RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 DLEU1O43261 78 aa11.54□□□□□ -0.56
CDCA3-211ENST00000603043 RBMY1DP0C7P1 496 aaKnown RBP11.54□□□□□ -0.56
CDCA3-211ENST00000603043 G0S2P27469 103 aa11.54□□□□□ -0.56
CDCA3-211ENST00000603043 PSMB3P49720 205 aa11.54□□□□□ -0.56
CDCA3-211ENST00000603043 C21orf62-AS1Q17RA5 79 aa11.54□□□□□ -0.56
CDCA3-211ENST00000603043 C16orf92Q96LL3 132 aa11.54□□□□□ -0.56
CDCA3-211ENST00000603043 MRPL32Q9BYC8 188 aaKnown RBP11.54□□□□□ -0.56
CDCA3-211ENST00000603043 TGP01266 2768 aa11.54□□□□□ -0.56
CDCA3-211ENST00000603043 ZNF25P17030 456 aaPredicted RBP11.53□□□□□ -0.56
CDCA3-211ENST00000603043 PNRC1Q12796 327 aaPredicted RBP11.53□□□□□ -0.56
CDCA3-211ENST00000603043 ACOT6Q3I5F7 207 aaPredicted RBP11.53□□□□□ -0.56
CDCA3-211ENST00000603043 SPATA31B1PQ5VZV4 182 aa11.53□□□□□ -0.56
CDCA3-211ENST00000603043 LINC00322Q6ZN03 302 aaPredicted RBP11.53□□□□□ -0.56
CDCA3-211ENST00000603043 MIR17HGQ75NE6 70 aa11.53□□□□□ -0.56
CDCA3-211ENST00000603043 OR10G4Q8NGN3 311 aa11.53□□□□□ -0.56
CDCA3-211ENST00000603043 FAM213BQ8TBF2 198 aa11.53□□□□□ -0.56
CDCA3-211ENST00000603043 SH3BGRL3Q9H299 93 aa11.53□□□□□ -0.56
CDCA3-211ENST00000603043 FUT9Q9Y231 359 aa11.53□□□□□ -0.56
CDCA3-211ENST00000603043 TRBV24-1A0A075B6N3 115 aa11.52□□□□□ -0.56
CDCA3-211ENST00000603043 COA6Q5JTJ3 125 aaKnown RBP11.52□□□□□ -0.56
CDCA3-211ENST00000603043 ZNF506Q5JVG8 444 aa11.52□□□□□ -0.56
CDCA3-211ENST00000603043 SBSPONQ8IVN8 264 aa11.52□□□□□ -0.56
CDCA3-211ENST00000603043 OR2G3Q8NGZ4 309 aa11.52□□□□□ -0.56
CDCA3-211ENST00000603043 GNPNAT1Q96EK6 184 aaPredicted RBP11.52□□□□□ -0.56
CDCA3-211ENST00000603043 ASCL2Q99929 193 aa11.52□□□□□ -0.56
CDCA3-211ENST00000603043 SNHG12Q9BXW3 62 aa11.52□□□□□ -0.56
CDCA3-211ENST00000603043 LOC102724200A0A096LPH7 203 aaPredicted RBP11.52□□□□□ -0.57
CDCA3-211ENST00000603043 IGLC2P0DOY2 106 aa11.52□□□□□ -0.57
CDCA3-211ENST00000603043 RHOBP62745 196 aa11.52□□□□□ -0.57
CDCA3-211ENST00000603043 RARRES2Q99969 163 aa11.52□□□□□ -0.57
CDCA3-211ENST00000603043 SLC25A2Q9BXI2 301 aa11.52□□□□□ -0.57
CDCA3-211ENST00000603043 AMBPP02760 352 aa11.51□□□□□ -0.57
CDCA3-211ENST00000603043 FHITP49789 147 aa11.51□□□□□ -0.57
CDCA3-211ENST00000603043 ERVFC1-1P60608 527 aa11.51□□□□□ -0.57
CDCA3-211ENST00000603043 SERF2P84101 59 aa11.51□□□□□ -0.57
CDCA3-211ENST00000603043 LCN15Q6UWW0 184 aa11.51□□□□□ -0.57
CDCA3-211ENST00000603043 TMEM14CQ9P0S9 112 aa11.51□□□□□ -0.57
CDCA3-211ENST00000603043 URGCP-MRPS24S4R325 110 aa11.51□□□□□ -0.57
CDCA3-211ENST00000603043 COL7A1Q02388 2944 aa11.51□□□□□ -0.57
CDCA3-211ENST00000603043 HAGHQ16775 308 aa11.5□□□□□ -0.57
CDCA3-211ENST00000603043 OR10G9Q8NGN4 311 aa11.5□□□□□ -0.57
CDCA3-211ENST00000603043 OR10G7Q8NGN6 311 aa11.5□□□□□ -0.57
CDCA3-211ENST00000603043 FAM167A-AS1Q96KT0 104 aa11.5□□□□□ -0.57
CDCA3-211ENST00000603043 VAX2Q9UIW0 290 aa11.5□□□□□ -0.57
CDCA3-211ENST00000603043 A0A1W2PPV4 95 aa11.5□□□□□ -0.57
CDCA3-211ENST00000603043 HBE1P02100 147 aa11.5□□□□□ -0.57
CDCA3-211ENST00000603043 PYYP10082 97 aa11.5□□□□□ -0.57
CDCA3-211ENST00000603043 RPL35AP18077 110 aaKnown RBP11.5□□□□□ -0.57
CDCA3-211ENST00000603043 IQCJQ1A5X6 159 aa11.5□□□□□ -0.57
CDCA3-211ENST00000603043 ACTL10Q5JWF8 245 aa11.5□□□□□ -0.57
CDCA3-211ENST00000603043 STHQ8IWL8 128 aa11.5□□□□□ -0.57
CDCA3-211ENST00000603043 ATG101Q9BSB4 218 aa11.5□□□□□ -0.57
CDCA3-211ENST00000603043 CTDSP1Q9GZU7 261 aa11.5□□□□□ -0.57
CDCA3-211ENST00000603043 TRAV8-2A0A0B4J237 113 aa11.49□□□□□ -0.57
CDCA3-211ENST00000603043 KNCNA6PVL3 124 aa11.49□□□□□ -0.57
CDCA3-211ENST00000603043 H3BTX0 84 aa11.49□□□□□ -0.57
CDCA3-211ENST00000603043 IGFL4Q6B9Z1 124 aa11.49□□□□□ -0.57
CDCA3-211ENST00000603043 RNF182Q8N6D2 247 aa11.49□□□□□ -0.57
CDCA3-211ENST00000603043 C20orf173Q96LM9 149 aa11.49□□□□□ -0.57
CDCA3-211ENST00000603043 SLC50A1Q9BRV3 221 aa11.49□□□□□ -0.57
CDCA3-211ENST00000603043 ZNF586Q9NXT0 402 aa11.49□□□□□ -0.57
CDCA3-211ENST00000603043 TAS2R45P59539 299 aa11.48□□□□□ -0.57
CDCA3-211ENST00000603043 ICAM4Q14773 271 aa11.48□□□□□ -0.57
CDCA3-211ENST00000603043 DPPA3Q6W0C5 159 aa11.48□□□□□ -0.57
CDCA3-211ENST00000603043 TMEM208Q9BTX3 173 aa11.48□□□□□ -0.57
CDCA3-211ENST00000603043 ZNF331Q9NQX6 463 aaPredicted RBP11.48□□□□□ -0.57
CDCA3-211ENST00000603043 RPRMQ9NS64 109 aa11.48□□□□□ -0.57
CDCA3-211ENST00000603043 ZNF705GA8MUZ8 300 aaPredicted RBP11.48□□□□□ -0.57
CDCA3-211ENST00000603043 SLC17A3O00476 420 aa11.48□□□□□ -0.57
CDCA3-211ENST00000603043 OR7C2O60412 319 aa11.48□□□□□ -0.57
CDCA3-211ENST00000603043 HIST1H1EP10412 219 aaKnown RBP11.48□□□□□ -0.57
CDCA3-211ENST00000603043 APOC4P55056 127 aa11.48□□□□□ -0.57
CDCA3-211ENST00000603043 COTL1Q14019 142 aa11.48□□□□□ -0.57
CDCA3-211ENST00000603043 PAXXQ9BUH6 204 aa11.48□□□□□ -0.57
CDCA3-211ENST00000603043 NHLRC4P0CG21 123 aaPredicted RBP11.47□□□□□ -0.57
CDCA3-211ENST00000603043 DEFB1P60022 68 aa11.47□□□□□ -0.57
CDCA3-211ENST00000603043 TMEM41BQ5BJD5 291 aa11.47□□□□□ -0.57
CDCA3-211ENST00000603043 CYB561D1Q8N8Q1 229 aa11.47□□□□□ -0.57
CDCA3-211ENST00000603043 TMEM18Q96B42 140 aa11.47□□□□□ -0.57
CDCA3-211ENST00000603043 NBEAL2Q6ZNJ1 2754 aa11.47□□□□□ -0.57
CDCA3-211ENST00000603043 DNAH9Q9NYC9 4486 aa11.47□□□□□ -0.57
CDCA3-211ENST00000603043 TRBV19A0A075B6N1 114 aa11.47□□□□□ -0.57
CDCA3-211ENST00000603043 KIR2DL5BA0A0G2JN68 375 aa11.47□□□□□ -0.57
CDCA3-211ENST00000603043 KIR2DL5BA0A0G2JPC4 375 aa11.47□□□□□ -0.57
CDCA3-211ENST00000603043 ZNF253O75346 499 aa11.47□□□□□ -0.57
CDCA3-211ENST00000603043 OR10J4P0C629 311 aa11.47□□□□□ -0.57
CDCA3-211ENST00000603043 CDC34P49427 236 aaPredicted RBP11.47□□□□□ -0.57
CDCA3-211ENST00000603043 GDF5OSQ5U4N7 250 aa11.47□□□□□ -0.57
CDCA3-211ENST00000603043 FOXI2Q6ZQN5 318 aa11.47□□□□□ -0.57
CDCA3-211ENST00000603043 TRPT1Q86TN4 253 aaKnown RBP11.47□□□□□ -0.57
CDCA3-211ENST00000603043 KIR2DL5AQ8N109 375 aa11.47□□□□□ -0.57
CDCA3-211ENST00000603043 RPP25LQ8N5L8 163 aaKnown RBP11.47□□□□□ -0.57
CDCA3-211ENST00000603043 KIR2DL5BQ8NHK3 375 aa11.47□□□□□ -0.57
CDCA3-211ENST00000603043 BLNKQ8WV28 456 aa11.47□□□□□ -0.57
CDCA3-211ENST00000603043 HLA-DRB4P13762 266 aa11.46□□□□□ -0.58
CDCA3-211ENST00000603043 HLA-DMBP28068 263 aa11.46□□□□□ -0.58
CDCA3-211ENST00000603043 PDE6HQ13956 83 aa11.46□□□□□ -0.58
CDCA3-211ENST00000603043 ZNF738Q8NE65 137 aa11.46□□□□□ -0.58
CDCA3-211ENST00000603043 ZNF503Q96F45 646 aa11.46□□□□□ -0.58
CDCA3-211ENST00000603043 TM2D3Q9BRN9 247 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms