RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 PFDN1O60925 122 aa12.17□□□□□ -0.46
SSBP4-207ENST00000600244 HBE1P02100 147 aa12.17□□□□□ -0.46
SSBP4-207ENST00000600244 M6PRP20645 277 aa12.17□□□□□ -0.46
SSBP4-207ENST00000600244 FXYD7P58549 80 aa12.17□□□□□ -0.46
SSBP4-207ENST00000600244 FAM78BQ5VT40 261 aa12.17□□□□□ -0.46
SSBP4-207ENST00000600244 C1orf158Q8N1D5 194 aa12.17□□□□□ -0.46
SSBP4-207ENST00000600244 FAM167A-AS1Q96KT0 104 aa12.17□□□□□ -0.46
SSBP4-207ENST00000600244 ZNF471Q9BX82 626 aaPredicted RBP12.17□□□□□ -0.46
SSBP4-207ENST00000600244 MRPL32Q9BYC8 188 aaKnown RBP12.17□□□□□ -0.46
SSBP4-207ENST00000600244 SLC25A22Q9H936 323 aa12.17□□□□□ -0.46
SSBP4-207ENST00000600244 TRAV5A0A0B4J249 113 aa12.16□□□□□ -0.46
SSBP4-207ENST00000600244 RPL7P18124 248 aaKnown RBP12.16□□□□□ -0.46
SSBP4-207ENST00000600244 NKX2-5P52952 324 aaPredicted RBP12.16□□□□□ -0.46
SSBP4-207ENST00000600244 RAB2AP61019 212 aa12.16□□□□□ -0.46
SSBP4-207ENST00000600244 ACOT6Q3I5F7 207 aaPredicted RBP12.16□□□□□ -0.46
SSBP4-207ENST00000600244 SPATA31B1PQ5VZV4 182 aa12.16□□□□□ -0.46
SSBP4-207ENST00000600244 MIR17HGQ75NE6 70 aa12.16□□□□□ -0.46
SSBP4-207ENST00000600244 RNF141Q8WVD5 230 aa12.16□□□□□ -0.46
SSBP4-207ENST00000600244 FUT9Q9Y231 359 aa12.16□□□□□ -0.46
SSBP4-207ENST00000600244 A0A087X0K7 114 aa12.15□□□□□ -0.46
SSBP4-207ENST00000600244 F5H768 121 aa12.15□□□□□ -0.46
SSBP4-207ENST00000600244 SOCS3O14543 225 aa12.15□□□□□ -0.46
SSBP4-207ENST00000600244 SEC11BP0C7V7 166 aa12.15□□□□□ -0.46
SSBP4-207ENST00000600244 IGLC2P0DOY2 106 aa12.15□□□□□ -0.46
SSBP4-207ENST00000600244 GALR1P47211 349 aa12.15□□□□□ -0.46
SSBP4-207ENST00000600244 LINC00315P59091 139 aa12.15□□□□□ -0.46
SSBP4-207ENST00000600244 EIF5AP63241 154 aaKnown RBP12.15□□□□□ -0.46
SSBP4-207ENST00000600244 HAMPP81172 84 aa12.15□□□□□ -0.46
SSBP4-207ENST00000600244 BAP18Q8IXM2 172 aa12.15□□□□□ -0.46
SSBP4-207ENST00000600244 UPK3BQ9BT76 320 aa12.15□□□□□ -0.46
SSBP4-207ENST00000600244 NRN1Q9NPD7 142 aa12.15□□□□□ -0.46
SSBP4-207ENST00000600244 RPRMQ9NS64 109 aa12.15□□□□□ -0.46
SSBP4-207ENST00000600244 ZNF586Q9NXT0 402 aa12.15□□□□□ -0.46
SSBP4-207ENST00000600244 TMEM14CQ9P0S9 112 aa12.15□□□□□ -0.46
SSBP4-207ENST00000600244 EREGO14944 169 aa12.14□□□□□ -0.47
SSBP4-207ENST00000600244 MBP02144 154 aa12.14□□□□□ -0.47
SSBP4-207ENST00000600244 TPT1P13693 172 aaKnown RBP12.14□□□□□ -0.47
SSBP4-207ENST00000600244 SNRPD3P62318 126 aaKnown RBP12.14□□□□□ -0.47
SSBP4-207ENST00000600244 RHOBP62745 196 aa12.14□□□□□ -0.47
SSBP4-207ENST00000600244 RRN3P1Q2M238 152 aa12.14□□□□□ -0.47
SSBP4-207ENST00000600244 GDF5OSQ5U4N7 250 aa12.14□□□□□ -0.47
SSBP4-207ENST00000600244 SLC51BQ86UW2 128 aa12.14□□□□□ -0.47
SSBP4-207ENST00000600244 BPIFA4PQ86YQ2 179 aa12.14□□□□□ -0.47
SSBP4-207ENST00000600244 OR10G4Q8NGN3 311 aa12.14□□□□□ -0.47
SSBP4-207ENST00000600244 OR10G9Q8NGN4 311 aa12.14□□□□□ -0.47
SSBP4-207ENST00000600244 OR10G7Q8NGN6 311 aa12.14□□□□□ -0.47
SSBP4-207ENST00000600244 CLUHP3Q96NS8 147 aa12.14□□□□□ -0.47
SSBP4-207ENST00000600244 SLC25A2Q9BXI2 301 aa12.14□□□□□ -0.47
SSBP4-207ENST00000600244 GOLT1BQ9Y3E0 138 aa12.14□□□□□ -0.47
SSBP4-207ENST00000600244 IGKV3-20P01619 116 aa12.13□□□□□ -0.47
SSBP4-207ENST00000600244 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.13□□□□□ -0.47
SSBP4-207ENST00000600244 LYRM9A8MSI8 78 aa12.12□□□□□ -0.47
SSBP4-207ENST00000600244 BOLA1Q9Y3E2 137 aa12.12□□□□□ -0.47
SSBP4-207ENST00000600244 H3BQ15 152 aa12.11□□□□□ -0.47
SSBP4-207ENST00000600244 BOLA2-SMG1P6H3BVE0 249 aa12.11□□□□□ -0.47
SSBP4-207ENST00000600244 MEOX2P50222 304 aa12.11□□□□□ -0.47
SSBP4-207ENST00000600244 DEFB1P60022 68 aa12.11□□□□□ -0.47
SSBP4-207ENST00000600244 ERVFC1-1P60608 527 aa12.11□□□□□ -0.47
SSBP4-207ENST00000600244 ZNF726P1Q15940 193 aa12.11□□□□□ -0.47
SSBP4-207ENST00000600244 FAM122CQ6P4D5 195 aa12.11□□□□□ -0.47
SSBP4-207ENST00000600244 TMED6Q8WW62 240 aa12.11□□□□□ -0.47
SSBP4-207ENST00000600244 RAB24Q969Q5 203 aa12.11□□□□□ -0.47
SSBP4-207ENST00000600244 FXYD5Q96DB9 178 aa12.11□□□□□ -0.47
SSBP4-207ENST00000600244 A0A1W2PPV4 95 aa12.1□□□□□ -0.47
SSBP4-207ENST00000600244 ISLRO14498 428 aa12.1□□□□□ -0.47
SSBP4-207ENST00000600244 STAG3L2P0CL84 134 aa12.1□□□□□ -0.47
SSBP4-207ENST00000600244 STAG3L3P0CL85 134 aa12.1□□□□□ -0.47
SSBP4-207ENST00000600244 DEFB130BP0DP73 79 aa12.1□□□□□ -0.47
SSBP4-207ENST00000600244 DEFB130AP0DP74 79 aa12.1□□□□□ -0.47
SSBP4-207ENST00000600244 PYYP10082 97 aa12.1□□□□□ -0.47
SSBP4-207ENST00000600244 HIST1H1EP10412 219 aaKnown RBP12.1□□□□□ -0.47
SSBP4-207ENST00000600244 GCSHP23434 173 aa12.1□□□□□ -0.47
SSBP4-207ENST00000600244 CDC34P49427 236 aaPredicted RBP12.1□□□□□ -0.47
SSBP4-207ENST00000600244 SAMD13Q5VXD3 122 aa12.1□□□□□ -0.47
SSBP4-207ENST00000600244 SAT2Q96F10 170 aaPredicted RBP12.1□□□□□ -0.47
SSBP4-207ENST00000600244 SLC35B3Q9H1N7 401 aa12.1□□□□□ -0.47
SSBP4-207ENST00000600244 FAT3Q8TDW7 4589 aa12.1□□□□□ -0.47
SSBP4-207ENST00000600244 TRAV8-2A0A0B4J237 113 aa12.09□□□□□ -0.47
SSBP4-207ENST00000600244 UMAD1C9J7I0 102 aa12.09□□□□□ -0.47
SSBP4-207ENST00000600244 EIF3GO75821 320 aaKnown RBP eCLIP12.09□□□□□ -0.47
SSBP4-207ENST00000600244 PSMB3P49720 205 aa12.09□□□□□ -0.47
SSBP4-207ENST00000600244 TAS2R45P59539 299 aa12.09□□□□□ -0.47
SSBP4-207ENST00000600244 GUK1Q16774 197 aa12.09□□□□□ -0.47
SSBP4-207ENST00000600244 ESRGQ1W209 222 aa12.09□□□□□ -0.47
SSBP4-207ENST00000600244 KHDC3LQ587J8 217 aa12.09□□□□□ -0.47
SSBP4-207ENST00000600244 AKR1C8PQ5T2L2 129 aa12.09□□□□□ -0.47
SSBP4-207ENST00000600244 DEFB104AQ8WTQ1 72 aa12.09□□□□□ -0.47
SSBP4-207ENST00000600244 ACTR3CQ9C0K3 210 aaPredicted RBP12.09□□□□□ -0.47
SSBP4-207ENST00000600244 OR51M1Q9H341 326 aa12.09□□□□□ -0.47
SSBP4-207ENST00000600244 SAV1Q9H4B6 383 aaPredicted RBP12.09□□□□□ -0.47
SSBP4-207ENST00000600244 TRBV19A0A075B6N1 114 aa12.08□□□□□ -0.48
SSBP4-207ENST00000600244 CTXND1A0A1B0GTU2 59 aa12.08□□□□□ -0.48
SSBP4-207ENST00000600244 ZNF253O75346 499 aa12.08□□□□□ -0.48
SSBP4-207ENST00000600244 NDUFB4O95168 129 aa12.08□□□□□ -0.48
SSBP4-207ENST00000600244 ATP5G1P05496 136 aa12.08□□□□□ -0.48
SSBP4-207ENST00000600244 ATP5G3P48201 142 aa12.08□□□□□ -0.48
SSBP4-207ENST00000600244 EIF5AL1Q6IS14 154 aaKnown RBP12.08□□□□□ -0.48
SSBP4-207ENST00000600244 LCN15Q6UWW0 184 aa12.08□□□□□ -0.48
SSBP4-207ENST00000600244 PQLC2Q6ZP29 291 aa12.08□□□□□ -0.48
SSBP4-207ENST00000600244 SUN5Q8TC36 379 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms