RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 SSSCA1O60232 199 aa11.84□□□□□ -0.51
PNKP-210ENST00000597965 LINC00305Q7Z4B0 112 aa11.84□□□□□ -0.51
PNKP-210ENST00000597965 SLC7A5P1Q8MH63 180 aa11.84□□□□□ -0.51
PNKP-210ENST00000597965 STOML3Q8TAV4 291 aa11.84□□□□□ -0.51
PNKP-210ENST00000597965 GGACTQ9BVM4 153 aa11.84□□□□□ -0.51
PNKP-210ENST00000597965 PXMP4Q9Y6I8 212 aa11.84□□□□□ -0.51
PNKP-210ENST00000597965 ABCA13Q86UQ4 5058 aa11.83□□□□□ -0.52
PNKP-210ENST00000597965 TAS2R30P59541 319 aa11.83□□□□□ -0.52
PNKP-210ENST00000597965 VAMP2P63027 116 aa11.83□□□□□ -0.52
PNKP-210ENST00000597965 LINC00612Q8N6U2 182 aa11.83□□□□□ -0.52
PNKP-210ENST00000597965 LYRM2Q9NU23 88 aaPredicted RBP11.83□□□□□ -0.52
PNKP-210ENST00000597965 IGSF23A1L1A6 192 aa11.82□□□□□ -0.52
PNKP-210ENST00000597965 ATP6V1G1O75348 118 aa11.82□□□□□ -0.52
PNKP-210ENST00000597965 METTL15P1P0C7V9 234 aa11.82□□□□□ -0.52
PNKP-210ENST00000597965 GUK1Q16774 197 aa11.82□□□□□ -0.52
PNKP-210ENST00000597965 CLLU1Q5K131 121 aa11.82□□□□□ -0.52
PNKP-210ENST00000597965 ALKAL2Q6UX46 152 aa11.82□□□□□ -0.52
PNKP-210ENST00000597965 TMEM14EPQ6UXP3 125 aa11.82□□□□□ -0.52
PNKP-210ENST00000597965 TMEM252Q8N6L7 170 aa11.82□□□□□ -0.52
PNKP-210ENST00000597965 PHYHIPLQ96FC7 376 aa11.82□□□□□ -0.52
PNKP-210ENST00000597965 SLC25A31Q9H0C2 315 aa11.82□□□□□ -0.52
PNKP-210ENST00000597965 MRPS12O15235 138 aaKnown RBP11.81□□□□□ -0.52
PNKP-210ENST00000597965 COX7A2P2O60397 106 aa11.81□□□□□ -0.52
PNKP-210ENST00000597965 TPT1P13693 172 aaKnown RBP11.81□□□□□ -0.52
PNKP-210ENST00000597965 LEPP41159 167 aa11.81□□□□□ -0.52
PNKP-210ENST00000597965 NHLH2Q02577 135 aa11.81□□□□□ -0.52
PNKP-210ENST00000597965 SLC38A11Q08AI6 406 aa11.81□□□□□ -0.52
PNKP-210ENST00000597965 RAB31Q13636 194 aa11.81□□□□□ -0.52
PNKP-210ENST00000597965 RPL7L1Q6DKI1 246 aaKnown RBP11.81□□□□□ -0.52
PNKP-210ENST00000597965 PATE2Q6UY27 113 aa11.81□□□□□ -0.52
PNKP-210ENST00000597965 ODF3Q96PU9 254 aa11.81□□□□□ -0.52
PNKP-210ENST00000597965 PYGO2Q9BRQ0 406 aa11.81□□□□□ -0.52
PNKP-210ENST00000597965 WFDC1Q9HC57 220 aa11.81□□□□□ -0.52
PNKP-210ENST00000597965 SCRT2Q9NQ03 307 aa11.81□□□□□ -0.52
PNKP-210ENST00000597965 MRPS16Q9Y3D3 137 aaKnown RBP11.81□□□□□ -0.52
PNKP-210ENST00000597965 GAGE12BA1L429 117 aa11.8□□□□□ -0.52
PNKP-210ENST00000597965 AGPAT2O15120 278 aa11.8□□□□□ -0.52
PNKP-210ENST00000597965 GAGE7O76087 117 aa11.8□□□□□ -0.52
PNKP-210ENST00000597965 GAGE12FP0CL80 117 aa11.8□□□□□ -0.52
PNKP-210ENST00000597965 GAGE12GP0CL81 117 aa11.8□□□□□ -0.52
PNKP-210ENST00000597965 GAGE12IP0CL82 117 aa11.8□□□□□ -0.52
PNKP-210ENST00000597965 CAV2P51636 162 aa11.8□□□□□ -0.52
PNKP-210ENST00000597965 DAZ2Q13117 558 aaKnown RBP11.8□□□□□ -0.52
PNKP-210ENST00000597965 GFI1BQ5VTD9 330 aa11.8□□□□□ -0.52
PNKP-210ENST00000597965 Q6ZRG5 221 aa11.8□□□□□ -0.52
PNKP-210ENST00000597965 SMIM3Q9BZL3 60 aa11.8□□□□□ -0.52
PNKP-210ENST00000597965 A0A0J9YY99 117 aa11.79□□□□□ -0.52
PNKP-210ENST00000597965 LINC00862A6NCI5 91 aa11.79□□□□□ -0.52
PNKP-210ENST00000597965 EIF5AP63241 154 aaKnown RBP11.79□□□□□ -0.52
PNKP-210ENST00000597965 C10orf113Q5VZT2 155 aa11.79□□□□□ -0.52
PNKP-210ENST00000597965 LRP1BQ9NZR2 4599 aa11.78□□□□□ -0.52
PNKP-210ENST00000597965 RAB14P61106 215 aa11.78□□□□□ -0.52
PNKP-210ENST00000597965 BAXQ07812 192 aa11.78□□□□□ -0.52
PNKP-210ENST00000597965 ESRGQ1W209 222 aa11.78□□□□□ -0.52
PNKP-210ENST00000597965 PCNPQ8WW12 178 aaKnown RBP11.78□□□□□ -0.52
PNKP-210ENST00000597965 TRGV2A0A075B6R0 118 aa11.77□□□□□ -0.53
PNKP-210ENST00000597965 EREGO14944 169 aa11.77□□□□□ -0.53
PNKP-210ENST00000597965 NMBP08949 121 aa11.77□□□□□ -0.53
PNKP-210ENST00000597965 HOXA5P20719 270 aa11.77□□□□□ -0.53
PNKP-210ENST00000597965 OR1L4Q8NGR5 311 aa11.77□□□□□ -0.53
PNKP-210ENST00000597965 C18orf15Q96N68 181 aa11.77□□□□□ -0.53
PNKP-210ENST00000597965 PFDN5Q99471 154 aa11.77□□□□□ -0.53
PNKP-210ENST00000597965 DNAJC4Q9NNZ3 241 aa11.77□□□□□ -0.53
PNKP-210ENST00000597965 BORCS7-ASMTA0A0B4J1R7 106 aa11.76□□□□□ -0.53
PNKP-210ENST00000597965 ZNF253O75346 499 aa11.76□□□□□ -0.53
PNKP-210ENST00000597965 CST7O76096 145 aa11.76□□□□□ -0.53
PNKP-210ENST00000597965 SLC25A5P05141 298 aaKnown RBP11.76□□□□□ -0.53
PNKP-210ENST00000597965 IGLC2P0DOY2 106 aa11.76□□□□□ -0.53
PNKP-210ENST00000597965 SULT1A1P50225 295 aa11.76□□□□□ -0.53
PNKP-210ENST00000597965 FAM74A1Q5RGS3 127 aa11.76□□□□□ -0.53
PNKP-210ENST00000597965 KRTAP1-5Q9BYS1 174 aa11.76□□□□□ -0.53
PNKP-210ENST00000597965 TRAV12-3A0A0B4J271 114 aa11.75□□□□□ -0.53
PNKP-210ENST00000597965 NPIPB6E9PJ23 425 aa11.75□□□□□ -0.53
PNKP-210ENST00000597965 ARL16Q0P5N6 197 aa11.75□□□□□ -0.53
PNKP-210ENST00000597965 KIR3DS1Q14943 382 aa11.75□□□□□ -0.53
PNKP-210ENST00000597965 TMED6Q8WW62 240 aa11.75□□□□□ -0.53
PNKP-210ENST00000597965 TMEM37Q8WXS4 190 aa11.75□□□□□ -0.53
PNKP-210ENST00000597965 MRPL53Q96EL3 112 aaKnown RBP11.75□□□□□ -0.53
PNKP-210ENST00000597965 SAT2Q96F10 170 aaPredicted RBP11.75□□□□□ -0.53
PNKP-210ENST00000597965 TMPRSS5Q9H3S3 457 aa11.75□□□□□ -0.53
PNKP-210ENST00000597965 PGPEP1Q9NXJ5 209 aa11.75□□□□□ -0.53
PNKP-210ENST00000597965 ZNF586Q9NXT0 402 aa11.75□□□□□ -0.53
PNKP-210ENST00000597965 PRAC2D3DTV9 90 aa11.74□□□□□ -0.53
PNKP-210ENST00000597965 J3KRW8 73 aa11.74□□□□□ -0.53
PNKP-210ENST00000597965 SLC17A3O00476 420 aa11.74□□□□□ -0.53
PNKP-210ENST00000597965 CT45A10P0DMU9 189 aa11.74□□□□□ -0.53
PNKP-210ENST00000597965 CAMLGP49069 296 aa11.74□□□□□ -0.53
PNKP-210ENST00000597965 STX12Q86Y82 276 aa11.74□□□□□ -0.53
PNKP-210ENST00000597965 OR5C1Q8NGR4 320 aa11.74□□□□□ -0.53
PNKP-210ENST00000597965 PARD6GQ9BYG4 376 aaPredicted RBP11.74□□□□□ -0.53
PNKP-210ENST00000597965 SIVA1O15304 175 aa11.73□□□□□ -0.53
PNKP-210ENST00000597965 SNRPCP09234 159 aaKnown RBP11.73□□□□□ -0.53
PNKP-210ENST00000597965 KRTAP10-2P60368 255 aa11.73□□□□□ -0.53
PNKP-210ENST00000597965 EIF5AL1Q6IS14 154 aaKnown RBP11.73□□□□□ -0.53
PNKP-210ENST00000597965 CDPF1Q6NVV7 123 aa11.73□□□□□ -0.53
PNKP-210ENST00000597965 Q6ZTI0 123 aa11.73□□□□□ -0.53
PNKP-210ENST00000597965 MGST2Q99735 147 aa11.73□□□□□ -0.53
PNKP-210ENST00000597965 LINC00467Q9BRT7 94 aa11.73□□□□□ -0.53
PNKP-210ENST00000597965 MED9Q9NWA0 146 aa11.73□□□□□ -0.53
PNKP-210ENST00000597965 H3BQ15 152 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms