RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 INSP01308 110 aa14.72□□□□□ -0.05
PNKP-211ENST00000598020 IGKV2D-40P01614 121 aaPredicted RBP14.72□□□□□ -0.05
PNKP-211ENST00000598020 LEPP41159 167 aa14.72□□□□□ -0.05
PNKP-211ENST00000598020 SULT1A2P50226 295 aa14.72□□□□□ -0.05
PNKP-211ENST00000598020 NKX2-5P52952 324 aaPredicted RBP14.72□□□□□ -0.05
PNKP-211ENST00000598020 ERCC8Q13216 396 aa14.72□□□□□ -0.05
PNKP-211ENST00000598020 IQCF2Q8IXL9 164 aa14.72□□□□□ -0.05
PNKP-211ENST00000598020 C5orf17Q8NAS9 161 aa14.72□□□□□ -0.05
PNKP-211ENST00000598020 C11orf68Q9H3H3 251 aaKnown RBP14.72□□□□□ -0.05
PNKP-211ENST00000598020 ZNF492Q9P255 531 aa14.72□□□□□ -0.05
PNKP-211ENST00000598020 GOLT1BQ9Y3E0 138 aa14.72□□□□□ -0.05
PNKP-211ENST00000598020 SMIM9A6NGZ8 99 aa14.71□□□□□ -0.05
PNKP-211ENST00000598020 NMBP08949 121 aa14.71□□□□□ -0.05
PNKP-211ENST00000598020 CRISP2P16562 243 aa14.71□□□□□ -0.05
PNKP-211ENST00000598020 TMEM78Q5T7P6 136 aa14.71□□□□□ -0.05
PNKP-211ENST00000598020 Q8NAQ8 132 aa14.71□□□□□ -0.05
PNKP-211ENST00000598020 SFT2D1Q8WV19 159 aa14.71□□□□□ -0.05
PNKP-211ENST00000598020 C20orf144Q9BQM9 153 aa14.71□□□□□ -0.05
PNKP-211ENST00000598020 NKX6-2Q9C056 277 aaPredicted RBP14.71□□□□□ -0.05
PNKP-211ENST00000598020 A0A0J9YWU9 116 aa14.7□□□□□ -0.06
PNKP-211ENST00000598020 SERTM2A0A1B0GWG4 89 aa14.7□□□□□ -0.06
PNKP-211ENST00000598020 GGTLC3B5MD39 225 aa14.7□□□□□ -0.06
PNKP-211ENST00000598020 H2AFB1P0C5Y9 115 aa14.7□□□□□ -0.06
PNKP-211ENST00000598020 SUMO1P63165 101 aaKnown RBP14.7□□□□□ -0.06
PNKP-211ENST00000598020 ARL2-SNX15V9GYD0 113 aa14.7□□□□□ -0.06
PNKP-211ENST00000598020 TRAV12-2A0A075B6T6 113 aa14.69□□□□□ -0.06
PNKP-211ENST00000598020 TRAV1-1A0A0B4J248 108 aa14.69□□□□□ -0.06
PNKP-211ENST00000598020 FAM74A7A6NL05 159 aa14.69□□□□□ -0.06
PNKP-211ENST00000598020 ZNF138P52744 262 aa14.69□□□□□ -0.06
PNKP-211ENST00000598020 TMEM256Q8N2U0 113 aa14.69□□□□□ -0.06
PNKP-211ENST00000598020 YTHDF2Q9Y5A9 579 aaKnown RBP14.69□□□□□ -0.06
PNKP-211ENST00000598020 KLLNB2CW77 178 aa14.68□□□□□ -0.06
PNKP-211ENST00000598020 TCRAP04437 139 aa14.68□□□□□ -0.06
PNKP-211ENST00000598020 EPDR1Q9UM22 224 aa14.68□□□□□ -0.06
PNKP-211ENST00000598020 LENEPQ9Y5L5 61 aa14.68□□□□□ -0.06
PNKP-211ENST00000598020 IGHV4-28A0A0C4DH34 117 aa14.67□□□□□ -0.06
PNKP-211ENST00000598020 RBMY1A1P0DJD3 496 aaKnown RBP14.67□□□□□ -0.06
PNKP-211ENST00000598020 RBMY1CP0DJD4 496 aa14.67□□□□□ -0.06
PNKP-211ENST00000598020 KIR3DS1Q14943 382 aa14.67□□□□□ -0.06
PNKP-211ENST00000598020 RBMY1FQ15415 496 aaKnown RBP14.67□□□□□ -0.06
PNKP-211ENST00000598020 GFI1BQ5VTD9 330 aa14.67□□□□□ -0.06
PNKP-211ENST00000598020 GOLT1AQ6ZVE7 132 aa14.67□□□□□ -0.06
PNKP-211ENST00000598020 BOLA1Q9Y3E2 137 aa14.67□□□□□ -0.06
PNKP-211ENST00000598020 IGHV3OR16-12A0A075B7B8 117 aa14.66□□□□□ -0.06
PNKP-211ENST00000598020 PPT1P50897 306 aa14.66□□□□□ -0.06
PNKP-211ENST00000598020 UBE2G2P60604 165 aa14.66□□□□□ -0.06
PNKP-211ENST00000598020 GNG5P63218 68 aa14.66□□□□□ -0.06
PNKP-211ENST00000598020 ZFAND2AQ8N6M9 145 aa14.66□□□□□ -0.06
PNKP-211ENST00000598020 TMEM208Q9BTX3 173 aa14.66□□□□□ -0.06
PNKP-211ENST00000598020 HBE1P02100 147 aa14.65□□□□□ -0.06
PNKP-211ENST00000598020 CCDC28AQ8IWP9 274 aa14.65□□□□□ -0.06
PNKP-211ENST00000598020 IL17DQ8TAD2 202 aa14.65□□□□□ -0.06
PNKP-211ENST00000598020 TCEAL7Q9BRU2 100 aa14.65□□□□□ -0.06
PNKP-211ENST00000598020 ATG101Q9BSB4 218 aa14.65□□□□□ -0.06
PNKP-211ENST00000598020 RPH3ALQ9UNE2 315 aa14.65□□□□□ -0.06
PNKP-211ENST00000598020 C7orf71A4D174 169 aa14.64□□□□□ -0.07
PNKP-211ENST00000598020 FBLL1A6NHQ2 334 aaKnown RBP14.64□□□□□ -0.07
PNKP-211ENST00000598020 H7BYZ3 331 aa14.64□□□□□ -0.07
PNKP-211ENST00000598020 K7EQM0 130 aa14.64□□□□□ -0.07
PNKP-211ENST00000598020 TAS2R60P59551 318 aa14.64□□□□□ -0.07
PNKP-211ENST00000598020 RRN3P1Q2M238 152 aa14.64□□□□□ -0.07
PNKP-211ENST00000598020 CYB561D1Q8N8Q1 229 aa14.64□□□□□ -0.07
PNKP-211ENST00000598020 Q8TAT8 98 aa14.64□□□□□ -0.07
PNKP-211ENST00000598020 MUC7Q8TAX7 377 aa14.64□□□□□ -0.07
PNKP-211ENST00000598020 HIST1H2BAQ96A08 127 aa14.64□□□□□ -0.07
PNKP-211ENST00000598020 TMEM189A5PLL7 270 aa14.63□□□□□ -0.07
PNKP-211ENST00000598020 TEX46H3BTG2 121 aa14.63□□□□□ -0.07
PNKP-211ENST00000598020 GPX1P07203 203 aa14.63□□□□□ -0.07
PNKP-211ENST00000598020 LINC01587Q99440 93 aa14.63□□□□□ -0.07
PNKP-211ENST00000598020 DEFB4AO15263 64 aa14.62□□□□□ -0.07
PNKP-211ENST00000598020 PAGE4O60829 102 aa14.62□□□□□ -0.07
PNKP-211ENST00000598020 ZNF324O75467 553 aaPredicted RBP14.62□□□□□ -0.07
PNKP-211ENST00000598020 IFNA7P01567 189 aa14.62□□□□□ -0.07
PNKP-211ENST00000598020 PMS2P11Q13670 270 aa14.62□□□□□ -0.07
PNKP-211ENST00000598020 ALKAL2Q6UX46 152 aa14.62□□□□□ -0.07
PNKP-211ENST00000598020 TMEM75Q8N9X5 138 aa14.62□□□□□ -0.07
PNKP-211ENST00000598020 NIPSNAP3BQ9BS92 247 aa14.62□□□□□ -0.07
PNKP-211ENST00000598020 TRAV8-1A0A0A6YYK1 113 aa14.61□□□□□ -0.07
PNKP-211ENST00000598020 TRAV12-3A0A0B4J271 114 aa14.61□□□□□ -0.07
PNKP-211ENST00000598020 A0A1B0GV50 99 aa14.61□□□□□ -0.07
PNKP-211ENST00000598020 C3orf84H3BNL1 204 aa14.61□□□□□ -0.07
PNKP-211ENST00000598020 J3KRW8 73 aa14.61□□□□□ -0.07
PNKP-211ENST00000598020 IGLV2-11P01706 119 aa14.61□□□□□ -0.07
PNKP-211ENST00000598020 CCL20P78556 96 aa14.61□□□□□ -0.07
PNKP-211ENST00000598020 PRR9Q5T870 116 aa14.61□□□□□ -0.07
PNKP-211ENST00000598020 CST9LP1Q5W188 147 aa14.61□□□□□ -0.07
PNKP-211ENST00000598020 LOC102723971A0A1B0GUV8 181 aa14.6□□□□□ -0.07
PNKP-211ENST00000598020 ZNF705GA8MUZ8 300 aaPredicted RBP14.6□□□□□ -0.07
PNKP-211ENST00000598020 PEX7O00628 323 aa14.6□□□□□ -0.07
PNKP-211ENST00000598020 RNASE4P34096 147 aaKnown RBP14.6□□□□□ -0.07
PNKP-211ENST00000598020 BTN1A1Q13410 526 aa14.6□□□□□ -0.07
PNKP-211ENST00000598020 TVP23CQ96ET8 276 aa14.6□□□□□ -0.07
PNKP-211ENST00000598020 PYGO2Q9BRQ0 406 aa14.6□□□□□ -0.07
PNKP-211ENST00000598020 LINC00467Q9BRT7 94 aa14.6□□□□□ -0.07
PNKP-211ENST00000598020 MANBALQ9NQG1 85 aa14.6□□□□□ -0.07
PNKP-211ENST00000598020 PSG8Q9UQ74 426 aa14.6□□□□□ -0.07
PNKP-211ENST00000598020 DNAH7Q8WXX0 4024 aa14.59□□□□□ -0.07
PNKP-211ENST00000598020 F6UZH7 168 aa14.59□□□□□ -0.07
PNKP-211ENST00000598020 ATP5G3P48201 142 aa14.59□□□□□ -0.07
PNKP-211ENST00000598020 FLI1Q01543 452 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms