RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 LINC00477Q96M19 166 aa6.83□□□□□ -1.32
VRK3-216ENST00000599342 TMPRSS5Q9H3S3 457 aa6.83□□□□□ -1.32
VRK3-216ENST00000599342 Q9H8V8 135 aa6.83□□□□□ -1.32
VRK3-216ENST00000599342 KCNIP2Q9NS61 270 aa6.83□□□□□ -1.32
VRK3-216ENST00000599342 C16orf90A8MZG2 172 aa6.82□□□□□ -1.32
VRK3-216ENST00000599342 KLLNB2CW77 178 aa6.82□□□□□ -1.32
VRK3-216ENST00000599342 E5RGE8 158 aa6.82□□□□□ -1.32
VRK3-216ENST00000599342 H3BNG1 76 aa6.82□□□□□ -1.32
VRK3-216ENST00000599342 NDUFB4O95168 129 aa6.82□□□□□ -1.32
VRK3-216ENST00000599342 GPX1P07203 203 aa6.82□□□□□ -1.32
VRK3-216ENST00000599342 HOXA5P20719 270 aa6.82□□□□□ -1.32
VRK3-216ENST00000599342 NHLH2Q02577 135 aa6.82□□□□□ -1.32
VRK3-216ENST00000599342 BTN1A1Q13410 526 aa6.82□□□□□ -1.32
VRK3-216ENST00000599342 ASAH1Q13510 395 aa6.82□□□□□ -1.32
VRK3-216ENST00000599342 ICAM4Q14773 271 aa6.82□□□□□ -1.32
VRK3-216ENST00000599342 GCSAMLQ5JQS6 135 aa6.82□□□□□ -1.32
VRK3-216ENST00000599342 TMEM78Q5T7P6 136 aa6.82□□□□□ -1.32
VRK3-216ENST00000599342 FAM122CQ6P4D5 195 aa6.82□□□□□ -1.32
VRK3-216ENST00000599342 Q6ZTI0 123 aa6.82□□□□□ -1.32
VRK3-216ENST00000599342 EXOC3-AS1Q8N2X6 119 aa6.82□□□□□ -1.32
VRK3-216ENST00000599342 EIF4E3Q8N5X7 224 aaKnown RBP6.82□□□□□ -1.32
VRK3-216ENST00000599342 SLC25A2Q9BXI2 301 aa6.82□□□□□ -1.32
VRK3-216ENST00000599342 NMES1Q9C002 83 aa6.82□□□□□ -1.32
VRK3-216ENST00000599342 GSN-AS1Q9NRJ2 163 aa6.82□□□□□ -1.32
VRK3-216ENST00000599342 DNAH11Q96DT5 4516 aa6.81□□□□□ -1.32
VRK3-216ENST00000599342 IGKV2-40A0A087WW87 121 aaPredicted RBP6.81□□□□□ -1.32
VRK3-216ENST00000599342 TRGV1A0A0A0MS02 117 aa6.81□□□□□ -1.32
VRK3-216ENST00000599342 C17orf112F2Z3M2 114 aa6.81□□□□□ -1.32
VRK3-216ENST00000599342 SIX6O95475 246 aa6.81□□□□□ -1.32
VRK3-216ENST00000599342 IGKV2D-40P01614 121 aaPredicted RBP6.81□□□□□ -1.32
VRK3-216ENST00000599342 RNASE4P34096 147 aaKnown RBP6.81□□□□□ -1.32
VRK3-216ENST00000599342 CD300CQ08708 224 aa6.81□□□□□ -1.32
VRK3-216ENST00000599342 ANXA2RQ3ZCQ2 193 aa6.81□□□□□ -1.32
VRK3-216ENST00000599342 C9orf47Q6ZRZ4 202 aa6.81□□□□□ -1.32
VRK3-216ENST00000599342 MIR17HGQ75NE6 70 aa6.81□□□□□ -1.32
VRK3-216ENST00000599342 LINC00467Q9BRT7 94 aa6.81□□□□□ -1.32
VRK3-216ENST00000599342 MRPL32Q9BYC8 188 aaKnown RBP6.81□□□□□ -1.32
VRK3-216ENST00000599342 AGPAT4-IT1Q9H0P7 198 aa6.81□□□□□ -1.32
VRK3-216ENST00000599342 OR51M1Q9H341 326 aa6.81□□□□□ -1.32
VRK3-216ENST00000599342 FUT9Q9Y231 359 aa6.81□□□□□ -1.32
VRK3-216ENST00000599342 RGS13O14921 159 aa6.8□□□□□ -1.32
VRK3-216ENST00000599342 PRAF2O60831 178 aa6.8□□□□□ -1.32
VRK3-216ENST00000599342 ZNF324O75467 553 aaPredicted RBP6.8□□□□□ -1.32
VRK3-216ENST00000599342 UPK1BO75841 260 aa6.8□□□□□ -1.32
VRK3-216ENST00000599342 NMBP08949 121 aa6.8□□□□□ -1.32
VRK3-216ENST00000599342 NBEAP1P0C6P0 100 aa6.8□□□□□ -1.32
VRK3-216ENST00000599342 CRISP2P16562 243 aa6.8□□□□□ -1.32
VRK3-216ENST00000599342 CYCSP99999 105 aaKnown RBP6.8□□□□□ -1.32
VRK3-216ENST00000599342 IBA57Q5T440 356 aaKnown RBP6.8□□□□□ -1.32
VRK3-216ENST00000599342 C11orf72Q8NBR9 251 aa6.8□□□□□ -1.32
VRK3-216ENST00000599342 FAM19A4Q96LR4 140 aa6.8□□□□□ -1.32
VRK3-216ENST00000599342 C18orf15Q96N68 181 aa6.8□□□□□ -1.32
VRK3-216ENST00000599342 ARPC5LQ9BPX5 153 aa6.8□□□□□ -1.32
VRK3-216ENST00000599342 UPK3BQ9BT76 320 aa6.8□□□□□ -1.32
VRK3-216ENST00000599342 PAXXQ9BUH6 204 aa6.8□□□□□ -1.32
VRK3-216ENST00000599342 WDR61Q9GZS3 305 aaKnown RBP6.8□□□□□ -1.32
VRK3-216ENST00000599342 Q9H3A6 140 aa6.8□□□□□ -1.32
VRK3-216ENST00000599342 OR5AC2Q9NZP5 309 aa6.8□□□□□ -1.32
VRK3-216ENST00000599342 MRPS16Q9Y3D3 137 aaKnown RBP6.8□□□□□ -1.32
VRK3-216ENST00000599342 PKD1P98161 4303 aa6.79□□□□□ -1.32
VRK3-216ENST00000599342 A0A1W2PPQ1 181 aa6.79□□□□□ -1.32
VRK3-216ENST00000599342 OR7C2O60412 319 aa6.79□□□□□ -1.32
VRK3-216ENST00000599342 OR10J4P0C629 311 aa6.79□□□□□ -1.32
VRK3-216ENST00000599342 PET100P0DJ07 73 aa6.79□□□□□ -1.32
VRK3-216ENST00000599342 CSN1S1P47710 185 aa6.79□□□□□ -1.32
VRK3-216ENST00000599342 TCL1AP56279 114 aa6.79□□□□□ -1.32
VRK3-216ENST00000599342 ESRGQ1W209 222 aa6.79□□□□□ -1.32
VRK3-216ENST00000599342 FAM167A-AS1Q96KT0 104 aa6.79□□□□□ -1.32
VRK3-216ENST00000599342 VGLL1Q99990 258 aa6.79□□□□□ -1.32
VRK3-216ENST00000599342 ZNF492Q9P255 531 aa6.79□□□□□ -1.32
VRK3-216ENST00000599342 KLF12Q9Y4X4 402 aa6.79□□□□□ -1.32
VRK3-216ENST00000599342 IGHV1OR15-1A0A075B7D0 117 aa6.78□□□□□ -1.32
VRK3-216ENST00000599342 INMT-MINDY4F8WBC2 141 aa6.78□□□□□ -1.32
VRK3-216ENST00000599342 SPINK4O60575 86 aa6.78□□□□□ -1.32
VRK3-216ENST00000599342 ZNF138P52744 262 aa6.78□□□□□ -1.32
VRK3-216ENST00000599342 UBE2L3P68036 154 aaKnown RBP6.78□□□□□ -1.32
VRK3-216ENST00000599342 ZNF415Q09FC8 603 aa6.78□□□□□ -1.32
VRK3-216ENST00000599342 ZFAND2AQ8N6M9 145 aa6.78□□□□□ -1.32
VRK3-216ENST00000599342 Q8TAT8 98 aa6.78□□□□□ -1.32
VRK3-216ENST00000599342 PPP1R1CQ8WVI7 109 aa6.78□□□□□ -1.32
VRK3-216ENST00000599342 FXYD5Q96DB9 178 aa6.78□□□□□ -1.32
VRK3-216ENST00000599342 PHYHIPLQ96FC7 376 aa6.78□□□□□ -1.32
VRK3-216ENST00000599342 ST6GAL2Q96JF0 529 aa6.78□□□□□ -1.32
VRK3-216ENST00000599342 ATP5SQ99766 215 aa6.78□□□□□ -1.32
VRK3-216ENST00000599342 ICOSQ9Y6W8 199 aa6.78□□□□□ -1.32
VRK3-216ENST00000599342 A0A096LPF7 62 aa6.77□□□□□ -1.33
VRK3-216ENST00000599342 TRBV7-9A0A0J9YWB2 115 aa6.77□□□□□ -1.33
VRK3-216ENST00000599342 H0YIZ8 118 aa6.77□□□□□ -1.33
VRK3-216ENST00000599342 PAX4O43316 350 aa6.77□□□□□ -1.33
VRK3-216ENST00000599342 SSNA1O43805 119 aa6.77□□□□□ -1.33
VRK3-216ENST00000599342 IFNA5P01569 189 aa6.77□□□□□ -1.33
VRK3-216ENST00000599342 IGHV3-53P01767 116 aa6.77□□□□□ -1.33
VRK3-216ENST00000599342 BTF3P20290 206 aaKnown RBP6.77□□□□□ -1.33
VRK3-216ENST00000599342 TAS2R45P59539 299 aa6.77□□□□□ -1.33
VRK3-216ENST00000599342 RANP62826 216 aaKnown RBP6.77□□□□□ -1.33
VRK3-216ENST00000599342 KHDC3LQ587J8 217 aa6.77□□□□□ -1.33
VRK3-216ENST00000599342 FFAR4Q5NUL3 377 aa6.77□□□□□ -1.33
VRK3-216ENST00000599342 PRR9Q5T870 116 aa6.77□□□□□ -1.33
VRK3-216ENST00000599342 LYPD1Q8N2G4 141 aa6.77□□□□□ -1.33
VRK3-216ENST00000599342 SCGB1C1Q8TD33 95 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms