RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 CBLN1P23435 193 aa15.25■□□□□ 0.03
PNKP-214ENST00000600573 HOXD3P31249 432 aaPredicted RBP15.25■□□□□ 0.03
PNKP-214ENST00000600573 C16orf92Q96LL3 132 aa15.25■□□□□ 0.03
PNKP-214ENST00000600573 NRN1Q9NPD7 142 aa15.25■□□□□ 0.03
PNKP-214ENST00000600573 CT45A10P0DMU9 189 aa15.24■□□□□ 0.03
PNKP-214ENST00000600573 HLA-DMBP28068 263 aa15.24■□□□□ 0.03
PNKP-214ENST00000600573 TCTEX1D4Q5JR98 221 aa15.24■□□□□ 0.03
PNKP-214ENST00000600573 RASL11AQ6T310 242 aa15.24■□□□□ 0.03
PNKP-214ENST00000600573 OR1N2Q8NGR9 330 aa15.24■□□□□ 0.03
PNKP-214ENST00000600573 SNURFLB1AK76 121 aa15.23■□□□□ 0.03
PNKP-214ENST00000600573 M0QZ24 198 aa15.23■□□□□ 0.03
PNKP-214ENST00000600573 NEU1Q99519 415 aa15.23■□□□□ 0.03
PNKP-214ENST00000600573 GFRA4Q9GZZ7 299 aa15.23■□□□□ 0.03
PNKP-214ENST00000600573 MRPL18Q9H0U6 180 aaKnown RBP15.23■□□□□ 0.03
PNKP-214ENST00000600573 PEMTQ9UBM1 199 aa15.23■□□□□ 0.03
PNKP-214ENST00000600573 HIVEP2P31629 2446 aa15.23■□□□□ 0.03
PNKP-214ENST00000600573 TMEM213A2RRL7 107 aa15.22■□□□□ 0.03
PNKP-214ENST00000600573 INAFM1C9JVW0 142 aa15.22■□□□□ 0.03
PNKP-214ENST00000600573 IGFL4Q6B9Z1 124 aa15.22■□□□□ 0.03
PNKP-214ENST00000600573 MRPL54Q6P161 138 aaKnown RBP15.22■□□□□ 0.03
PNKP-214ENST00000600573 COX8CQ7Z4L0 72 aa15.22■□□□□ 0.03
PNKP-214ENST00000600573 ACANP16112 2415 aa15.22■□□□□ 0.03
PNKP-214ENST00000600573 TRAV8-2A0A0B4J237 113 aa15.21■□□□□ 0.03
PNKP-214ENST00000600573 XKRY2A2RUG3 117 aa15.21■□□□□ 0.03
PNKP-214ENST00000600573 SPINK4O60575 86 aa15.21■□□□□ 0.03
PNKP-214ENST00000600573 SYNJ2BPP57105 145 aa15.21■□□□□ 0.03
PNKP-214ENST00000600573 COA6Q5JTJ3 125 aaKnown RBP15.21■□□□□ 0.03
PNKP-214ENST00000600573 Q71RC1 249 aaPredicted RBP15.21■□□□□ 0.03
PNKP-214ENST00000600573 ATP5L2Q7Z4Y8 100 aa15.21■□□□□ 0.03
PNKP-214ENST00000600573 NUP35Q8NFH5 326 aa15.21■□□□□ 0.03
PNKP-214ENST00000600573 OR11H1Q8NG94 326 aa15.21■□□□□ 0.03
PNKP-214ENST00000600573 NDFIP1Q9BT67 221 aa15.21■□□□□ 0.03
PNKP-214ENST00000600573 TSSC4Q9Y5U2 329 aaPredicted RBP15.21■□□□□ 0.03
PNKP-214ENST00000600573 FAM231BA6NCW3 169 aa15.21■□□□□ 0.02
PNKP-214ENST00000600573 HIGD1CA8MV81 97 aa15.21■□□□□ 0.02
PNKP-214ENST00000600573 CRLF1O75462 422 aa15.21■□□□□ 0.02
PNKP-214ENST00000600573 HLA-DQA1P01909 254 aa15.21■□□□□ 0.02
PNKP-214ENST00000600573 SONP18583 2426 aaKnown RBP15.21■□□□□ 0.02
PNKP-214ENST00000600573 KHDC1LQ5JSQ8 128 aa15.21■□□□□ 0.02
PNKP-214ENST00000600573 TMEM136Q6ZRR5 245 aa15.21■□□□□ 0.02
PNKP-214ENST00000600573 HIST3H2BBQ8N257 126 aa15.21■□□□□ 0.02
PNKP-214ENST00000600573 RNF182Q8N6D2 247 aa15.21■□□□□ 0.02
PNKP-214ENST00000600573 KLHL30-AS1Q8NEE0 82 aa15.21■□□□□ 0.02
PNKP-214ENST00000600573 OR2D3Q8NGH3 330 aa15.21■□□□□ 0.02
PNKP-214ENST00000600573 ZNF705FA8MVS1 300 aaPredicted RBP15.2■□□□□ 0.02
PNKP-214ENST00000600573 PRB4P10163 310 aaPredicted RBP15.2■□□□□ 0.02
PNKP-214ENST00000600573 ID1P41134 155 aa15.2■□□□□ 0.02
PNKP-214ENST00000600573 RPL11P62913 178 aaKnown RBP15.2■□□□□ 0.02
PNKP-214ENST00000600573 TCF24Q7RTU0 167 aa15.2■□□□□ 0.02
PNKP-214ENST00000600573 C8orf49Q96NF6 230 aa15.2■□□□□ 0.02
PNKP-214ENST00000600573 PPP1R14DQ9NXH3 145 aa15.2■□□□□ 0.02
PNKP-214ENST00000600573 SOCS3O14543 225 aa15.19■□□□□ 0.02
PNKP-214ENST00000600573 OVOL1O14753 267 aa15.19■□□□□ 0.02
PNKP-214ENST00000600573 LINC00518Q8N0U6 118 aa15.19■□□□□ 0.02
PNKP-214ENST00000600573 PRR25Q96S07 402 aa15.19■□□□□ 0.02
PNKP-214ENST00000600573 VGLL1Q99990 258 aa15.19■□□□□ 0.02
PNKP-214ENST00000600573 RNF114Q9Y508 228 aa15.19■□□□□ 0.02
PNKP-214ENST00000600573 A0A1B0GUS0 222 aa15.18■□□□□ 0.02
PNKP-214ENST00000600573 C2orf70A6NJV1 201 aa15.18■□□□□ 0.02
PNKP-214ENST00000600573 RAB4BP61018 213 aa15.18■□□□□ 0.02
PNKP-214ENST00000600573 RBPMS2Q6ZRY4 209 aaKnown RBP15.18■□□□□ 0.02
PNKP-214ENST00000600573 ASCL2Q99929 193 aa15.18■□□□□ 0.02
PNKP-214ENST00000600573 FRMD6-AS1P0C7T7 363 aa15.17■□□□□ 0.02
PNKP-214ENST00000600573 S100A2P29034 98 aa15.17■□□□□ 0.02
PNKP-214ENST00000600573 FAM162BQ5T6X4 162 aa15.17■□□□□ 0.02
PNKP-214ENST00000600573 Q8TAT8 98 aa15.17■□□□□ 0.02
PNKP-214ENST00000600573 PRAC2D3DTV9 90 aa15.17■□□□□ 0.02
PNKP-214ENST00000600573 GFI1BQ5VTD9 330 aa15.17■□□□□ 0.02
PNKP-214ENST00000600573 C9orf47Q6ZRZ4 202 aa15.17■□□□□ 0.02
PNKP-214ENST00000600573 A0A1B0GXF2 115 aa15.16■□□□□ 0.02
PNKP-214ENST00000600573 IFITM10A6NMD0 228 aa15.16■□□□□ 0.02
PNKP-214ENST00000600573 SH2D1AO60880 128 aa15.16■□□□□ 0.02
PNKP-214ENST00000600573 SMIM6P0DI80 62 aa15.16■□□□□ 0.02
PNKP-214ENST00000600573 CD28P10747 220 aa15.16■□□□□ 0.02
PNKP-214ENST00000600573 GTSF1Q8WW33 167 aa15.16■□□□□ 0.02
PNKP-214ENST00000600573 LENEPQ9Y5L5 61 aa15.16■□□□□ 0.02
PNKP-214ENST00000600573 CRIP1P50238 77 aa15.15■□□□□ 0.02
PNKP-214ENST00000600573 PROK1P58294 105 aa15.15■□□□□ 0.02
PNKP-214ENST00000600573 PAFAH1B2P68402 229 aa15.15■□□□□ 0.02
PNKP-214ENST00000600573 TMEM78Q5T7P6 136 aa15.15■□□□□ 0.02
PNKP-214ENST00000600573 Q6AWC8 147 aa15.15■□□□□ 0.02
PNKP-214ENST00000600573 C18orf65Q6ZTR6 163 aa15.15■□□□□ 0.02
PNKP-214ENST00000600573 OR9G4Q8NGQ1 327 aa15.15■□□□□ 0.02
PNKP-214ENST00000600573 LINC00477Q96M19 166 aa15.15■□□□□ 0.02
PNKP-214ENST00000600573 GPR61Q9BZJ8 451 aa15.15■□□□□ 0.02
PNKP-214ENST00000600573 SLURP1P55000 103 aa15.14■□□□□ 0.01
PNKP-214ENST00000600573 HBBP68871 147 aa15.14■□□□□ 0.01
PNKP-214ENST00000600573 ERCC8Q13216 396 aa15.14■□□□□ 0.01
PNKP-214ENST00000600573 FHL3Q13643 280 aa15.14■□□□□ 0.01
PNKP-214ENST00000600573 PDZD11Q5EBL8 140 aa15.14■□□□□ 0.01
PNKP-214ENST00000600573 ZNF738Q8NE65 137 aa15.14■□□□□ 0.01
PNKP-214ENST00000600573 PGLYRP4Q96LB8 373 aa15.14■□□□□ 0.01
PNKP-214ENST00000600573 ZNF138P52744 262 aa15.14■□□□□ 0.01
PNKP-214ENST00000600573 DEFB136Q30KP8 78 aa15.14■□□□□ 0.01
PNKP-214ENST00000600573 OR10J6PQ8NGY7 276 aa15.14■□□□□ 0.01
PNKP-214ENST00000600573 TRAV2A0A0B4J234 112 aa15.13■□□□□ 0.01
PNKP-214ENST00000600573 HAX1O00165 279 aa15.13■□□□□ 0.01
PNKP-214ENST00000600573 APCSP02743 223 aa15.13■□□□□ 0.01
PNKP-214ENST00000600573 CRISP2P16562 243 aa15.13■□□□□ 0.01
PNKP-214ENST00000600573 FOXA3P55318 350 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms