RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 ARPC5O15511 151 aa16.24■□□□□ 0.19
IRF3-220ENST00000598108 LYPD1Q8N2G4 141 aa16.24■□□□□ 0.19
IRF3-220ENST00000598108 NIPSNAP3BQ9BS92 247 aa16.24■□□□□ 0.19
IRF3-220ENST00000598108 LY6G6CO95867 125 aa16.23■□□□□ 0.19
IRF3-220ENST00000598108 SERF2P84101 59 aa16.23■□□□□ 0.19
IRF3-220ENST00000598108 PQLC2Q6ZP29 291 aa16.23■□□□□ 0.19
IRF3-220ENST00000598108 RAB24Q969Q5 203 aa16.23■□□□□ 0.19
IRF3-220ENST00000598108 BORCS7-ASMTA0A0B4J1R7 106 aa16.22■□□□□ 0.19
IRF3-220ENST00000598108 TRAV12-3A0A0B4J271 114 aa16.22■□□□□ 0.19
IRF3-220ENST00000598108 H7BYZ3 331 aa16.22■□□□□ 0.19
IRF3-220ENST00000598108 CDC34P49427 236 aaPredicted RBP16.22■□□□□ 0.19
IRF3-220ENST00000598108 C20orf144Q9BQM9 153 aa16.22■□□□□ 0.19
IRF3-220ENST00000598108 CYTL1Q9NRR1 136 aa16.22■□□□□ 0.19
IRF3-220ENST00000598108 APLNQ9ULZ1 77 aa16.22■□□□□ 0.19
IRF3-220ENST00000598108 KLLNB2CW77 178 aa16.21■□□□□ 0.19
IRF3-220ENST00000598108 CD300CQ08708 224 aa16.21■□□□□ 0.19
IRF3-220ENST00000598108 OR11H4Q8NGC9 324 aa16.21■□□□□ 0.19
IRF3-220ENST00000598108 GNPNAT1Q96EK6 184 aaPredicted RBP16.21■□□□□ 0.19
IRF3-220ENST00000598108 VPS13DQ5THJ4 4388 aa16.2■□□□□ 0.18
IRF3-220ENST00000598108 TEX48A0A1B0GUV7 120 aa16.2■□□□□ 0.18
IRF3-220ENST00000598108 PGPA6NDG6 321 aa16.2■□□□□ 0.18
IRF3-220ENST00000598108 MBP02144 154 aa16.2■□□□□ 0.18
IRF3-220ENST00000598108 STAG3L2P0CL84 134 aa16.2■□□□□ 0.18
IRF3-220ENST00000598108 STAG3L3P0CL85 134 aa16.2■□□□□ 0.18
IRF3-220ENST00000598108 ARL14EPLP0DKL9 152 aa16.2■□□□□ 0.18
IRF3-220ENST00000598108 CSN1S1P47710 185 aa16.2■□□□□ 0.18
IRF3-220ENST00000598108 HYLS1Q96M11 299 aa16.2■□□□□ 0.18
IRF3-220ENST00000598108 OTORQ9NRC9 128 aa16.2■□□□□ 0.18
IRF3-220ENST00000598108 IGHV4-4A0A075B6R2 117 aa16.19■□□□□ 0.18
IRF3-220ENST00000598108 C7orf71A4D174 169 aa16.19■□□□□ 0.18
IRF3-220ENST00000598108 SLC25A5P05141 298 aaKnown RBP16.19■□□□□ 0.18
IRF3-220ENST00000598108 CRISP2P16562 243 aa16.19■□□□□ 0.18
IRF3-220ENST00000598108 BTN1A1Q13410 526 aa16.19■□□□□ 0.18
IRF3-220ENST00000598108 TMEM78Q5T7P6 136 aa16.19■□□□□ 0.18
IRF3-220ENST00000598108 SSX7Q7RTT5 188 aa16.19■□□□□ 0.18
IRF3-220ENST00000598108 ZFAND2AQ8N6M9 145 aa16.19■□□□□ 0.18
IRF3-220ENST00000598108 Q8TAT8 98 aa16.19■□□□□ 0.18
IRF3-220ENST00000598108 RNASE8Q8TDE3 154 aaKnown RBP16.19■□□□□ 0.18
IRF3-220ENST00000598108 ZNF492Q9P255 531 aa16.19■□□□□ 0.18
IRF3-220ENST00000598108 DIRC3C9JPN6 131 aa16.18■□□□□ 0.18
IRF3-220ENST00000598108 TAAR5O14804 337 aa16.18■□□□□ 0.18
IRF3-220ENST00000598108 ZNF324O75467 553 aaPredicted RBP16.18■□□□□ 0.18
IRF3-220ENST00000598108 RNASE4P34096 147 aaKnown RBP16.18■□□□□ 0.18
IRF3-220ENST00000598108 TCTAP57738 103 aa16.18■□□□□ 0.18
IRF3-220ENST00000598108 DAD1P61803 113 aa16.18■□□□□ 0.18
IRF3-220ENST00000598108 PRR9Q5T870 116 aa16.18■□□□□ 0.18
IRF3-220ENST00000598108 C16orf74Q96GX8 76 aa16.18■□□□□ 0.18
IRF3-220ENST00000598108 LYRM9A8MSI8 78 aa16.17■□□□□ 0.18
IRF3-220ENST00000598108 GCHFRP30047 84 aa16.17■□□□□ 0.18
IRF3-220ENST00000598108 ZNF138P52744 262 aa16.17■□□□□ 0.18
IRF3-220ENST00000598108 LGALS9CQ6DKI2 356 aa16.17■□□□□ 0.18
IRF3-220ENST00000598108 Q6ZQT7 251 aa16.17■□□□□ 0.18
IRF3-220ENST00000598108 ZNF493Q6ZR52 646 aa16.17■□□□□ 0.18
IRF3-220ENST00000598108 ACTR3CQ9C0K3 210 aaPredicted RBP16.17■□□□□ 0.18
IRF3-220ENST00000598108 RBAKDNA6NC62 111 aa16.16■□□□□ 0.18
IRF3-220ENST00000598108 NMBP08949 121 aa16.16■□□□□ 0.18
IRF3-220ENST00000598108 HTN3P15516 51 aa16.16■□□□□ 0.18
IRF3-220ENST00000598108 ZNF726P1Q15940 193 aa16.16■□□□□ 0.18
IRF3-220ENST00000598108 KCNRGQ8N5I3 272 aa16.16■□□□□ 0.18
IRF3-220ENST00000598108 SUN5Q8TC36 379 aa16.16■□□□□ 0.18
IRF3-220ENST00000598108 RXFP4Q8TDU9 374 aa16.16■□□□□ 0.18
IRF3-220ENST00000598108 TMEM263Q8WUH6 116 aaKnown RBP16.16■□□□□ 0.18
IRF3-220ENST00000598108 KMT2AQ03164 3969 aa16.15■□□□□ 0.18
IRF3-220ENST00000598108 GPX1P07203 203 aa16.15■□□□□ 0.18
IRF3-220ENST00000598108 DEFB130BP0DP73 79 aa16.15■□□□□ 0.18
IRF3-220ENST00000598108 DEFB130AP0DP74 79 aa16.15■□□□□ 0.18
IRF3-220ENST00000598108 PYGO2Q9BRQ0 406 aa16.15■□□□□ 0.18
IRF3-220ENST00000598108 NOP10Q9NPE3 64 aaKnown RBP16.15■□□□□ 0.18
IRF3-220ENST00000598108 TIMM8BQ9Y5J9 83 aaPredicted RBP16.15■□□□□ 0.18
IRF3-220ENST00000598108 HMSDA8MTL9 139 aa16.14■□□□□ 0.17
IRF3-220ENST00000598108 CCDC28AQ8IWP9 274 aa16.14■□□□□ 0.17
IRF3-220ENST00000598108 RPH3ALQ9UNE2 315 aa16.14■□□□□ 0.17
IRF3-220ENST00000598108 CXorf1O96002 111 aa16.13■□□□□ 0.17
IRF3-220ENST00000598108 GNG5P63218 68 aa16.13■□□□□ 0.17
IRF3-220ENST00000598108 CMTM2Q8TAZ6 248 aa16.13■□□□□ 0.17
IRF3-220ENST00000598108 TRBV7-9A0A0J9YWB2 115 aa16.12■□□□□ 0.17
IRF3-220ENST00000598108 ZNF345Q14585 488 aa16.12■□□□□ 0.17
IRF3-220ENST00000598108 FAM74A1Q5RGS3 127 aa16.12■□□□□ 0.17
IRF3-220ENST00000598108 GOLT1AQ6ZVE7 132 aa16.12■□□□□ 0.17
IRF3-220ENST00000598108 ARPC5LQ9BPX5 153 aa16.12■□□□□ 0.17
IRF3-220ENST00000598108 AKR1C8PQ5T2L2 129 aa16.11■□□□□ 0.17
IRF3-220ENST00000598108 ST6GAL2Q96JF0 529 aa16.11■□□□□ 0.17
IRF3-220ENST00000598108 LINC00467Q9BRT7 94 aa16.11■□□□□ 0.17
IRF3-220ENST00000598108 NDUFAF3Q9BU61 184 aa16.11■□□□□ 0.17
IRF3-220ENST00000598108 Q6ZNX1 250 aa16.1■□□□□ 0.17
IRF3-220ENST00000598108 ARL6IP6Q8N6S5 226 aa16.1■□□□□ 0.17
IRF3-220ENST00000598108 TMEM167BQ9NRX6 74 aa16.1■□□□□ 0.17
IRF3-220ENST00000598108 TRAV8-1A0A0A6YYK1 113 aa16.09■□□□□ 0.17
IRF3-220ENST00000598108 CTXND1A0A1B0GTU2 59 aa16.09■□□□□ 0.17
IRF3-220ENST00000598108 C11orf72Q8NBR9 251 aa16.09■□□□□ 0.17
IRF3-220ENST00000598108 TMED6Q8WW62 240 aa16.09■□□□□ 0.17
IRF3-220ENST00000598108 TVP23CQ96ET8 276 aa16.09■□□□□ 0.17
IRF3-220ENST00000598108 TMPRSS5Q9H3S3 457 aa16.09■□□□□ 0.17
IRF3-220ENST00000598108 GSN-AS1Q9NRJ2 163 aa16.09■□□□□ 0.17
IRF3-220ENST00000598108 TP53TG3Q9ULZ0 132 aa16.09■□□□□ 0.17
IRF3-220ENST00000598108 A0A0D9SG52 128 aa16.08■□□□□ 0.16
IRF3-220ENST00000598108 CBY3A6NI87 242 aa16.08■□□□□ 0.16
IRF3-220ENST00000598108 GGTLC3B5MD39 225 aa16.08■□□□□ 0.16
IRF3-220ENST00000598108 SUMO1P63165 101 aaKnown RBP16.08■□□□□ 0.16
IRF3-220ENST00000598108 IQCF2Q8IXL9 164 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms