RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 ZNF324O75467 553 aaPredicted RBP10.57□□□□□ -0.72
LIG1-215ENST00000597901 IFNA5P01569 189 aa10.57□□□□□ -0.72
LIG1-215ENST00000597901 OR10J4P0C629 311 aa10.57□□□□□ -0.72
LIG1-215ENST00000597901 PET100P0DJ07 73 aa10.57□□□□□ -0.72
LIG1-215ENST00000597901 RNASE4P34096 147 aaKnown RBP10.57□□□□□ -0.72
LIG1-215ENST00000597901 CD300CQ08708 224 aa10.57□□□□□ -0.72
LIG1-215ENST00000597901 FAM122CQ6P4D5 195 aa10.57□□□□□ -0.72
LIG1-215ENST00000597901 LINC00612Q8N6U2 182 aa10.57□□□□□ -0.72
LIG1-215ENST00000597901 VGLL1Q99990 258 aa10.57□□□□□ -0.72
LIG1-215ENST00000597901 C7orf71A4D174 169 aa10.56□□□□□ -0.72
LIG1-215ENST00000597901 SNURFLB1AK76 121 aa10.56□□□□□ -0.72
LIG1-215ENST00000597901 KLLNB2CW77 178 aa10.56□□□□□ -0.72
LIG1-215ENST00000597901 RTL8CO15255 209 aa10.56□□□□□ -0.72
LIG1-215ENST00000597901 NUDT3O95989 172 aa10.56□□□□□ -0.72
LIG1-215ENST00000597901 FFAR4Q5NUL3 377 aa10.56□□□□□ -0.72
LIG1-215ENST00000597901 Q6ZR54 194 aa10.56□□□□□ -0.72
LIG1-215ENST00000597901 ZNF503Q96F45 646 aa10.56□□□□□ -0.72
LIG1-215ENST00000597901 WFDC1Q9HC57 220 aa10.56□□□□□ -0.72
LIG1-215ENST00000597901 MBD2Q9UBB5 411 aa10.56□□□□□ -0.72
LIG1-215ENST00000597901 IGKV2-40A0A087WW87 121 aaPredicted RBP10.55□□□□□ -0.72
LIG1-215ENST00000597901 GAGE12BA1L429 117 aa10.55□□□□□ -0.72
LIG1-215ENST00000597901 GAGE7O76087 117 aa10.55□□□□□ -0.72
LIG1-215ENST00000597901 IGKV2D-40P01614 121 aaPredicted RBP10.55□□□□□ -0.72
LIG1-215ENST00000597901 GPX1P07203 203 aa10.55□□□□□ -0.72
LIG1-215ENST00000597901 NMBP08949 121 aa10.55□□□□□ -0.72
LIG1-215ENST00000597901 GAGE12FP0CL80 117 aa10.55□□□□□ -0.72
LIG1-215ENST00000597901 GAGE12GP0CL81 117 aa10.55□□□□□ -0.72
LIG1-215ENST00000597901 GAGE12IP0CL82 117 aa10.55□□□□□ -0.72
LIG1-215ENST00000597901 CRISP2P16562 243 aa10.55□□□□□ -0.72
LIG1-215ENST00000597901 FAM3BP58499 235 aaPredicted RBP10.55□□□□□ -0.72
LIG1-215ENST00000597901 RANP62826 216 aaKnown RBP10.55□□□□□ -0.72
LIG1-215ENST00000597901 DAZ2Q13117 558 aaKnown RBP10.55□□□□□ -0.72
LIG1-215ENST00000597901 BTN1A1Q13410 526 aa10.55□□□□□ -0.72
LIG1-215ENST00000597901 OR5I1Q13606 314 aa10.55□□□□□ -0.72
LIG1-215ENST00000597901 TMEM78Q5T7P6 136 aa10.55□□□□□ -0.72
LIG1-215ENST00000597901 LINC00467Q9BRT7 94 aa10.55□□□□□ -0.72
LIG1-215ENST00000597901 ATG101Q9BSB4 218 aa10.55□□□□□ -0.72
LIG1-215ENST00000597901 ZNF492Q9P255 531 aa10.55□□□□□ -0.72
LIG1-215ENST00000597901 OR7C2O60412 319 aa10.54□□□□□ -0.72
LIG1-215ENST00000597901 PHYHIPLQ96FC7 376 aa10.54□□□□□ -0.72
LIG1-215ENST00000597901 ALG5Q9Y673 324 aa10.54□□□□□ -0.72
LIG1-215ENST00000597901 DNAH2Q9P225 4427 aa10.53□□□□□ -0.72
LIG1-215ENST00000597901 PRSS29PA6NIE9 313 aa10.53□□□□□ -0.72
LIG1-215ENST00000597901 ZNF138P52744 262 aa10.53□□□□□ -0.72
LIG1-215ENST00000597901 ANXA2RQ3ZCQ2 193 aa10.53□□□□□ -0.72
LIG1-215ENST00000597901 LYPD1Q8N2G4 141 aa10.53□□□□□ -0.72
LIG1-215ENST00000597901 EIF4E3Q8N5X7 224 aaKnown RBP10.53□□□□□ -0.72
LIG1-215ENST00000597901 ZFAND2AQ8N6M9 145 aa10.53□□□□□ -0.72
LIG1-215ENST00000597901 GSN-AS1Q9NRJ2 163 aa10.53□□□□□ -0.72
LIG1-215ENST00000597901 DNAH17Q9UFH2 4485 aa10.52□□□□□ -0.72
LIG1-215ENST00000597901 A0A1B0GVY2 172 aa10.52□□□□□ -0.73
LIG1-215ENST00000597901 EIF3GO75821 320 aaKnown RBP eCLIP10.52□□□□□ -0.73
LIG1-215ENST00000597901 HOXA5P20719 270 aa10.52□□□□□ -0.73
LIG1-215ENST00000597901 CSN1S1P47710 185 aa10.52□□□□□ -0.73
LIG1-215ENST00000597901 CCL18P55774 89 aa10.52□□□□□ -0.73
LIG1-215ENST00000597901 SOHLH1Q5JUK2 328 aa10.52□□□□□ -0.73
LIG1-215ENST00000597901 Q6ZQT7 251 aa10.52□□□□□ -0.73
LIG1-215ENST00000597901 Q6ZTI0 123 aa10.52□□□□□ -0.73
LIG1-215ENST00000597901 C11orf72Q8NBR9 251 aa10.52□□□□□ -0.73
LIG1-215ENST00000597901 Q9H3A6 140 aa10.52□□□□□ -0.73
LIG1-215ENST00000597901 TRAV26-1A0A087WT03 109 aa10.51□□□□□ -0.73
LIG1-215ENST00000597901 M6PRP20645 277 aa10.51□□□□□ -0.73
LIG1-215ENST00000597901 TAS2R45P59539 299 aa10.51□□□□□ -0.73
LIG1-215ENST00000597901 UBE2L3P68036 154 aaKnown RBP10.51□□□□□ -0.73
LIG1-215ENST00000597901 PRR9Q5T870 116 aa10.51□□□□□ -0.73
LIG1-215ENST00000597901 ZNF680Q8NEM1 530 aa10.51□□□□□ -0.73
LIG1-215ENST00000597901 ZNRF2Q8NHG8 242 aa10.51□□□□□ -0.73
LIG1-215ENST00000597901 GNPNAT1Q96EK6 184 aaPredicted RBP10.51□□□□□ -0.73
LIG1-215ENST00000597901 LINC00588Q9Y4M8 146 aa10.51□□□□□ -0.73
LIG1-215ENST00000597901 KLF12Q9Y4X4 402 aa10.51□□□□□ -0.73
LIG1-215ENST00000597901 TRBV7-9A0A0J9YWB2 115 aa10.5□□□□□ -0.73
LIG1-215ENST00000597901 A0A0J9YY99 117 aa10.5□□□□□ -0.73
LIG1-215ENST00000597901 RBAKDNA6NC62 111 aa10.5□□□□□ -0.73
LIG1-215ENST00000597901 ACOT6Q3I5F7 207 aaPredicted RBP10.5□□□□□ -0.73
LIG1-215ENST00000597901 KHDC3LQ587J8 217 aa10.5□□□□□ -0.73
LIG1-215ENST00000597901 C1orf134Q5TEV5 83 aa10.5□□□□□ -0.73
LIG1-215ENST00000597901 RXFP4Q8TDU9 374 aa10.5□□□□□ -0.73
LIG1-215ENST00000597901 MED28Q9H204 178 aa10.5□□□□□ -0.73
LIG1-215ENST00000597901 TP53TG3Q9ULZ0 132 aa10.5□□□□□ -0.73
LIG1-215ENST00000597901 IGHV1OR15-1A0A075B7D0 117 aa10.49□□□□□ -0.73
LIG1-215ENST00000597901 A0A1W2PPV4 95 aa10.49□□□□□ -0.73
LIG1-215ENST00000597901 PGPA6NDG6 321 aa10.49□□□□□ -0.73
LIG1-215ENST00000597901 DIRC3C9JPN6 131 aa10.49□□□□□ -0.73
LIG1-215ENST00000597901 RGS13O14921 159 aa10.49□□□□□ -0.73
LIG1-215ENST00000597901 PTTG1O95997 202 aa10.49□□□□□ -0.73
LIG1-215ENST00000597901 SSX7Q7RTT5 188 aa10.49□□□□□ -0.73
LIG1-215ENST00000597901 Q8TAT8 98 aa10.49□□□□□ -0.73
LIG1-215ENST00000597901 C18orf15Q96N68 181 aa10.49□□□□□ -0.73
LIG1-215ENST00000597901 TMPRSS5Q9H3S3 457 aa10.49□□□□□ -0.73
LIG1-215ENST00000597901 FAT2Q9NYQ8 4349 aa10.49□□□□□ -0.73
LIG1-215ENST00000597901 TRGV2A0A075B6R0 118 aa10.48□□□□□ -0.73
LIG1-215ENST00000597901 TRGV1A0A0A0MS02 117 aa10.48□□□□□ -0.73
LIG1-215ENST00000597901 H3BNG1 76 aa10.48□□□□□ -0.73
LIG1-215ENST00000597901 SPINK4O60575 86 aa10.48□□□□□ -0.73
LIG1-215ENST00000597901 TCL1AP56279 114 aa10.48□□□□□ -0.73
LIG1-215ENST00000597901 RAB2AP61019 212 aa10.48□□□□□ -0.73
LIG1-215ENST00000597901 ZNF266Q14584 549 aa10.48□□□□□ -0.73
LIG1-215ENST00000597901 OR10G4Q8NGN3 311 aa10.48□□□□□ -0.73
LIG1-215ENST00000597901 OR10G9Q8NGN4 311 aa10.48□□□□□ -0.73
LIG1-215ENST00000597901 OR10G7Q8NGN6 311 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms