RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 C5orf17Q8NAS9 161 aa13.77□□□□□ -0.21
CCDC9-205ENST00000600117 CMTM2Q8TAZ6 248 aa13.77□□□□□ -0.21
CCDC9-205ENST00000600117 SLC35B3Q9H1N7 401 aa13.77□□□□□ -0.21
CCDC9-205ENST00000600117 RBAKDNA6NC62 111 aa13.76□□□□□ -0.21
CCDC9-205ENST00000600117 PAGE4O60829 102 aa13.76□□□□□ -0.21
CCDC9-205ENST00000600117 CA1P00915 261 aaPredicted RBP13.76□□□□□ -0.21
CCDC9-205ENST00000600117 C9orf47Q6ZRZ4 202 aa13.76□□□□□ -0.21
CCDC9-205ENST00000600117 CCDC28AQ8IWP9 274 aa13.76□□□□□ -0.21
CCDC9-205ENST00000600117 LYPD6BQ8NI32 183 aa13.76□□□□□ -0.21
CCDC9-205ENST00000600117 VGLL1Q99990 258 aa13.76□□□□□ -0.21
CCDC9-205ENST00000600117 TM2D3Q9BRN9 247 aa13.76□□□□□ -0.21
CCDC9-205ENST00000600117 AGPAT4-IT1Q9H0P7 198 aa13.76□□□□□ -0.21
CCDC9-205ENST00000600117 TEX46H3BTG2 121 aa13.75□□□□□ -0.21
CCDC9-205ENST00000600117 CT45A10P0DMU9 189 aa13.75□□□□□ -0.21
CCDC9-205ENST00000600117 PPT1P50897 306 aa13.75□□□□□ -0.21
CCDC9-205ENST00000600117 FXYD7P58549 80 aa13.75□□□□□ -0.21
CCDC9-205ENST00000600117 NKX6-2Q9C056 277 aaPredicted RBP13.75□□□□□ -0.21
CCDC9-205ENST00000600117 EPDR1Q9UM22 224 aa13.75□□□□□ -0.21
CCDC9-205ENST00000600117 RPH3ALQ9UNE2 315 aa13.75□□□□□ -0.21
CCDC9-205ENST00000600117 ALMS1Q8TCU4 4167 aa13.75□□□□□ -0.21
CCDC9-205ENST00000600117 IFNA7P01567 189 aa13.74□□□□□ -0.21
CCDC9-205ENST00000600117 TCRAP04437 139 aa13.74□□□□□ -0.21
CCDC9-205ENST00000600117 ATP5G3P48201 142 aa13.74□□□□□ -0.21
CCDC9-205ENST00000600117 NUTF2P61970 127 aaKnown RBP13.74□□□□□ -0.21
CCDC9-205ENST00000600117 PMS2P11Q13670 270 aa13.74□□□□□ -0.21
CCDC9-205ENST00000600117 GOLT1AQ6ZVE7 132 aa13.74□□□□□ -0.21
CCDC9-205ENST00000600117 FAM19A4Q96LR4 140 aa13.74□□□□□ -0.21
CCDC9-205ENST00000600117 LINC00477Q96M19 166 aa13.74□□□□□ -0.21
CCDC9-205ENST00000600117 GNG13Q9P2W3 67 aa13.74□□□□□ -0.21
CCDC9-205ENST00000600117 FRAS1Q86XX4 4008 aa13.73□□□□□ -0.21
CCDC9-205ENST00000600117 CST9LP1Q5W188 147 aa13.73□□□□□ -0.21
CCDC9-205ENST00000600117 ZFAND6Q6FIF0 208 aa13.73□□□□□ -0.21
CCDC9-205ENST00000600117 Q6ZWC4 215 aa13.73□□□□□ -0.21
CCDC9-205ENST00000600117 CSNK1G2-AS1Q8NCQ2 148 aa13.73□□□□□ -0.21
CCDC9-205ENST00000600117 ODF3Q96PU9 254 aa13.73□□□□□ -0.21
CCDC9-205ENST00000600117 RETNQ9HD89 108 aa13.73□□□□□ -0.21
CCDC9-205ENST00000600117 MANBALQ9NQG1 85 aa13.73□□□□□ -0.21
CCDC9-205ENST00000600117 M0R2Z0 102 aa13.72□□□□□ -0.21
CCDC9-205ENST00000600117 SPINK13Q1W4C9 94 aa13.72□□□□□ -0.21
CCDC9-205ENST00000600117 DEFB135Q30KP9 77 aa13.72□□□□□ -0.21
CCDC9-205ENST00000600117 XCL2Q9UBD3 114 aa13.72□□□□□ -0.21
CCDC9-205ENST00000600117 SERTM2A0A1B0GWG4 89 aa13.71□□□□□ -0.21
CCDC9-205ENST00000600117 CRXO43186 299 aaPredicted RBP13.71□□□□□ -0.21
CCDC9-205ENST00000600117 ZNF138P52744 262 aa13.71□□□□□ -0.21
CCDC9-205ENST00000600117 IFITM2Q01629 132 aa13.71□□□□□ -0.21
CCDC9-205ENST00000600117 TMEM78Q5T7P6 136 aa13.71□□□□□ -0.21
CCDC9-205ENST00000600117 PCNPQ8WW12 178 aaKnown RBP13.71□□□□□ -0.21
CCDC9-205ENST00000600117 RNF183Q96D59 192 aa13.71□□□□□ -0.21
CCDC9-205ENST00000600117 SPATA25Q9BR10 227 aa13.71□□□□□ -0.21
CCDC9-205ENST00000600117 OVOL2Q9BRP0 275 aa13.71□□□□□ -0.21
CCDC9-205ENST00000600117 ATG101Q9BSB4 218 aa13.71□□□□□ -0.21
CCDC9-205ENST00000600117 C1QTNF4Q9BXJ3 329 aa13.71□□□□□ -0.21
CCDC9-205ENST00000600117 PPP1R14DQ9NXH3 145 aa13.71□□□□□ -0.21
CCDC9-205ENST00000600117 ZNF492Q9P255 531 aa13.71□□□□□ -0.21
CCDC9-205ENST00000600117 TRAV8-1A0A0A6YYK1 113 aa13.7□□□□□ -0.22
CCDC9-205ENST00000600117 PEX7O00628 323 aa13.7□□□□□ -0.22
CCDC9-205ENST00000600117 AMBPP02760 352 aa13.7□□□□□ -0.22
CCDC9-205ENST00000600117 CYB561D1Q8N8Q1 229 aa13.7□□□□□ -0.22
CCDC9-205ENST00000600117 Q8TAT8 98 aa13.7□□□□□ -0.22
CCDC9-205ENST00000600117 TCEAL7Q9BRU2 100 aa13.7□□□□□ -0.22
CCDC9-205ENST00000600117 ZMAT4Q9H898 229 aa13.7□□□□□ -0.22
CCDC9-205ENST00000600117 TP53TG1Q9Y2A0 90 aa13.7□□□□□ -0.22
CCDC9-205ENST00000600117 HERC2O95714 4834 aa13.69□□□□□ -0.22
CCDC9-205ENST00000600117 C11orf94C9JXX5 98 aa13.69□□□□□ -0.22
CCDC9-205ENST00000600117 IFNA1P01562 189 aa13.69□□□□□ -0.22
CCDC9-205ENST00000600117 IGLV2-11P01706 119 aa13.69□□□□□ -0.22
CCDC9-205ENST00000600117 NMBP08949 121 aa13.69□□□□□ -0.22
CCDC9-205ENST00000600117 BCL2P10415 239 aa13.69□□□□□ -0.22
CCDC9-205ENST00000600117 CRISP2P16562 243 aa13.69□□□□□ -0.22
CCDC9-205ENST00000600117 CDKN1BP46527 198 aa13.69□□□□□ -0.22
CCDC9-205ENST00000600117 KIR3DS1Q14943 382 aa13.69□□□□□ -0.22
CCDC9-205ENST00000600117 HIST1H2BAQ96A08 127 aa13.69□□□□□ -0.22
CCDC9-205ENST00000600117 IGF2BP2-AS1Q96M15 143 aa13.69□□□□□ -0.22
CCDC9-205ENST00000600117 TRAV12-2A0A075B6T6 113 aa13.68□□□□□ -0.22
CCDC9-205ENST00000600117 TRBV7-9A0A0J9YWB2 115 aa13.68□□□□□ -0.22
CCDC9-205ENST00000600117 SPRY2O43597 315 aa13.68□□□□□ -0.22
CCDC9-205ENST00000600117 TSPOP30536 169 aa13.68□□□□□ -0.22
CCDC9-205ENST00000600117 LEPP41159 167 aa13.68□□□□□ -0.22
CCDC9-205ENST00000600117 ZFAND2AQ8N6M9 145 aa13.68□□□□□ -0.22
CCDC9-205ENST00000600117 TMEM75Q8N9X5 138 aa13.68□□□□□ -0.22
CCDC9-205ENST00000600117 SGK494Q96LW2 274 aa13.68□□□□□ -0.22
CCDC9-205ENST00000600117 LINC00479Q96M42 142 aa13.68□□□□□ -0.22
CCDC9-205ENST00000600117 LOC102723971A0A1B0GUV8 181 aa13.67□□□□□ -0.22
CCDC9-205ENST00000600117 KLLNB2CW77 178 aa13.67□□□□□ -0.22
CCDC9-205ENST00000600117 RBMY1A1P0DJD3 496 aaKnown RBP13.67□□□□□ -0.22
CCDC9-205ENST00000600117 RBMY1CP0DJD4 496 aa13.67□□□□□ -0.22
CCDC9-205ENST00000600117 RBMY1FQ15415 496 aaKnown RBP13.67□□□□□ -0.22
CCDC9-205ENST00000600117 C1orf158Q8N1D5 194 aa13.67□□□□□ -0.22
CCDC9-205ENST00000600117 TVP23CQ96ET8 276 aa13.67□□□□□ -0.22
CCDC9-205ENST00000600117 TXNDC17Q9BRA2 123 aa13.67□□□□□ -0.22
CCDC9-205ENST00000600117 LENEPQ9Y5L5 61 aa13.67□□□□□ -0.22
CCDC9-205ENST00000600117 TRAV34A0A0B4J273 112 aa13.66□□□□□ -0.22
CCDC9-205ENST00000600117 SCO2A0A1W2PP80 73 aa13.66□□□□□ -0.22
CCDC9-205ENST00000600117 F6UZH7 168 aa13.66□□□□□ -0.22
CCDC9-205ENST00000600117 K7EQM0 130 aa13.66□□□□□ -0.22
CCDC9-205ENST00000600117 INSP01308 110 aa13.66□□□□□ -0.22
CCDC9-205ENST00000600117 FLI1Q01543 452 aaPredicted RBP13.66□□□□□ -0.22
CCDC9-205ENST00000600117 PRR9Q5T870 116 aa13.66□□□□□ -0.22
CCDC9-205ENST00000600117 GFI1BQ5VTD9 330 aa13.66□□□□□ -0.22
CCDC9-205ENST00000600117 ZNF705AQ6ZN79 300 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms