RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 PRR9Q5T870 116 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 NEGR1Q7Z3B1 354 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 S100A7AQ86SG5 101 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 WFDC10BQ8IUB3 73 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 IQCF2Q8IXL9 164 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 EIF4E3Q8N5X7 224 aaKnown RBP4.1□□□□□ -1.75
VRK3-220ENST00000600259 ZFAND2AQ8N6M9 145 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 OR10P1Q8NGE3 313 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 LINC00477Q96M19 166 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 MGST2Q99735 147 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 MRPL32Q9BYC8 188 aaKnown RBP4.1□□□□□ -1.75
VRK3-220ENST00000600259 DNAJC4Q9NNZ3 241 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 MSRB1Q9NZV6 116 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 HHLA3Q9XRX5 114 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 RNF24Q9Y225 148 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 TRBV19A0A075B6N1 114 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 TRAV9-2A0A087WT02 112 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 C7orf66A4D0T2 115 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 SSSCA1O60232 199 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 TSC22D2O75157 780 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 ZNF253O75346 499 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 GHRHP01286 108 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 OR4E1P0C645 316 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 UBE2MP61081 183 aaKnown RBP4.09□□□□□ -1.75
VRK3-220ENST00000600259 SLAQ13239 276 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 BTN1A1Q13410 526 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 GUK1Q16774 197 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 C9orf47Q6ZRZ4 202 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 Q6ZSN1 163 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 ZNF546Q86UE3 836 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 TOMM5Q8N4H5 51 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 ZNF680Q8NEM1 530 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 DEDD2Q8WXF8 326 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 MRPL53Q96EL3 112 aaKnown RBP4.09□□□□□ -1.75
VRK3-220ENST00000600259 C8orf49Q96NF6 230 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 VGLL1Q99990 258 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 GGACTQ9BVM4 153 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 C11orf1Q9H5F2 150 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 FLVCR2Q9UPI3 526 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 RCL1Q9Y2P8 373 aaKnown RBP4.09□□□□□ -1.75
VRK3-220ENST00000600259 LY96Q9Y6Y9 160 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 V9GYH0 126 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 FAT3Q8TDW7 4589 aa4.09□□□□□ -1.75
VRK3-220ENST00000600259 K7EQD1 137 aa4.08□□□□□ -1.76
VRK3-220ENST00000600259 COX7A2P2O60397 106 aa4.08□□□□□ -1.76
VRK3-220ENST00000600259 MPDU1O75352 247 aa4.08□□□□□ -1.76
VRK3-220ENST00000600259 MBPP02686 304 aaPredicted RBP4.08□□□□□ -1.76
VRK3-220ENST00000600259 C1QBP02746 253 aa4.08□□□□□ -1.76
VRK3-220ENST00000600259 NMBP08949 121 aa4.08□□□□□ -1.76
VRK3-220ENST00000600259 RNASE4P34096 147 aaKnown RBP4.08□□□□□ -1.76
VRK3-220ENST00000600259 FAUP35544 74 aaKnown RBP4.08□□□□□ -1.76
VRK3-220ENST00000600259 TMBIM6P55061 237 aa4.08□□□□□ -1.76
VRK3-220ENST00000600259 KRTAP10-4P60372 401 aaPredicted RBP4.08□□□□□ -1.76
VRK3-220ENST00000600259 C10orf113Q5VZT2 155 aa4.08□□□□□ -1.76
VRK3-220ENST00000600259 MIC13Q5XKP0 118 aa4.08□□□□□ -1.76
VRK3-220ENST00000600259 Q6ZSA8 131 aa4.08□□□□□ -1.76
VRK3-220ENST00000600259 MCFD2Q8NI22 146 aa4.08□□□□□ -1.76
VRK3-220ENST00000600259 RAB2BQ8WUD1 216 aa4.08□□□□□ -1.76
VRK3-220ENST00000600259 CHAC2Q8WUX2 184 aa4.08□□□□□ -1.76
VRK3-220ENST00000600259 ZNF479Q96JC4 524 aa4.08□□□□□ -1.76
VRK3-220ENST00000600259 BCL7BQ9BQE9 202 aa4.08□□□□□ -1.76
VRK3-220ENST00000600259 MRPL16Q9NX20 251 aaKnown RBP4.08□□□□□ -1.76
VRK3-220ENST00000600259 MGAT4CQ9UBM8 478 aa4.08□□□□□ -1.76
VRK3-220ENST00000600259 UBR4Q5T4S7 5183 aa4.08□□□□□ -1.76
VRK3-220ENST00000600259 IGHV1OR15-1A0A075B7D0 117 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 IGLV5-52A0A0A0MRZ9 124 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 IBA57-AS1B1ANH7 110 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 E5RGE8 158 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 H3BMQ9 156 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 PFDN1O60925 122 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 NDUFB6O95139 128 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 SFTA3P0C7M3 94 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 HIST1H1EP10412 219 aaKnown RBP4.07□□□□□ -1.76
VRK3-220ENST00000600259 EVI2AP22794 236 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 RPL29P47914 159 aaKnown RBP4.07□□□□□ -1.76
VRK3-220ENST00000600259 CAMLGP49069 296 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 AP3S2P59780 193 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 ZNF415Q09FC8 603 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 IAH1Q2TAA2 248 aaPredicted RBP4.07□□□□□ -1.76
VRK3-220ENST00000600259 VWC2Q2TAL6 325 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 PYDC2Q56P42 97 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 Q6ZNX1 250 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 NRARPQ7Z6K4 114 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 EXOC3-AS1Q8N2X6 119 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 OR10G4Q8NGN3 311 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 NTN5Q8WTR8 489 aaPredicted RBP4.07□□□□□ -1.76
VRK3-220ENST00000600259 RASL10AQ92737 203 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 FAM167A-AS1Q96KT0 104 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 TMEM14CQ9P0S9 112 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 ZNF492Q9P255 531 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 PRELID1Q9Y255 219 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 WDR83OSQ9Y284 106 aa4.07□□□□□ -1.76
VRK3-220ENST00000600259 IGKV2-40A0A087WW87 121 aaPredicted RBP4.06□□□□□ -1.76
VRK3-220ENST00000600259 LOC100131303A0A0U1RQF7 123 aa4.06□□□□□ -1.76
VRK3-220ENST00000600259 IGKV2D-40P01614 121 aaPredicted RBP4.06□□□□□ -1.76
VRK3-220ENST00000600259 GPX1P07203 203 aa4.06□□□□□ -1.76
VRK3-220ENST00000600259 CRYGDP07320 174 aa4.06□□□□□ -1.76
VRK3-220ENST00000600259 PYYP10082 97 aa4.06□□□□□ -1.76
VRK3-220ENST00000600259 GYPEP15421 78 aa4.06□□□□□ -1.76
VRK3-220ENST00000600259 BTCP35070 178 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms