RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 FAM19A4Q96LR4 140 aa10.47□□□□□ -0.73
SHKBP1-226ENST00000600791 SLC25A2Q9BXI2 301 aa10.47□□□□□ -0.73
SHKBP1-226ENST00000600791 OR5AC2Q9NZP5 309 aa10.47□□□□□ -0.73
SHKBP1-226ENST00000600791 PRELID1Q9Y255 219 aa10.47□□□□□ -0.73
SHKBP1-226ENST00000600791 A0A0J9YY99 117 aa10.46□□□□□ -0.73
SHKBP1-226ENST00000600791 KLLNB2CW77 178 aa10.46□□□□□ -0.73
SHKBP1-226ENST00000600791 E5RGE8 158 aa10.46□□□□□ -0.73
SHKBP1-226ENST00000600791 IFITM3Q01628 133 aa10.46□□□□□ -0.73
SHKBP1-226ENST00000600791 DAZ2Q13117 558 aaKnown RBP10.46□□□□□ -0.73
SHKBP1-226ENST00000600791 BTN1A1Q13410 526 aa10.46□□□□□ -0.73
SHKBP1-226ENST00000600791 Q6ZTI0 123 aa10.46□□□□□ -0.73
SHKBP1-226ENST00000600791 MIR17HGQ75NE6 70 aa10.46□□□□□ -0.73
SHKBP1-226ENST00000600791 SSX7Q7RTT5 188 aa10.46□□□□□ -0.73
SHKBP1-226ENST00000600791 ZNF575Q86XF7 245 aa10.46□□□□□ -0.73
SHKBP1-226ENST00000600791 FAM167A-AS1Q96KT0 104 aa10.46□□□□□ -0.73
SHKBP1-226ENST00000600791 NMES1Q9C002 83 aa10.46□□□□□ -0.73
SHKBP1-226ENST00000600791 SLC25A31Q9H0C2 315 aa10.46□□□□□ -0.73
SHKBP1-226ENST00000600791 AGPAT4-IT1Q9H0P7 198 aa10.46□□□□□ -0.73
SHKBP1-226ENST00000600791 AAMDCQ9H7C9 122 aa10.46□□□□□ -0.73
SHKBP1-226ENST00000600791 H0YIZ8 118 aa10.45□□□□□ -0.74
SHKBP1-226ENST00000600791 ZNF324O75467 553 aaPredicted RBP10.45□□□□□ -0.74
SHKBP1-226ENST00000600791 TNP2Q05952 138 aa10.45□□□□□ -0.74
SHKBP1-226ENST00000600791 CD300CQ08708 224 aa10.45□□□□□ -0.74
SHKBP1-226ENST00000600791 ICAM4Q14773 271 aa10.45□□□□□ -0.74
SHKBP1-226ENST00000600791 C6orf223Q8N319 242 aa10.45□□□□□ -0.74
SHKBP1-226ENST00000600791 C11orf72Q8NBR9 251 aa10.45□□□□□ -0.74
SHKBP1-226ENST00000600791 RXFP4Q8TDU9 374 aa10.45□□□□□ -0.74
SHKBP1-226ENST00000600791 ZNF503Q96F45 646 aa10.45□□□□□ -0.74
SHKBP1-226ENST00000600791 LINC00477Q96M19 166 aa10.45□□□□□ -0.74
SHKBP1-226ENST00000600791 TMPRSS5Q9H3S3 457 aa10.45□□□□□ -0.74
SHKBP1-226ENST00000600791 MUC4Q99102 2169 aa10.44□□□□□ -0.74
SHKBP1-226ENST00000600791 IGKV2-40A0A087WW87 121 aaPredicted RBP10.44□□□□□ -0.74
SHKBP1-226ENST00000600791 PRAF2O60831 178 aa10.44□□□□□ -0.74
SHKBP1-226ENST00000600791 IGKV2D-40P01614 121 aaPredicted RBP10.44□□□□□ -0.74
SHKBP1-226ENST00000600791 CRISP2P16562 243 aa10.44□□□□□ -0.74
SHKBP1-226ENST00000600791 FAM122CQ6P4D5 195 aa10.44□□□□□ -0.74
SHKBP1-226ENST00000600791 C9orf47Q6ZRZ4 202 aa10.44□□□□□ -0.74
SHKBP1-226ENST00000600791 ZNF680Q8NEM1 530 aa10.44□□□□□ -0.74
SHKBP1-226ENST00000600791 LINC00467Q9BRT7 94 aa10.44□□□□□ -0.74
SHKBP1-226ENST00000600791 WDR61Q9GZS3 305 aaKnown RBP10.44□□□□□ -0.74
SHKBP1-226ENST00000600791 GSN-AS1Q9NRJ2 163 aa10.44□□□□□ -0.74
SHKBP1-226ENST00000600791 KCNIP2Q9NS61 270 aa10.44□□□□□ -0.74
SHKBP1-226ENST00000600791 INMT-MINDY4F8WBC2 141 aa10.43□□□□□ -0.74
SHKBP1-226ENST00000600791 NBEAP1P0C6P0 100 aa10.43□□□□□ -0.74
SHKBP1-226ENST00000600791 RNASE4P34096 147 aaKnown RBP10.43□□□□□ -0.74
SHKBP1-226ENST00000600791 H2BFSP57053 126 aa10.43□□□□□ -0.74
SHKBP1-226ENST00000600791 ANXA2RQ3ZCQ2 193 aa10.43□□□□□ -0.74
SHKBP1-226ENST00000600791 FXYD5Q96DB9 178 aa10.43□□□□□ -0.74
SHKBP1-226ENST00000600791 MRPL32Q9BYC8 188 aaKnown RBP10.43□□□□□ -0.74
SHKBP1-226ENST00000600791 OR51M1Q9H341 326 aa10.43□□□□□ -0.74
SHKBP1-226ENST00000600791 ABCA13Q86UQ4 5058 aa10.42□□□□□ -0.74
SHKBP1-226ENST00000600791 LRP1BQ9NZR2 4599 aa10.42□□□□□ -0.74
SHKBP1-226ENST00000600791 H3BNG1 76 aa10.42□□□□□ -0.74
SHKBP1-226ENST00000600791 GPX1P07203 203 aa10.42□□□□□ -0.74
SHKBP1-226ENST00000600791 OR10J4P0C629 311 aa10.42□□□□□ -0.74
SHKBP1-226ENST00000600791 CYCSP99999 105 aaKnown RBP10.42□□□□□ -0.74
SHKBP1-226ENST00000600791 TMEM78Q5T7P6 136 aa10.42□□□□□ -0.74
SHKBP1-226ENST00000600791 PRR9Q5T870 116 aa10.42□□□□□ -0.74
SHKBP1-226ENST00000600791 EIF4E3Q8N5X7 224 aaKnown RBP10.42□□□□□ -0.74
SHKBP1-226ENST00000600791 ZFAND2AQ8N6M9 145 aa10.42□□□□□ -0.74
SHKBP1-226ENST00000600791 PPP1R1CQ8WVI7 109 aa10.42□□□□□ -0.74
SHKBP1-226ENST00000600791 PHYHIPLQ96FC7 376 aa10.42□□□□□ -0.74
SHKBP1-226ENST00000600791 C18orf15Q96N68 181 aa10.42□□□□□ -0.74
SHKBP1-226ENST00000600791 VGLL1Q99990 258 aa10.42□□□□□ -0.74
SHKBP1-226ENST00000600791 PAXXQ9BUH6 204 aa10.42□□□□□ -0.74
SHKBP1-226ENST00000600791 Q9H8V8 135 aa10.42□□□□□ -0.74
SHKBP1-226ENST00000600791 FUT9Q9Y231 359 aa10.42□□□□□ -0.74
SHKBP1-226ENST00000600791 TRGV2A0A075B6R0 118 aa10.41□□□□□ -0.74
SHKBP1-226ENST00000600791 NMBP08949 121 aa10.41□□□□□ -0.74
SHKBP1-226ENST00000600791 Q6ZQT7 251 aa10.41□□□□□ -0.74
SHKBP1-226ENST00000600791 MARVELD1Q9BSK0 173 aa10.41□□□□□ -0.74
SHKBP1-226ENST00000600791 UPK3BQ9BT76 320 aa10.41□□□□□ -0.74
SHKBP1-226ENST00000600791 KRTAP1-5Q9BYS1 174 aa10.41□□□□□ -0.74
SHKBP1-226ENST00000600791 PTTG2Q9NZH5 202 aa10.41□□□□□ -0.74
SHKBP1-226ENST00000600791 ZNF492Q9P255 531 aa10.41□□□□□ -0.74
SHKBP1-226ENST00000600791 KLF12Q9Y4X4 402 aa10.41□□□□□ -0.74
SHKBP1-226ENST00000600791 HSPG2P98160 4391 aa10.4□□□□□ -0.74
SHKBP1-226ENST00000600791 TRGV1A0A0A0MS02 117 aa10.4□□□□□ -0.74
SHKBP1-226ENST00000600791 C17orf112F2Z3M2 114 aa10.4□□□□□ -0.74
SHKBP1-226ENST00000600791 OR7C2O60412 319 aa10.4□□□□□ -0.74
SHKBP1-226ENST00000600791 TCL1AP56279 114 aa10.4□□□□□ -0.74
SHKBP1-226ENST00000600791 ESRGQ1W209 222 aa10.4□□□□□ -0.74
SHKBP1-226ENST00000600791 Q8TAT8 98 aa10.4□□□□□ -0.74
SHKBP1-226ENST00000600791 VSIG2Q96IQ7 327 aa10.4□□□□□ -0.74
SHKBP1-226ENST00000600791 ATP5SQ99766 215 aa10.4□□□□□ -0.74
SHKBP1-226ENST00000600791 TP53TG3Q9ULZ0 132 aa10.4□□□□□ -0.74
SHKBP1-226ENST00000600791 RGS13O14921 159 aa10.39□□□□□ -0.75
SHKBP1-226ENST00000600791 SPINK4O60575 86 aa10.39□□□□□ -0.75
SHKBP1-226ENST00000600791 TTC32Q5I0X7 151 aa10.39□□□□□ -0.75
SHKBP1-226ENST00000600791 IBA57Q5T440 356 aaKnown RBP10.39□□□□□ -0.75
SHKBP1-226ENST00000600791 Q9H3A6 140 aa10.39□□□□□ -0.75
SHKBP1-226ENST00000600791 MRPS16Q9Y3D3 137 aaKnown RBP10.39□□□□□ -0.75
SHKBP1-226ENST00000600791 HSPB11Q9Y547 144 aa10.39□□□□□ -0.75
SHKBP1-226ENST00000600791 IGHV1OR15-1A0A075B7D0 117 aa10.38□□□□□ -0.75
SHKBP1-226ENST00000600791 A0A096LPF7 62 aa10.38□□□□□ -0.75
SHKBP1-226ENST00000600791 SSNA1O43805 119 aa10.38□□□□□ -0.75
SHKBP1-226ENST00000600791 MPC2O95563 127 aa10.38□□□□□ -0.75
SHKBP1-226ENST00000600791 PET100P0DJ07 73 aa10.38□□□□□ -0.75
SHKBP1-226ENST00000600791 ZNF138P52744 262 aa10.38□□□□□ -0.75
SHKBP1-226ENST00000600791 UBE2L3P68036 154 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms