RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 ZNF138P52744 262 aa12.07□□□□□ -0.48
SHKBP1-219ENST00000599575 SUMO1P63165 101 aaKnown RBP12.07□□□□□ -0.48
SHKBP1-219ENST00000599575 BLOC1S1P78537 153 aa12.07□□□□□ -0.48
SHKBP1-219ENST00000599575 TMEM256Q8N2U0 113 aa12.07□□□□□ -0.48
SHKBP1-219ENST00000599575 HIST1H2BAQ96A08 127 aa12.07□□□□□ -0.48
SHKBP1-219ENST00000599575 NEU1Q99519 415 aa12.07□□□□□ -0.48
SHKBP1-219ENST00000599575 RARRES2Q99969 163 aa12.07□□□□□ -0.48
SHKBP1-219ENST00000599575 TXNDC17Q9BRA2 123 aa12.07□□□□□ -0.48
SHKBP1-219ENST00000599575 AGPAT4-IT1Q9H0P7 198 aa12.07□□□□□ -0.48
SHKBP1-219ENST00000599575 TMPRSS5Q9H3S3 457 aa12.07□□□□□ -0.48
SHKBP1-219ENST00000599575 EPDR1Q9UM22 224 aa12.07□□□□□ -0.48
SHKBP1-219ENST00000599575 GOLT1BQ9Y3E0 138 aa12.07□□□□□ -0.48
SHKBP1-219ENST00000599575 SMIM9A6NGZ8 99 aa12.06□□□□□ -0.48
SHKBP1-219ENST00000599575 GGTLC3B5MD39 225 aa12.06□□□□□ -0.48
SHKBP1-219ENST00000599575 F6UZH7 168 aa12.06□□□□□ -0.48
SHKBP1-219ENST00000599575 TCRAP04437 139 aa12.06□□□□□ -0.48
SHKBP1-219ENST00000599575 CRISP2P16562 243 aa12.06□□□□□ -0.48
SHKBP1-219ENST00000599575 TAGLN2P37802 199 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-219ENST00000599575 ZNF705AQ6ZN79 300 aaPredicted RBP12.06□□□□□ -0.48
SHKBP1-219ENST00000599575 FAM19A4Q96LR4 140 aa12.06□□□□□ -0.48
SHKBP1-219ENST00000599575 ATG101Q9BSB4 218 aa12.06□□□□□ -0.48
SHKBP1-219ENST00000599575 MANBALQ9NQG1 85 aa12.06□□□□□ -0.48
SHKBP1-219ENST00000599575 ZNF492Q9P255 531 aa12.06□□□□□ -0.48
SHKBP1-219ENST00000599575 CT45A10P0DMU9 189 aa12.05□□□□□ -0.48
SHKBP1-219ENST00000599575 MIFP14174 115 aa12.05□□□□□ -0.48
SHKBP1-219ENST00000599575 SPINK13Q1W4C9 94 aa12.05□□□□□ -0.48
SHKBP1-219ENST00000599575 ALKAL2Q6UX46 152 aa12.05□□□□□ -0.48
SHKBP1-219ENST00000599575 CYB561D1Q8N8Q1 229 aa12.05□□□□□ -0.48
SHKBP1-219ENST00000599575 OR11H2Q8NH07 326 aa12.05□□□□□ -0.48
SHKBP1-219ENST00000599575 BOLA1Q9Y3E2 137 aa12.05□□□□□ -0.48
SHKBP1-219ENST00000599575 IGKV2-40A0A087WW87 121 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-219ENST00000599575 M0R2Z0 102 aa12.04□□□□□ -0.48
SHKBP1-219ENST00000599575 CRXO43186 299 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-219ENST00000599575 IFNA7P01567 189 aa12.04□□□□□ -0.48
SHKBP1-219ENST00000599575 IGKV2D-40P01614 121 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-219ENST00000599575 CCDC28AQ8IWP9 274 aa12.04□□□□□ -0.48
SHKBP1-219ENST00000599575 VGLL1Q99990 258 aa12.04□□□□□ -0.48
SHKBP1-219ENST00000599575 YTHDF2Q9Y5A9 579 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-219ENST00000599575 TENM3Q9P273 2699 aa12.04□□□□□ -0.48
SHKBP1-219ENST00000599575 KLLNB2CW77 178 aa12.03□□□□□ -0.48
SHKBP1-219ENST00000599575 IFNA1P01562 189 aa12.03□□□□□ -0.48
SHKBP1-219ENST00000599575 UBE2G2P60604 165 aa12.03□□□□□ -0.48
SHKBP1-219ENST00000599575 GOLT1AQ6ZVE7 132 aa12.03□□□□□ -0.48
SHKBP1-219ENST00000599575 C11orf68Q9H3H3 251 aaKnown RBP12.03□□□□□ -0.48
SHKBP1-219ENST00000599575 RETNQ9HD89 108 aa12.03□□□□□ -0.48
SHKBP1-219ENST00000599575 AGRNO00468 2067 aa12.02□□□□□ -0.48
SHKBP1-219ENST00000599575 H7BYZ3 331 aa12.02□□□□□ -0.49
SHKBP1-219ENST00000599575 FXYD7P58549 80 aa12.02□□□□□ -0.49
SHKBP1-219ENST00000599575 ERCC8Q13216 396 aa12.02□□□□□ -0.49
SHKBP1-219ENST00000599575 CST9LP1Q5W188 147 aa12.02□□□□□ -0.49
SHKBP1-219ENST00000599575 TEX261Q6UWH6 196 aa12.02□□□□□ -0.49
SHKBP1-219ENST00000599575 TMEM75Q8N9X5 138 aa12.02□□□□□ -0.49
SHKBP1-219ENST00000599575 NDFIP1Q9BT67 221 aa12.02□□□□□ -0.49
SHKBP1-219ENST00000599575 TMEM208Q9BTX3 173 aa12.02□□□□□ -0.49
SHKBP1-219ENST00000599575 TMEM189A5PLL7 270 aa12.01□□□□□ -0.49
SHKBP1-219ENST00000599575 PAGE4O60829 102 aa12.01□□□□□ -0.49
SHKBP1-219ENST00000599575 S100A9P06702 114 aaKnown RBP12.01□□□□□ -0.49
SHKBP1-219ENST00000599575 GPX1P07203 203 aa12.01□□□□□ -0.49
SHKBP1-219ENST00000599575 SAPCD1Q5SSQ6 148 aa12.01□□□□□ -0.49
SHKBP1-219ENST00000599575 C1orf158Q8N1D5 194 aa12.01□□□□□ -0.49
SHKBP1-219ENST00000599575 LYPD6BQ8NI32 183 aa12.01□□□□□ -0.49
SHKBP1-219ENST00000599575 NIPSNAP3BQ9BS92 247 aa12.01□□□□□ -0.49
SHKBP1-219ENST00000599575 X6R8D5 127 aa12.01□□□□□ -0.49
SHKBP1-219ENST00000599575 PEX7O00628 323 aa12□□□□□ -0.49
SHKBP1-219ENST00000599575 GNG5P63218 68 aa12□□□□□ -0.49
SHKBP1-219ENST00000599575 GFI1BQ5VTD9 330 aa12□□□□□ -0.49
SHKBP1-219ENST00000599575 IL17DQ8TAD2 202 aa12□□□□□ -0.49
SHKBP1-219ENST00000599575 WWC2-AS2Q96NR7 200 aa12□□□□□ -0.49
SHKBP1-219ENST00000599575 EDA2RQ9HAV5 297 aa12□□□□□ -0.49
SHKBP1-219ENST00000599575 GNG13Q9P2W3 67 aa12□□□□□ -0.49
SHKBP1-219ENST00000599575 RPH3ALQ9UNE2 315 aa12□□□□□ -0.49
SHKBP1-219ENST00000599575 TRAV12-2A0A075B6T6 113 aa11.99□□□□□ -0.49
SHKBP1-219ENST00000599575 A0A1B0GV50 99 aa11.99□□□□□ -0.49
SHKBP1-219ENST00000599575 C7orf71A4D174 169 aa11.99□□□□□ -0.49
SHKBP1-219ENST00000599575 C11orf94C9JXX5 98 aa11.99□□□□□ -0.49
SHKBP1-219ENST00000599575 TAS2R60P59551 318 aa11.99□□□□□ -0.49
SHKBP1-219ENST00000599575 FLI1Q01543 452 aaPredicted RBP11.99□□□□□ -0.49
SHKBP1-219ENST00000599575 ZFAND2AQ8N6M9 145 aa11.99□□□□□ -0.49
SHKBP1-219ENST00000599575 Q8NAQ8 132 aa11.99□□□□□ -0.49
SHKBP1-219ENST00000599575 FMC1Q96HJ9 113 aa11.99□□□□□ -0.49
SHKBP1-219ENST00000599575 PYGO2Q9BRQ0 406 aa11.99□□□□□ -0.49
SHKBP1-219ENST00000599575 KLF12Q9Y4X4 402 aa11.99□□□□□ -0.49
SHKBP1-219ENST00000599575 TRBV6-1A0A0K0K1D8 114 aa11.98□□□□□ -0.49
SHKBP1-219ENST00000599575 PDE6DO43924 150 aa11.98□□□□□ -0.49
SHKBP1-219ENST00000599575 CCL20P78556 96 aa11.98□□□□□ -0.49
SHKBP1-219ENST00000599575 RRN3P1Q2M238 152 aa11.98□□□□□ -0.49
SHKBP1-219ENST00000599575 ZNF493Q6ZR52 646 aa11.98□□□□□ -0.49
SHKBP1-219ENST00000599575 ZNF680Q8NEM1 530 aa11.98□□□□□ -0.49
SHKBP1-219ENST00000599575 LINC01587Q99440 93 aa11.98□□□□□ -0.49
SHKBP1-219ENST00000599575 LINC00467Q9BRT7 94 aa11.98□□□□□ -0.49
SHKBP1-219ENST00000599575 PSG8Q9UQ74 426 aa11.98□□□□□ -0.49
SHKBP1-219ENST00000599575 ZFP30Q9Y2G7 519 aa11.98□□□□□ -0.49
SHKBP1-219ENST00000599575 HUWE1Q7Z6Z7 4374 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-219ENST00000599575 TEX48A0A1B0GUV7 120 aa11.97□□□□□ -0.49
SHKBP1-219ENST00000599575 IGLV2-11P01706 119 aa11.97□□□□□ -0.49
SHKBP1-219ENST00000599575 PRB4P10163 310 aaPredicted RBP11.97□□□□□ -0.49
SHKBP1-219ENST00000599575 BCL2P10415 239 aa11.97□□□□□ -0.49
SHKBP1-219ENST00000599575 MEF2BQ02080 365 aaPredicted RBP11.97□□□□□ -0.49
SHKBP1-219ENST00000599575 Q8TAT8 98 aa11.97□□□□□ -0.49
SHKBP1-219ENST00000599575 TREM1Q9NP99 234 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms