RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 ORM1P02763 201 aa11.86□□□□□ -0.51
LYSMD4-211ENST00000604213 GATA1P15976 413 aaPredicted RBP11.86□□□□□ -0.51
LYSMD4-211ENST00000604213 TMEM158Q8WZ71 300 aa11.86□□□□□ -0.51
LYSMD4-211ENST00000604213 NHP2Q9NX24 153 aaKnown RBP11.86□□□□□ -0.51
LYSMD4-211ENST00000604213 SMPXQ9UHP9 88 aa11.86□□□□□ -0.51
LYSMD4-211ENST00000604213 E9PLD3 99 aa11.85□□□□□ -0.51
LYSMD4-211ENST00000604213 HLA-DRB4P13762 266 aa11.85□□□□□ -0.51
LYSMD4-211ENST00000604213 LINC01559Q495D7 138 aa11.85□□□□□ -0.51
LYSMD4-211ENST00000604213 HLA-DRB4X5D2U9 266 aa11.85□□□□□ -0.51
LYSMD4-211ENST00000604213 TMEM8BA6NDV4 472 aa11.85□□□□□ -0.51
LYSMD4-211ENST00000604213 LYNX1G3V0Z9 82 aa11.85□□□□□ -0.51
LYSMD4-211ENST00000604213 ATP5LO75964 103 aa11.85□□□□□ -0.51
LYSMD4-211ENST00000604213 LYNX1P0DP58 116 aa11.85□□□□□ -0.51
LYSMD4-211ENST00000604213 SRSF1Q07955 248 aaKnown RBP eCLIP11.85□□□□□ -0.51
LYSMD4-211ENST00000604213 ZC2HC1BQ5TFG8 222 aa11.85□□□□□ -0.51
LYSMD4-211ENST00000604213 IGFBPL1Q8WX77 278 aa11.85□□□□□ -0.51
LYSMD4-211ENST00000604213 CUL9Q8IWT3 2517 aa11.84□□□□□ -0.51
LYSMD4-211ENST00000604213 IGLV2-18A0A075B6J9 118 aa11.84□□□□□ -0.51
LYSMD4-211ENST00000604213 NPBQ8NG41 125 aa11.84□□□□□ -0.51
LYSMD4-211ENST00000604213 FABP5P3A8MUU1 101 aa11.84□□□□□ -0.51
LYSMD4-211ENST00000604213 IGLL5B9A064 214 aa11.84□□□□□ -0.51
LYSMD4-211ENST00000604213 K7EMI3 77 aa11.84□□□□□ -0.51
LYSMD4-211ENST00000604213 NDUFA3O95167 84 aa11.84□□□□□ -0.51
LYSMD4-211ENST00000604213 MAPKAPK5-AS1Q8N8E1 139 aa11.84□□□□□ -0.51
LYSMD4-211ENST00000604213 Q8N8P6 123 aa11.84□□□□□ -0.51
LYSMD4-211ENST00000604213 CFHR4Q92496 578 aa11.84□□□□□ -0.51
LYSMD4-211ENST00000604213 CEP250Q9BV73 2442 aa11.83□□□□□ -0.52
LYSMD4-211ENST00000604213 AZU1P20160 251 aa11.83□□□□□ -0.52
LYSMD4-211ENST00000604213 SPANXB1Q9NS25 103 aaPredicted RBP11.83□□□□□ -0.52
LYSMD4-211ENST00000604213 C21orf62Q9NYP8 219 aa11.83□□□□□ -0.52
LYSMD4-211ENST00000604213 GOSR1O95249 250 aa11.83□□□□□ -0.52
LYSMD4-211ENST00000604213 IGHV3-23P01764 117 aa11.83□□□□□ -0.52
LYSMD4-211ENST00000604213 PPIFP30405 207 aaKnown RBP11.83□□□□□ -0.52
LYSMD4-211ENST00000604213 WFDC2Q14508 124 aa11.83□□□□□ -0.52
LYSMD4-211ENST00000604213 FOXI2Q6ZQN5 318 aa11.83□□□□□ -0.52
LYSMD4-211ENST00000604213 DTX2Q86UW9 622 aa11.83□□□□□ -0.52
LYSMD4-211ENST00000604213 GTSF1LQ9H1H1 148 aa11.83□□□□□ -0.52
LYSMD4-211ENST00000604213 TRAV40A0A0B4J280 105 aa11.82□□□□□ -0.52
LYSMD4-211ENST00000604213 SCGB1A1P11684 91 aa11.82□□□□□ -0.52
LYSMD4-211ENST00000604213 ERCC8Q13216 396 aa11.82□□□□□ -0.52
LYSMD4-211ENST00000604213 DYNAPQ8N1N2 210 aa11.82□□□□□ -0.52
LYSMD4-211ENST00000604213 SIGMAR1Q99720 223 aa11.82□□□□□ -0.52
LYSMD4-211ENST00000604213 TMEM160Q9NX00 188 aa11.82□□□□□ -0.52
LYSMD4-211ENST00000604213 F8W1H4 67 aa11.82□□□□□ -0.52
LYSMD4-211ENST00000604213 TMEM11P17152 192 aa11.82□□□□□ -0.52
LYSMD4-211ENST00000604213 C5orf64Q2M2E5 130 aa11.82□□□□□ -0.52
LYSMD4-211ENST00000604213 MRPL35Q9NZE8 188 aaKnown RBP11.82□□□□□ -0.52
LYSMD4-211ENST00000604213 ONECUT1Q9UBC0 465 aa11.82□□□□□ -0.52
LYSMD4-211ENST00000604213 ADGRG4Q8IZF6 3080 aa11.81□□□□□ -0.52
LYSMD4-211ENST00000604213 TSSC4Q9Y5U2 329 aaPredicted RBP11.81□□□□□ -0.52
LYSMD4-211ENST00000604213 PRAC2D3DTV9 90 aa11.81□□□□□ -0.52
LYSMD4-211ENST00000604213 TAL2Q16559 108 aa11.81□□□□□ -0.52
LYSMD4-211ENST00000604213 CD300EQ496F6 205 aaPredicted RBP11.81□□□□□ -0.52
LYSMD4-211ENST00000604213 CLEC2AQ6UVW9 174 aa11.81□□□□□ -0.52
LYSMD4-211ENST00000604213 TTC9CQ8N5M4 171 aa11.81□□□□□ -0.52
LYSMD4-211ENST00000604213 DPM3Q9P2X0 92 aa11.81□□□□□ -0.52
LYSMD4-211ENST00000604213 PRRG2O14669 202 aa11.8□□□□□ -0.52
LYSMD4-211ENST00000604213 CTSGP08311 255 aa11.8□□□□□ -0.52
LYSMD4-211ENST00000604213 NDPQ00604 133 aa11.8□□□□□ -0.52
LYSMD4-211ENST00000604213 C12orf74Q32Q52 190 aa11.8□□□□□ -0.52
LYSMD4-211ENST00000604213 IGF2-ASQ6U949 168 aa11.8□□□□□ -0.52
LYSMD4-211ENST00000604213 ZNF479Q96JC4 524 aa11.8□□□□□ -0.52
LYSMD4-211ENST00000604213 TACC2O95359 2948 aa11.8□□□□□ -0.52
LYSMD4-211ENST00000604213 GAGE12HA6NDE8 117 aa11.79□□□□□ -0.52
LYSMD4-211ENST00000604213 ZNF672Q499Z4 452 aaPredicted RBP11.79□□□□□ -0.52
LYSMD4-211ENST00000604213 ARPC1AQ92747 370 aa11.79□□□□□ -0.52
LYSMD4-211ENST00000604213 TRGV3P03979 118 aa11.79□□□□□ -0.52
LYSMD4-211ENST00000604213 DEFB123Q8N688 67 aa11.79□□□□□ -0.52
LYSMD4-211ENST00000604213 NRACQ8N912 160 aa11.79□□□□□ -0.52
LYSMD4-211ENST00000604213 SH3BGRL2Q9UJC5 107 aa11.79□□□□□ -0.52
LYSMD4-211ENST00000604213 BDP1A6H8Y1 2624 aa11.79□□□□□ -0.52
LYSMD4-211ENST00000604213 MGAQ8IWI9 3026 aa11.79□□□□□ -0.52
LYSMD4-211ENST00000604213 ZNF318Q5VUA4 2279 aa11.79□□□□□ -0.52
LYSMD4-211ENST00000604213 IGKV3D-20A0A0C4DH25 116 aa11.78□□□□□ -0.52
LYSMD4-211ENST00000604213 B9A039 149 aa11.78□□□□□ -0.52
LYSMD4-211ENST00000604213 SMAGPQ0VAQ4 97 aa11.78□□□□□ -0.52
LYSMD4-211ENST00000604213 IL17RELQ6ZVW7 336 aa11.78□□□□□ -0.52
LYSMD4-211ENST00000604213 LY6G5BQ8NDX9 201 aa11.78□□□□□ -0.52
LYSMD4-211ENST00000604213 OR11H6Q8NGC7 330 aa11.78□□□□□ -0.52
LYSMD4-211ENST00000604213 MYOZ3Q8TDC0 251 aa11.78□□□□□ -0.52
LYSMD4-211ENST00000604213 C11orf21Q9P2W6 132 aa11.78□□□□□ -0.52
LYSMD4-211ENST00000604213 LAMA5O15230 3695 aa11.78□□□□□ -0.52
LYSMD4-211ENST00000604213 PCNX1Q96RV3 2341 aa11.78□□□□□ -0.52
LYSMD4-211ENST00000604213 IGHV3OR16-8A0A075B7F1 116 aa11.78□□□□□ -0.52
LYSMD4-211ENST00000604213 A0A087WX48 190 aa11.78□□□□□ -0.52
LYSMD4-211ENST00000604213 PRSS47A8MTI9 375 aa11.78□□□□□ -0.52
LYSMD4-211ENST00000604213 H3BMG7 143 aa11.78□□□□□ -0.52
LYSMD4-211ENST00000604213 ZNF207O43670 478 aaKnown RBP11.78□□□□□ -0.52
LYSMD4-211ENST00000604213 HES1Q14469 280 aa11.78□□□□□ -0.52
LYSMD4-211ENST00000604213 LAGE3Q14657 143 aa11.78□□□□□ -0.52
LYSMD4-211ENST00000604213 MAP1BP46821 2468 aaKnown RBP11.78□□□□□ -0.52
LYSMD4-211ENST00000604213 SH2D6Q7Z4S9 175 aa11.77□□□□□ -0.52
LYSMD4-211ENST00000604213 SPAG8Q99932 426 aaPredicted RBP11.77□□□□□ -0.53
LYSMD4-211ENST00000604213 TPRP12270 2363 aaKnown RBP11.77□□□□□ -0.53
LYSMD4-211ENST00000604213 J3QR89 54 aa11.76□□□□□ -0.53
LYSMD4-211ENST00000604213 KLRD1Q13241 179 aa11.76□□□□□ -0.53
LYSMD4-211ENST00000604213 RNF182Q8N6D2 247 aa11.76□□□□□ -0.53
LYSMD4-211ENST00000604213 SPATA25Q9BR10 227 aa11.76□□□□□ -0.53
LYSMD4-211ENST00000604213 PRO0461Q9UI25 63 aa11.76□□□□□ -0.53
LYSMD4-211ENST00000604213 TRBV7-3A0A075B6L6 115 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms