RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 CLINT1Q14677 625 aa11.05□□□□□ -0.64
VRK3-221ENST00000600284 BLNKQ8WV28 456 aa11.05□□□□□ -0.64
VRK3-221ENST00000600284 RNF141Q8WVD5 230 aa11.05□□□□□ -0.64
VRK3-221ENST00000600284 AGPAT4-IT1Q9H0P7 198 aa11.05□□□□□ -0.64
VRK3-221ENST00000600284 OR51M1Q9H341 326 aa11.05□□□□□ -0.64
VRK3-221ENST00000600284 NACAE9PAV3 2078 aa11.05□□□□□ -0.64
VRK3-221ENST00000600284 KIAA1109Q2LD37 5005 aa11.05□□□□□ -0.64
VRK3-221ENST00000600284 H3BNG1 76 aa11.04□□□□□ -0.64
VRK3-221ENST00000600284 ZNF324O75467 553 aaPredicted RBP11.04□□□□□ -0.64
VRK3-221ENST00000600284 PET100P0DJ07 73 aa11.04□□□□□ -0.64
VRK3-221ENST00000600284 CRISP2P16562 243 aa11.04□□□□□ -0.64
VRK3-221ENST00000600284 M6PRP20645 277 aa11.04□□□□□ -0.64
VRK3-221ENST00000600284 H2BFSP57053 126 aa11.04□□□□□ -0.64
VRK3-221ENST00000600284 DEFA1P59665 94 aa11.04□□□□□ -0.64
VRK3-221ENST00000600284 DEFA3P59666 94 aa11.04□□□□□ -0.64
VRK3-221ENST00000600284 OR5I1Q13606 314 aa11.04□□□□□ -0.64
VRK3-221ENST00000600284 ICAM4Q14773 271 aa11.04□□□□□ -0.64
VRK3-221ENST00000600284 ANXA2RQ3ZCQ2 193 aa11.04□□□□□ -0.64
VRK3-221ENST00000600284 MIR17HGQ75NE6 70 aa11.04□□□□□ -0.64
VRK3-221ENST00000600284 EXOC3-AS1Q8N2X6 119 aa11.04□□□□□ -0.64
VRK3-221ENST00000600284 ZNF680Q8NEM1 530 aa11.04□□□□□ -0.64
VRK3-221ENST00000600284 ZNRF2Q8NHG8 242 aa11.04□□□□□ -0.64
VRK3-221ENST00000600284 PPP1R1CQ8WVI7 109 aa11.04□□□□□ -0.64
VRK3-221ENST00000600284 GAGE12BA1L429 117 aa11.03□□□□□ -0.64
VRK3-221ENST00000600284 GAGE7O76087 117 aa11.03□□□□□ -0.64
VRK3-221ENST00000600284 GAGE12FP0CL80 117 aa11.03□□□□□ -0.64
VRK3-221ENST00000600284 GAGE12GP0CL81 117 aa11.03□□□□□ -0.64
VRK3-221ENST00000600284 GAGE12IP0CL82 117 aa11.03□□□□□ -0.64
VRK3-221ENST00000600284 TMEM78Q5T7P6 136 aa11.03□□□□□ -0.64
VRK3-221ENST00000600284 RXFP4Q8TDU9 374 aa11.03□□□□□ -0.64
VRK3-221ENST00000600284 GNPNAT1Q96EK6 184 aaPredicted RBP11.03□□□□□ -0.64
VRK3-221ENST00000600284 C18orf15Q96N68 181 aa11.03□□□□□ -0.64
VRK3-221ENST00000600284 ATP5SQ99766 215 aa11.03□□□□□ -0.64
VRK3-221ENST00000600284 PAXXQ9BUH6 204 aa11.03□□□□□ -0.64
VRK3-221ENST00000600284 FUT9Q9Y231 359 aa11.03□□□□□ -0.64
VRK3-221ENST00000600284 LINC00588Q9Y4M8 146 aa11.03□□□□□ -0.64
VRK3-221ENST00000600284 TRBV7-9A0A0J9YWB2 115 aa11.02□□□□□ -0.65
VRK3-221ENST00000600284 NBDYA0A0U1RRE5 68 aa11.02□□□□□ -0.65
VRK3-221ENST00000600284 MPC2O95563 127 aa11.02□□□□□ -0.65
VRK3-221ENST00000600284 GPX1P07203 203 aa11.02□□□□□ -0.65
VRK3-221ENST00000600284 LYPD1Q8N2G4 141 aa11.02□□□□□ -0.65
VRK3-221ENST00000600284 EIF4E3Q8N5X7 224 aaKnown RBP11.02□□□□□ -0.65
VRK3-221ENST00000600284 TRAV26-1A0A087WT03 109 aa11.01□□□□□ -0.65
VRK3-221ENST00000600284 SSNA1O43805 119 aa11.01□□□□□ -0.65
VRK3-221ENST00000600284 MED14OSP0DP75 135 aa11.01□□□□□ -0.65
VRK3-221ENST00000600284 RNASE4P34096 147 aaKnown RBP11.01□□□□□ -0.65
VRK3-221ENST00000600284 CD300CQ08708 224 aa11.01□□□□□ -0.65
VRK3-221ENST00000600284 FAM122CQ6P4D5 195 aa11.01□□□□□ -0.65
VRK3-221ENST00000600284 SSX7Q7RTT5 188 aa11.01□□□□□ -0.65
VRK3-221ENST00000600284 C11orf72Q8NBR9 251 aa11.01□□□□□ -0.65
VRK3-221ENST00000600284 FXYD5Q96DB9 178 aa11.01□□□□□ -0.65
VRK3-221ENST00000600284 ZNF492Q9P255 531 aa11.01□□□□□ -0.65
VRK3-221ENST00000600284 HSPB11Q9Y547 144 aa11.01□□□□□ -0.65
VRK3-221ENST00000600284 PKHD1P08F94 4074 aa11.01□□□□□ -0.65
VRK3-221ENST00000600284 IGKV2-40A0A087WW87 121 aaPredicted RBP11□□□□□ -0.65
VRK3-221ENST00000600284 RBAKDNA6NC62 111 aa11□□□□□ -0.65
VRK3-221ENST00000600284 IGKV2D-40P01614 121 aaPredicted RBP11□□□□□ -0.65
VRK3-221ENST00000600284 HOXA5P20719 270 aa11□□□□□ -0.65
VRK3-221ENST00000600284 RPL12P30050 165 aaKnown RBP11□□□□□ -0.65
VRK3-221ENST00000600284 BTN1A1Q13410 526 aa11□□□□□ -0.65
VRK3-221ENST00000600284 IBA57Q5T440 356 aaKnown RBP11□□□□□ -0.65
VRK3-221ENST00000600284 Q6ZTI0 123 aa11□□□□□ -0.65
VRK3-221ENST00000600284 ZFAND2AQ8N6M9 145 aa11□□□□□ -0.65
VRK3-221ENST00000600284 VGLL1Q99990 258 aa11□□□□□ -0.65
VRK3-221ENST00000600284 GSN-AS1Q9NRJ2 163 aa11□□□□□ -0.65
VRK3-221ENST00000600284 PKD1P98161 4303 aa10.99□□□□□ -0.65
VRK3-221ENST00000600284 OR7C2O60412 319 aa10.99□□□□□ -0.65
VRK3-221ENST00000600284 IFNA5P01569 189 aa10.99□□□□□ -0.65
VRK3-221ENST00000600284 OR10J4P0C629 311 aa10.99□□□□□ -0.65
VRK3-221ENST00000600284 CSN1S1P47710 185 aa10.99□□□□□ -0.65
VRK3-221ENST00000600284 ZNF138P52744 262 aa10.99□□□□□ -0.65
VRK3-221ENST00000600284 C6orf223Q8N319 242 aa10.99□□□□□ -0.65
VRK3-221ENST00000600284 SCGB1C1Q8TD33 95 aa10.99□□□□□ -0.65
VRK3-221ENST00000600284 TRGV2A0A075B6R0 118 aa10.98□□□□□ -0.65
VRK3-221ENST00000600284 RGS13O14921 159 aa10.98□□□□□ -0.65
VRK3-221ENST00000600284 SPINK4O60575 86 aa10.98□□□□□ -0.65
VRK3-221ENST00000600284 TCL1AP56279 114 aa10.98□□□□□ -0.65
VRK3-221ENST00000600284 TAS2R45P59539 299 aa10.98□□□□□ -0.65
VRK3-221ENST00000600284 FFAR4Q5NUL3 377 aa10.98□□□□□ -0.65
VRK3-221ENST00000600284 PHYHIPLQ96FC7 376 aa10.98□□□□□ -0.65
VRK3-221ENST00000600284 UPK3BQ9BT76 320 aa10.98□□□□□ -0.65
VRK3-221ENST00000600284 TMPRSS5Q9H3S3 457 aa10.98□□□□□ -0.65
VRK3-221ENST00000600284 Q9H8V8 135 aa10.98□□□□□ -0.65
VRK3-221ENST00000600284 DNAH11Q96DT5 4516 aa10.97□□□□□ -0.65
VRK3-221ENST00000600284 IGHV1OR15-1A0A075B7D0 117 aa10.97□□□□□ -0.65
VRK3-221ENST00000600284 TRGV1A0A0A0MS02 117 aa10.97□□□□□ -0.65
VRK3-221ENST00000600284 A0A0J9YY99 117 aa10.97□□□□□ -0.65
VRK3-221ENST00000600284 RANP62826 216 aaKnown RBP10.97□□□□□ -0.65
VRK3-221ENST00000600284 KHDC3LQ587J8 217 aa10.97□□□□□ -0.65
VRK3-221ENST00000600284 Q9H3A6 140 aa10.97□□□□□ -0.65
VRK3-221ENST00000600284 BATF3Q9NR55 127 aa10.97□□□□□ -0.65
VRK3-221ENST00000600284 LENEPQ9Y5L5 61 aa10.97□□□□□ -0.65
VRK3-221ENST00000600284 DYNC1H1Q14204 4646 aaKnown RBP10.97□□□□□ -0.65
VRK3-221ENST00000600284 UBE2L3P68036 154 aaKnown RBP10.96□□□□□ -0.65
VRK3-221ENST00000600284 ESRGQ1W209 222 aa10.96□□□□□ -0.65
VRK3-221ENST00000600284 TTC32Q5I0X7 151 aa10.96□□□□□ -0.65
VRK3-221ENST00000600284 PRR9Q5T870 116 aa10.96□□□□□ -0.65
VRK3-221ENST00000600284 KLF12Q9Y4X4 402 aa10.96□□□□□ -0.65
VRK3-221ENST00000600284 BTF3P20290 206 aaKnown RBP10.95□□□□□ -0.66
VRK3-221ENST00000600284 ZNF266Q14584 549 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms