RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 FAM213BQ8TBF2 198 aa5.73□□□□□ -1.49
CHMP2A-205ENST00000600006 SUN5Q8TC36 379 aa5.73□□□□□ -1.49
CHMP2A-205ENST00000600006 BLNKQ8WV28 456 aa5.73□□□□□ -1.49
CHMP2A-205ENST00000600006 MBD3L1Q8WWY6 194 aa5.73□□□□□ -1.49
CHMP2A-205ENST00000600006 RPUSD4Q96CM3 377 aaKnown RBP5.73□□□□□ -1.49
CHMP2A-205ENST00000600006 ZNF503Q96F45 646 aa5.73□□□□□ -1.49
CHMP2A-205ENST00000600006 NKX6-2Q9C056 277 aaPredicted RBP5.73□□□□□ -1.49
CHMP2A-205ENST00000600006 IGHV3OR16-12A0A075B7B8 117 aa5.72□□□□□ -1.49
CHMP2A-205ENST00000600006 TRAV10A0A0B4J240 114 aa5.72□□□□□ -1.49
CHMP2A-205ENST00000600006 TRAV1-1A0A0B4J248 108 aa5.72□□□□□ -1.49
CHMP2A-205ENST00000600006 A0A1W2PRE2 83 aa5.72□□□□□ -1.49
CHMP2A-205ENST00000600006 H3BTX0 84 aa5.72□□□□□ -1.49
CHMP2A-205ENST00000600006 M0R2Z0 102 aa5.72□□□□□ -1.49
CHMP2A-205ENST00000600006 NDUFB4O95168 129 aa5.72□□□□□ -1.49
CHMP2A-205ENST00000600006 INSP01308 110 aa5.72□□□□□ -1.49
CHMP2A-205ENST00000600006 HBE1P02100 147 aa5.72□□□□□ -1.49
CHMP2A-205ENST00000600006 SNRPCP09234 159 aaKnown RBP5.72□□□□□ -1.49
CHMP2A-205ENST00000600006 H2AFB1P0C5Y9 115 aa5.72□□□□□ -1.49
CHMP2A-205ENST00000600006 CSN1S1P47710 185 aa5.72□□□□□ -1.49
CHMP2A-205ENST00000600006 TCTAP57738 103 aa5.72□□□□□ -1.49
CHMP2A-205ENST00000600006 SPINK13Q1W4C9 94 aa5.72□□□□□ -1.49
CHMP2A-205ENST00000600006 RXFP4Q8TDU9 374 aa5.72□□□□□ -1.49
CHMP2A-205ENST00000600006 C2CD4CQ8TF44 421 aa5.72□□□□□ -1.49
CHMP2A-205ENST00000600006 Q9H3A6 140 aa5.72□□□□□ -1.49
CHMP2A-205ENST00000600006 OTORQ9NRC9 128 aa5.72□□□□□ -1.49
CHMP2A-205ENST00000600006 TEX48A0A1B0GUV7 120 aa5.71□□□□□ -1.5
CHMP2A-205ENST00000600006 LOC102723971A0A1B0GUV8 181 aa5.71□□□□□ -1.5
CHMP2A-205ENST00000600006 SERTM2A0A1B0GWG4 89 aa5.71□□□□□ -1.5
CHMP2A-205ENST00000600006 RBAKDNA6NC62 111 aa5.71□□□□□ -1.5
CHMP2A-205ENST00000600006 PRAC2D3DTV9 90 aa5.71□□□□□ -1.5
CHMP2A-205ENST00000600006 HMGB3O15347 200 aaKnown RBP5.71□□□□□ -1.5
CHMP2A-205ENST00000600006 IFNA7P01567 189 aa5.71□□□□□ -1.5
CHMP2A-205ENST00000600006 FHITP49789 147 aa5.71□□□□□ -1.5
CHMP2A-205ENST00000600006 BLOC1S1P78537 153 aa5.71□□□□□ -1.5
CHMP2A-205ENST00000600006 RRN3P1Q2M238 152 aa5.71□□□□□ -1.5
CHMP2A-205ENST00000600006 C12orf74Q32Q52 190 aa5.71□□□□□ -1.5
CHMP2A-205ENST00000600006 ALKAL2Q6UX46 152 aa5.71□□□□□ -1.5
CHMP2A-205ENST00000600006 SSX7Q7RTT5 188 aa5.71□□□□□ -1.5
CHMP2A-205ENST00000600006 IQCF2Q8IXL9 164 aa5.71□□□□□ -1.5
CHMP2A-205ENST00000600006 OR10J6PQ8NGY7 276 aa5.71□□□□□ -1.5
CHMP2A-205ENST00000600006 CMTM2Q8TAZ6 248 aa5.71□□□□□ -1.5
CHMP2A-205ENST00000600006 SFT2D1Q8WV19 159 aa5.71□□□□□ -1.5
CHMP2A-205ENST00000600006 TCEAL7Q9BRU2 100 aa5.71□□□□□ -1.5
CHMP2A-205ENST00000600006 BOLA1Q9Y3E2 137 aa5.71□□□□□ -1.5
CHMP2A-205ENST00000600006 NPIPB6E9PJ23 425 aa5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 LY6G6CO95867 125 aa5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 IFNA1P01562 189 aa5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 SLC25A5P05141 298 aaKnown RBP5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 SPART-AS1P0CW21 52 aa5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 PRB4P10163 310 aaPredicted RBP5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 TAGLN2P37802 199 aaKnown RBP5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 CDKN1BP46527 198 aa5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 FGF8P55075 233 aaPredicted RBP5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 RANP62826 216 aaKnown RBP5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 ICAM4Q14773 271 aa5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 LGALS9CQ6DKI2 356 aa5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 TEX261Q6UWH6 196 aa5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 C5orf17Q8NAS9 161 aa5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 ODF3Q96PU9 254 aa5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 TXNDC17Q9BRA2 123 aa5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 TMEM208Q9BTX3 173 aa5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 MANBALQ9NQG1 85 aa5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 PLA2G2EQ9NZK7 142 aa5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 DKK2Q9UBU2 259 aa5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 APLNQ9ULZ1 77 aa5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 YTHDF2Q9Y5A9 579 aaKnown RBP5.7□□□□□ -1.5
CHMP2A-205ENST00000600006 IGHV4-4A0A075B6R2 117 aa5.69□□□□□ -1.5
CHMP2A-205ENST00000600006 TRAV12-2A0A075B6T6 113 aa5.69□□□□□ -1.5
CHMP2A-205ENST00000600006 PGPA6NDG6 321 aa5.69□□□□□ -1.5
CHMP2A-205ENST00000600006 FBLL1A6NHQ2 334 aaKnown RBP5.69□□□□□ -1.5
CHMP2A-205ENST00000600006 IGLL5B9A064 214 aa5.69□□□□□ -1.5
CHMP2A-205ENST00000600006 K7EQM0 130 aa5.69□□□□□ -1.5
CHMP2A-205ENST00000600006 M0R3E3 92 aa5.69□□□□□ -1.5
CHMP2A-205ENST00000600006 EIF3GO75821 320 aaKnown RBP eCLIP5.69□□□□□ -1.5
CHMP2A-205ENST00000600006 TSPOP30536 169 aa5.69□□□□□ -1.5
CHMP2A-205ENST00000600006 EMP1P54849 157 aa5.69□□□□□ -1.5
CHMP2A-205ENST00000600006 FAM222AQ5U5X8 452 aa5.69□□□□□ -1.5
CHMP2A-205ENST00000600006 ZNF767PQ75MW2 155 aa5.69□□□□□ -1.5
CHMP2A-205ENST00000600006 TMEM256Q8N2U0 113 aa5.69□□□□□ -1.5
CHMP2A-205ENST00000600006 EXOC3-AS1Q8N2X6 119 aa5.69□□□□□ -1.5
CHMP2A-205ENST00000600006 C20orf144Q9BQM9 153 aa5.69□□□□□ -1.5
CHMP2A-205ENST00000600006 PPP1R14DQ9NXH3 145 aa5.69□□□□□ -1.5
CHMP2A-205ENST00000600006 DNAH6Q9C0G6 4158 aa5.68□□□□□ -1.5
CHMP2A-205ENST00000600006 DEFB131BA0A096LNP1 70 aa5.68□□□□□ -1.5
CHMP2A-205ENST00000600006 TRBV7-9A0A0J9YWB2 115 aa5.68□□□□□ -1.5
CHMP2A-205ENST00000600006 PLAC8L1A1L4L8 177 aa5.68□□□□□ -1.5
CHMP2A-205ENST00000600006 FAM74A7A6NL05 159 aa5.68□□□□□ -1.5
CHMP2A-205ENST00000600006 ZNF705GA8MUZ8 300 aaPredicted RBP5.68□□□□□ -1.5
CHMP2A-205ENST00000600006 GGTLC3B5MD39 225 aa5.68□□□□□ -1.5
CHMP2A-205ENST00000600006 DIRC3C9JPN6 131 aa5.68□□□□□ -1.5
CHMP2A-205ENST00000600006 F6UZH7 168 aa5.68□□□□□ -1.5
CHMP2A-205ENST00000600006 TAS2R60P59551 318 aa5.68□□□□□ -1.5
CHMP2A-205ENST00000600006 TMEM78Q5T7P6 136 aa5.68□□□□□ -1.5
CHMP2A-205ENST00000600006 GFI1BQ5VTD9 330 aa5.68□□□□□ -1.5
CHMP2A-205ENST00000600006 C9orf47Q6ZRZ4 202 aa5.68□□□□□ -1.5
CHMP2A-205ENST00000600006 ZNF680Q8NEM1 530 aa5.68□□□□□ -1.5
CHMP2A-205ENST00000600006 LYPD6BQ8NI32 183 aa5.68□□□□□ -1.5
CHMP2A-205ENST00000600006 HIST1H2BAQ96A08 127 aa5.68□□□□□ -1.5
CHMP2A-205ENST00000600006 LINC00477Q96M19 166 aa5.68□□□□□ -1.5
CHMP2A-205ENST00000600006 NIPSNAP3BQ9BS92 247 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms