RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 TRGV1A0A0A0MS02 117 aa8.33□□□□□ -1.08
HOMER3-211ENST00000599808 SMLR1H3BR10 107 aa8.33□□□□□ -1.08
HOMER3-211ENST00000599808 H3BTX0 84 aa8.33□□□□□ -1.08
HOMER3-211ENST00000599808 GOSR2O14653 212 aa8.33□□□□□ -1.08
HOMER3-211ENST00000599808 PAX4O43316 350 aa8.33□□□□□ -1.08
HOMER3-211ENST00000599808 H2BFSP57053 126 aa8.33□□□□□ -1.08
HOMER3-211ENST00000599808 OR2T35Q8NGX2 323 aa8.33□□□□□ -1.08
HOMER3-211ENST00000599808 TMEM70Q9BUB7 260 aa8.33□□□□□ -1.08
HOMER3-211ENST00000599808 MSRB1Q9NZV6 116 aa8.33□□□□□ -1.08
HOMER3-211ENST00000599808 LRP1Q07954 4544 aaKnown RBP8.32□□□□□ -1.08
HOMER3-211ENST00000599808 TRAV9-2A0A087WT02 112 aa8.32□□□□□ -1.08
HOMER3-211ENST00000599808 RGS13O14921 159 aa8.32□□□□□ -1.08
HOMER3-211ENST00000599808 VAMP1P23763 118 aa8.32□□□□□ -1.08
HOMER3-211ENST00000599808 TEPPQ6URK8 271 aa8.32□□□□□ -1.08
HOMER3-211ENST00000599808 S100A7AQ86SG5 101 aa8.32□□□□□ -1.08
HOMER3-211ENST00000599808 C9orf62Q8N4C0 152 aa8.32□□□□□ -1.08
HOMER3-211ENST00000599808 OR11H4Q8NGC9 324 aa8.32□□□□□ -1.08
HOMER3-211ENST00000599808 ODF3Q96PU9 254 aa8.32□□□□□ -1.08
HOMER3-211ENST00000599808 LINC00467Q9BRT7 94 aa8.32□□□□□ -1.08
HOMER3-211ENST00000599808 LY96Q9Y6Y9 160 aa8.32□□□□□ -1.08
HOMER3-211ENST00000599808 KRTAP29-1A8MX34 341 aaPredicted RBP8.31□□□□□ -1.08
HOMER3-211ENST00000599808 K7EPK0 472 aa8.31□□□□□ -1.08
HOMER3-211ENST00000599808 SPINK4O60575 86 aa8.31□□□□□ -1.08
HOMER3-211ENST00000599808 IGHV3-53P01767 116 aa8.31□□□□□ -1.08
HOMER3-211ENST00000599808 LEPP41159 167 aa8.31□□□□□ -1.08
HOMER3-211ENST00000599808 IFITM2Q01629 132 aa8.31□□□□□ -1.08
HOMER3-211ENST00000599808 LINC00305Q7Z4B0 112 aa8.31□□□□□ -1.08
HOMER3-211ENST00000599808 ZNF680Q8NEM1 530 aa8.31□□□□□ -1.08
HOMER3-211ENST00000599808 RNF24Q9Y225 148 aa8.31□□□□□ -1.08
HOMER3-211ENST00000599808 KLF12Q9Y4X4 402 aa8.31□□□□□ -1.08
HOMER3-211ENST00000599808 IGLV5-52A0A0A0MRZ9 124 aa8.3□□□□□ -1.08
HOMER3-211ENST00000599808 NPIPB6E9PJ23 425 aa8.3□□□□□ -1.08
HOMER3-211ENST00000599808 SIX6O95475 246 aa8.3□□□□□ -1.08
HOMER3-211ENST00000599808 HOXB5P09067 269 aa8.3□□□□□ -1.08
HOMER3-211ENST00000599808 CRYBA4P53673 196 aa8.3□□□□□ -1.08
HOMER3-211ENST00000599808 POLR2GP62487 172 aaKnown RBP eCLIP8.3□□□□□ -1.08
HOMER3-211ENST00000599808 SLC38A11Q08AI6 406 aa8.3□□□□□ -1.08
HOMER3-211ENST00000599808 Q5BKY6 102 aa8.3□□□□□ -1.08
HOMER3-211ENST00000599808 MORN5Q5VZ52 161 aa8.3□□□□□ -1.08
HOMER3-211ENST00000599808 BPIFA4PQ86YQ2 179 aa8.3□□□□□ -1.08
HOMER3-211ENST00000599808 WFDC10BQ8IUB3 73 aa8.3□□□□□ -1.08
HOMER3-211ENST00000599808 SAT2Q96F10 170 aaPredicted RBP8.3□□□□□ -1.08
HOMER3-211ENST00000599808 NPVFQ9HCQ7 196 aa8.3□□□□□ -1.08
HOMER3-211ENST00000599808 PSENENQ9NZ42 101 aa8.3□□□□□ -1.08
HOMER3-211ENST00000599808 PRO0255Q9UI72 69 aa8.3□□□□□ -1.08
HOMER3-211ENST00000599808 PXMP4Q9Y6I8 212 aa8.3□□□□□ -1.08
HOMER3-211ENST00000599808 C7orf71A4D174 169 aa8.29□□□□□ -1.08
HOMER3-211ENST00000599808 HMSDA8MTL9 139 aa8.29□□□□□ -1.08
HOMER3-211ENST00000599808 H3BQ15 152 aa8.29□□□□□ -1.08
HOMER3-211ENST00000599808 K7EP13 123 aa8.29□□□□□ -1.08
HOMER3-211ENST00000599808 SLC25A5P05141 298 aaKnown RBP8.29□□□□□ -1.08
HOMER3-211ENST00000599808 IGLC2P0DOY2 106 aa8.29□□□□□ -1.08
HOMER3-211ENST00000599808 TCL1AP56279 114 aa8.29□□□□□ -1.08
HOMER3-211ENST00000599808 ID3Q02535 119 aa8.29□□□□□ -1.08
HOMER3-211ENST00000599808 MRPL23Q16540 153 aaKnown RBP8.29□□□□□ -1.08
HOMER3-211ENST00000599808 ANXA2RQ3ZCQ2 193 aa8.29□□□□□ -1.08
HOMER3-211ENST00000599808 PXDC1Q5TGL8 231 aa8.29□□□□□ -1.08
HOMER3-211ENST00000599808 NEGR1Q7Z3B1 354 aa8.29□□□□□ -1.08
HOMER3-211ENST00000599808 EIF4E3Q8N5X7 224 aaKnown RBP8.29□□□□□ -1.08
HOMER3-211ENST00000599808 C8orf49Q96NF6 230 aa8.29□□□□□ -1.08
HOMER3-211ENST00000599808 FAM30AQ9NZY2 134 aa8.29□□□□□ -1.08
HOMER3-211ENST00000599808 HHLA3Q9XRX5 114 aa8.29□□□□□ -1.08
HOMER3-211ENST00000599808 BOLA1Q9Y3E2 137 aa8.29□□□□□ -1.08
HOMER3-211ENST00000599808 LRCOL1A6NCL2 159 aa8.28□□□□□ -1.08
HOMER3-211ENST00000599808 CCSO14618 274 aa8.28□□□□□ -1.08
HOMER3-211ENST00000599808 EVI2AP22794 236 aa8.28□□□□□ -1.08
HOMER3-211ENST00000599808 BTN1A1Q13410 526 aa8.28□□□□□ -1.08
HOMER3-211ENST00000599808 FHL2Q14192 279 aa8.28□□□□□ -1.08
HOMER3-211ENST00000599808 OPCMLQ14982 345 aa8.28□□□□□ -1.08
HOMER3-211ENST00000599808 TMEM37Q8WXS4 190 aa8.28□□□□□ -1.08
HOMER3-211ENST00000599808 NMES1Q9C002 83 aa8.28□□□□□ -1.08
HOMER3-211ENST00000599808 MRPL16Q9NX20 251 aaKnown RBP8.28□□□□□ -1.08
HOMER3-211ENST00000599808 HSPB11Q9Y547 144 aa8.28□□□□□ -1.08
HOMER3-211ENST00000599808 KLLNB2CW77 178 aa8.27□□□□□ -1.09
HOMER3-211ENST00000599808 FNDC10F2Z333 226 aa8.27□□□□□ -1.09
HOMER3-211ENST00000599808 AGPAT2O15120 278 aa8.27□□□□□ -1.09
HOMER3-211ENST00000599808 SSSCA1O60232 199 aa8.27□□□□□ -1.09
HOMER3-211ENST00000599808 METTL15P1P0C7V9 234 aa8.27□□□□□ -1.09
HOMER3-211ENST00000599808 CYCSP99999 105 aaKnown RBP8.27□□□□□ -1.09
HOMER3-211ENST00000599808 ERCC8Q13216 396 aa8.27□□□□□ -1.09
HOMER3-211ENST00000599808 SLAQ13239 276 aa8.27□□□□□ -1.09
HOMER3-211ENST00000599808 IL15RAQ13261 267 aa8.27□□□□□ -1.09
HOMER3-211ENST00000599808 LGALSLQ3ZCW2 172 aaPredicted RBP8.27□□□□□ -1.09
HOMER3-211ENST00000599808 TMEM14EPQ6UXP3 125 aa8.27□□□□□ -1.09
HOMER3-211ENST00000599808 ZNF546Q86UE3 836 aa8.27□□□□□ -1.09
HOMER3-211ENST00000599808 NTN5Q8WTR8 489 aaPredicted RBP8.27□□□□□ -1.09
HOMER3-211ENST00000599808 VGLL1Q99990 258 aa8.27□□□□□ -1.09
HOMER3-211ENST00000599808 TP53TG3Q9ULZ0 132 aa8.27□□□□□ -1.09
HOMER3-211ENST00000599808 E5RGE8 158 aa8.26□□□□□ -1.09
HOMER3-211ENST00000599808 K7EQD1 137 aa8.26□□□□□ -1.09
HOMER3-211ENST00000599808 COX7A2P2O60397 106 aa8.26□□□□□ -1.09
HOMER3-211ENST00000599808 PLA2G1BP04054 148 aaKnown RBP8.26□□□□□ -1.09
HOMER3-211ENST00000599808 CRYGDP07320 174 aa8.26□□□□□ -1.09
HOMER3-211ENST00000599808 RNASE4P34096 147 aaKnown RBP8.26□□□□□ -1.09
HOMER3-211ENST00000599808 IBA57Q5T440 356 aaKnown RBP8.26□□□□□ -1.09
HOMER3-211ENST00000599808 SERTAD4-AS1Q5TG53 156 aa8.26□□□□□ -1.09
HOMER3-211ENST00000599808 SMIM8Q96KF7 97 aa8.26□□□□□ -1.09
HOMER3-211ENST00000599808 FAM19A4Q96LR4 140 aa8.26□□□□□ -1.09
HOMER3-211ENST00000599808 C2orf50Q96LR7 162 aa8.26□□□□□ -1.09
HOMER3-211ENST00000599808 MRPL32Q9BYC8 188 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms