1.71
LSM1P2-201ENST00000604911 PAPPA-AS1Q5QFB9 102 aa4.4□□□□□ -1.71
LSM1P2-201ENST00000604911 NDUFA11Q86Y39 141 aa4.4□□□□□ -1.71
LSM1P2-201ENST00000604911 ARL17AQ8IVW1 177 aa4.4□□□□□ -1.71
LSM1P2-201ENST00000604911 RPRMLQ8N4K4 120 aa4.4□□□□□ -1.71
LSM1P2-201ENST00000604911 Q8N8P6 123 aa4.4□□□□□ -1.71
LSM1P2-201ENST00000604911 HIST1H4GQ99525 98 aa4.4□□□□□ -1.71
LSM1P2-201ENST00000604911 PLA2G12AQ9BZM1 189 aa4.4□□□□□ -1.71
LSM1P2-201ENST00000604911 ANKRD36A6QL64 1941 aa4.4□□□□□ -1.71
LSM1P2-201ENST00000604911 PAPPA2Q9BXP8 1791 aa4.4□□□□□ -1.71
LSM1P2-201ENST00000604911 OBSL1O75147 1896 aa4.39□□□□□ -1.71
LSM1P2-201ENST00000604911 COL2A1P02458 1487 aaPredicted RBP4.39□□□□□ -1.71
LSM1P2-201ENST00000604911 A0A0B4J2C4 111 aa4.39□□□□□ -1.71
LSM1P2-201ENST00000604911 A8MUN3 132 aa4.39□□□□□ -1.71
LSM1P2-201ENST00000604911 F5H697 171 aa4.39□□□□□ -1.71
LSM1P2-201ENST00000604911 C16orf97H3BN30 126 aa4.39□□□□□ -1.71
LSM1P2-201ENST00000604911 LST1O00453 97 aa4.39□□□□□ -1.71
LSM1P2-201ENST00000604911 PRYO14603 147 aa4.39□□□□□ -1.71
LSM1P2-201ENST00000604911 TRIAP1O43715 76 aa4.39□□□□□ -1.71
LSM1P2-201ENST00000604911 IFI6P09912 130 aa4.39□□□□□ -1.71
LSM1P2-201ENST00000604911 LMO2P25791 158 aa4.39□□□□□ -1.71
LSM1P2-201ENST00000604911 CKS2P33552 79 aa4.39□□□□□ -1.71
LSM1P2-201ENST00000604911 NUP37Q8NFH4 326 aa4.39□□□□□ -1.71
LSM1P2-201ENST00000604911 TIMM17AQ99595 171 aa4.39□□□□□ -1.71
LSM1P2-201ENST00000604911 CCL13Q99616 98 aa4.39□□□□□ -1.71
LSM1P2-201ENST00000604911 OVOL2Q9BRP0 275 aa4.39□□□□□ -1.71
LSM1P2-201ENST00000604911 SLC50A1Q9BRV3 221 aa4.39□□□□□ -1.71
LSM1P2-201ENST00000604911 Q9H3A6 140 aa4.39□□□□□ -1.71
LSM1P2-201ENST00000604911 LINC00588Q9Y4M8 146 aa4.39□□□□□ -1.71
LSM1P2-201ENST00000604911 SHROOM3Q8TF72 1996 aa4.38□□□□□ -1.71
LSM1P2-201ENST00000604911 TRAV3A0A0B4J244 114 aa4.38□□□□□ -1.71
LSM1P2-201ENST00000604911 A0A1W2PQD3 144 aa4.38□□□□□ -1.71
LSM1P2-201ENST00000604911 H0Y9J4 135 aa4.38□□□□□ -1.71
LSM1P2-201ENST00000604911 M0R381 172 aa4.38□□□□□ -1.71
LSM1P2-201ENST00000604911 PEX7O00628 323 aa4.38□□□□□ -1.71
LSM1P2-201ENST00000604911 RNASE2P10153 161 aaKnown RBP4.38□□□□□ -1.71
LSM1P2-201ENST00000604911 NPPCP23582 126 aa4.38□□□□□ -1.71
LSM1P2-201ENST00000604911 NCBP2P52298 156 aaKnown RBP eCLIP4.38□□□□□ -1.71
LSM1P2-201ENST00000604911 CACNG7P62955 275 aa4.38□□□□□ -1.71
LSM1P2-201ENST00000604911 CXCL6P80162 114 aa4.38□□□□□ -1.71
LSM1P2-201ENST00000604911 C9orf57Q5W0N0 161 aa4.38□□□□□ -1.71
LSM1P2-201ENST00000604911 CD177Q8N6Q3 437 aa4.38□□□□□ -1.71
LSM1P2-201ENST00000604911 SPTSSAQ969W0 71 aa4.38□□□□□ -1.71
LSM1P2-201ENST00000604911 FXYD5Q96DB9 178 aa4.38□□□□□ -1.71
LSM1P2-201ENST00000604911 URB1-AS1Q96HZ7 61 aa4.38□□□□□ -1.71
LSM1P2-201ENST00000604911 ZNF414Q96IQ9 312 aa4.38□□□□□ -1.71
LSM1P2-201ENST00000604911 C6orf106Q9H6K1 298 aaPredicted RBP4.38□□□□□ -1.71
LSM1P2-201ENST00000604911 TAS2R4Q9NYW5 299 aa4.38□□□□□ -1.71
LSM1P2-201ENST00000604911 DOCK9Q9BZ29 2069 aa4.37□□□□□ -1.71
LSM1P2-201ENST00000604911 TMSB15BA0A087X1C1 80 aa4.37□□□□□ -1.71
LSM1P2-201ENST00000604911 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.37□□□□□ -1.71
LSM1P2-201ENST00000604911 IGHV3OR16-9A0A0B4J2B5 98 aa4.37□□□□□ -1.71
LSM1P2-201ENST00000604911 NXPH3O95157 252 aa4.37□□□□□ -1.71
LSM1P2-201ENST00000604911 MP68P56378 58 aa4.37□□□□□ -1.71
LSM1P2-201ENST00000604911 SUMO2P61956 95 aaKnown RBP4.37□□□□□ -1.71
LSM1P2-201ENST00000604911 RIGQ13278 110 aa4.37□□□□□ -1.71
LSM1P2-201ENST00000604911 SS18Q15532 418 aa4.37□□□□□ -1.71
LSM1P2-201ENST00000604911 ZNF876PQ49A33 203 aa4.37□□□□□ -1.71
LSM1P2-201ENST00000604911 LINC00173Q6ZV60 143 aa4.37□□□□□ -1.71
LSM1P2-201ENST00000604911 CYSTM1Q9H1C7 97 aa4.37□□□□□ -1.71
LSM1P2-201ENST00000604911 Q9HAA7 133 aa4.37□□□□□ -1.71
LSM1P2-201ENST00000604911 RAI1Q7Z5J4 1906 aaPredicted RBP4.36□□□□□ -1.71
LSM1P2-201ENST00000604911 NHSQ6T4R5 1651 aa4.36□□□□□ -1.71
LSM1P2-201ENST00000604911 RBMY1BA6NDE4 496 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms