RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 TMEM189A5PLL7 270 aa9.98□□□□□ -0.81
SNRPA-208ENST00000600456 IGKV2D-40P01614 121 aaPredicted RBP9.98□□□□□ -0.81
SNRPA-208ENST00000600456 HBE1P02100 147 aa9.98□□□□□ -0.81
SNRPA-208ENST00000600456 NMBP08949 121 aa9.98□□□□□ -0.81
SNRPA-208ENST00000600456 TRAV12-2A0A075B6T6 113 aa9.97□□□□□ -0.81
SNRPA-208ENST00000600456 MAP1LC3B2A6NCE7 125 aa9.97□□□□□ -0.81
SNRPA-208ENST00000600456 DIRC3C9JPN6 131 aa9.97□□□□□ -0.81
SNRPA-208ENST00000600456 RBMY1A1P0DJD3 496 aaKnown RBP9.97□□□□□ -0.81
SNRPA-208ENST00000600456 RBMY1CP0DJD4 496 aa9.97□□□□□ -0.81
SNRPA-208ENST00000600456 ZNF138P52744 262 aa9.97□□□□□ -0.81
SNRPA-208ENST00000600456 CD300CQ08708 224 aa9.97□□□□□ -0.81
SNRPA-208ENST00000600456 ERCC8Q13216 396 aa9.97□□□□□ -0.81
SNRPA-208ENST00000600456 RBMY1FQ15415 496 aaKnown RBP9.97□□□□□ -0.81
SNRPA-208ENST00000600456 SLC51BQ86UW2 128 aa9.97□□□□□ -0.81
SNRPA-208ENST00000600456 IQCF2Q8IXL9 164 aa9.97□□□□□ -0.81
SNRPA-208ENST00000600456 C9orf62Q8N4C0 152 aa9.97□□□□□ -0.81
SNRPA-208ENST00000600456 TMED6Q8WW62 240 aa9.97□□□□□ -0.81
SNRPA-208ENST00000600456 FAM19A4Q96LR4 140 aa9.97□□□□□ -0.81
SNRPA-208ENST00000600456 MAP1LC3BQ9GZQ8 125 aa9.97□□□□□ -0.81
SNRPA-208ENST00000600456 SERTM2A0A1B0GWG4 89 aa9.96□□□□□ -0.82
SNRPA-208ENST00000600456 A0A1W2PRE2 83 aa9.96□□□□□ -0.82
SNRPA-208ENST00000600456 DEFB4AO15263 64 aa9.96□□□□□ -0.82
SNRPA-208ENST00000600456 CRISP2P16562 243 aa9.96□□□□□ -0.82
SNRPA-208ENST00000600456 RAB5CP51148 216 aa9.96□□□□□ -0.82
SNRPA-208ENST00000600456 RRN3P1Q2M238 152 aa9.96□□□□□ -0.82
SNRPA-208ENST00000600456 GFI1BQ5VTD9 330 aa9.96□□□□□ -0.82
SNRPA-208ENST00000600456 C5orf17Q8NAS9 161 aa9.96□□□□□ -0.82
SNRPA-208ENST00000600456 C11orf45Q8TAV5 145 aa9.96□□□□□ -0.82
SNRPA-208ENST00000600456 FAM213BQ8TBF2 198 aa9.96□□□□□ -0.82
SNRPA-208ENST00000600456 MBD3L1Q8WWY6 194 aa9.96□□□□□ -0.82
SNRPA-208ENST00000600456 VGLL1Q99990 258 aa9.96□□□□□ -0.82
SNRPA-208ENST00000600456 NKX6-2Q9C056 277 aaPredicted RBP9.96□□□□□ -0.82
SNRPA-208ENST00000600456 PLA2G2EQ9NZK7 142 aa9.96□□□□□ -0.82
SNRPA-208ENST00000600456 ZNF492Q9P255 531 aa9.96□□□□□ -0.82
SNRPA-208ENST00000600456 LENEPQ9Y5L5 61 aa9.96□□□□□ -0.82
SNRPA-208ENST00000600456 KLLNB2CW77 178 aa9.95□□□□□ -0.82
SNRPA-208ENST00000600456 H7BYZ3 331 aa9.95□□□□□ -0.82
SNRPA-208ENST00000600456 FHITP49789 147 aa9.95□□□□□ -0.82
SNRPA-208ENST00000600456 FGF8P55075 233 aaPredicted RBP9.95□□□□□ -0.82
SNRPA-208ENST00000600456 TAS2R60P59551 318 aa9.95□□□□□ -0.82
SNRPA-208ENST00000600456 CASC10Q5T4H9 136 aa9.95□□□□□ -0.82
SNRPA-208ENST00000600456 LINC01587Q99440 93 aa9.95□□□□□ -0.82
SNRPA-208ENST00000600456 TEX48A0A1B0GUV7 120 aa9.94□□□□□ -0.82
SNRPA-208ENST00000600456 LOC102723971A0A1B0GUV8 181 aa9.94□□□□□ -0.82
SNRPA-208ENST00000600456 GGTLC3B5MD39 225 aa9.94□□□□□ -0.82
SNRPA-208ENST00000600456 GOLT1AQ6ZVE7 132 aa9.94□□□□□ -0.82
SNRPA-208ENST00000600456 SFT2D1Q8WV19 159 aa9.94□□□□□ -0.82
SNRPA-208ENST00000600456 ARL2-SNX15V9GYD0 113 aa9.94□□□□□ -0.82
SNRPA-208ENST00000600456 DNAH7Q8WXX0 4024 aa9.93□□□□□ -0.82
SNRPA-208ENST00000600456 C7orf71A4D174 169 aa9.93□□□□□ -0.82
SNRPA-208ENST00000600456 FBLL1A6NHQ2 334 aaKnown RBP9.93□□□□□ -0.82
SNRPA-208ENST00000600456 K7EQM0 130 aa9.93□□□□□ -0.82
SNRPA-208ENST00000600456 TCRAP04437 139 aa9.93□□□□□ -0.82
SNRPA-208ENST00000600456 GPX1P07203 203 aa9.93□□□□□ -0.82
SNRPA-208ENST00000600456 H2AFB1P0C5Y9 115 aa9.93□□□□□ -0.82
SNRPA-208ENST00000600456 SUMO1P63165 101 aaKnown RBP9.93□□□□□ -0.82
SNRPA-208ENST00000600456 KIR3DS1Q14943 382 aa9.93□□□□□ -0.82
SNRPA-208ENST00000600456 ZFAND6Q6FIF0 208 aa9.93□□□□□ -0.82
SNRPA-208ENST00000600456 ZFAND2AQ8N6M9 145 aa9.93□□□□□ -0.82
SNRPA-208ENST00000600456 Q8TAT8 98 aa9.93□□□□□ -0.82
SNRPA-208ENST00000600456 NIPSNAP3BQ9BS92 247 aa9.93□□□□□ -0.82
SNRPA-208ENST00000600456 TMPRSS5Q9H3S3 457 aa9.93□□□□□ -0.82
SNRPA-208ENST00000600456 EPDR1Q9UM22 224 aa9.93□□□□□ -0.82
SNRPA-208ENST00000600456 RPH3ALQ9UNE2 315 aa9.93□□□□□ -0.82
SNRPA-208ENST00000600456 TRAV12-3A0A0B4J271 114 aa9.92□□□□□ -0.82
SNRPA-208ENST00000600456 CXorf65A6NEN9 183 aa9.92□□□□□ -0.82
SNRPA-208ENST00000600456 NUPR2A6NF83 97 aa9.92□□□□□ -0.82
SNRPA-208ENST00000600456 ZNF705GA8MUZ8 300 aaPredicted RBP9.92□□□□□ -0.82
SNRPA-208ENST00000600456 J3KRW8 73 aa9.92□□□□□ -0.82
SNRPA-208ENST00000600456 SPART-AS1P0CW21 52 aa9.92□□□□□ -0.82
SNRPA-208ENST00000600456 GNG5P63218 68 aa9.92□□□□□ -0.82
SNRPA-208ENST00000600456 ZNF493Q6ZR52 646 aa9.92□□□□□ -0.82
SNRPA-208ENST00000600456 PYGO2Q9BRQ0 406 aa9.92□□□□□ -0.82
SNRPA-208ENST00000600456 TCEAL7Q9BRU2 100 aa9.92□□□□□ -0.82
SNRPA-208ENST00000600456 ATG101Q9BSB4 218 aa9.92□□□□□ -0.82
SNRPA-208ENST00000600456 YTHDF2Q9Y5A9 579 aaKnown RBP9.92□□□□□ -0.82
SNRPA-208ENST00000600456 TRAV1-1A0A0B4J248 108 aa9.91□□□□□ -0.82
SNRPA-208ENST00000600456 FAM74A7A6NL05 159 aa9.91□□□□□ -0.82
SNRPA-208ENST00000600456 RNASE4P34096 147 aaKnown RBP9.91□□□□□ -0.82
SNRPA-208ENST00000600456 SULT1A2P50226 295 aa9.91□□□□□ -0.82
SNRPA-208ENST00000600456 PPT1P50897 306 aa9.91□□□□□ -0.82
SNRPA-208ENST00000600456 NANOS2P60321 138 aaKnown RBP9.91□□□□□ -0.82
SNRPA-208ENST00000600456 UBE2G2P60604 165 aa9.91□□□□□ -0.82
SNRPA-208ENST00000600456 BTN1A1Q13410 526 aa9.91□□□□□ -0.82
SNRPA-208ENST00000600456 CYB561D1Q8N8Q1 229 aa9.91□□□□□ -0.82
SNRPA-208ENST00000600456 C16orf74Q96GX8 76 aa9.91□□□□□ -0.82
SNRPA-208ENST00000600456 LINC00467Q9BRT7 94 aa9.91□□□□□ -0.82
SNRPA-208ENST00000600456 TEX46H3BTG2 121 aa9.9□□□□□ -0.82
SNRPA-208ENST00000600456 ZNF324O75467 553 aaPredicted RBP9.9□□□□□ -0.82
SNRPA-208ENST00000600456 IFNA7P01567 189 aa9.9□□□□□ -0.82
SNRPA-208ENST00000600456 EMP1P54849 157 aa9.9□□□□□ -0.82
SNRPA-208ENST00000600456 PMS2P11Q13670 270 aa9.9□□□□□ -0.82
SNRPA-208ENST00000600456 CCDC28AQ8IWP9 274 aa9.9□□□□□ -0.82
SNRPA-208ENST00000600456 TMEM263Q8WUH6 116 aaKnown RBP9.9□□□□□ -0.82
SNRPA-208ENST00000600456 HIST1H2BAQ96A08 127 aa9.9□□□□□ -0.82
SNRPA-208ENST00000600456 NDFIP1Q9BT67 221 aa9.9□□□□□ -0.82
SNRPA-208ENST00000600456 DKK2Q9UBU2 259 aa9.9□□□□□ -0.82
SNRPA-208ENST00000600456 TRAV8-1A0A0A6YYK1 113 aa9.89□□□□□ -0.83
SNRPA-208ENST00000600456 LYRM9A8MSI8 78 aa9.89□□□□□ -0.83
SNRPA-208ENST00000600456 C11orf94C9JXX5 98 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 196.7 ms